Cottoperca gobio: 115028207
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Entry
115028207 CDS
T07513
Symbol
dcp1b
Name
(RefSeq) mRNA-decapping enzyme 1B
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
cgob
Cottoperca gobio
Pathway
cgob03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115028207 (dcp1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgob03019
]
115028207 (dcp1b)
Messenger RNA biogenesis [BR:
cgob03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
115028207 (dcp1b)
mRNA degradation factors
5'-3' decay
Decapping complex
115028207 (dcp1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
WH1
Motif
Other DBs
NCBI-GeneID:
115028207
NCBI-ProteinID:
XP_029317626
Ensembl:
ENSCGOG00000022673
UniProt:
A0A6J2S4S2
LinkDB
All DBs
Position
23:5787217..5798848
Genome browser
AA seq
683 aa
AA seq
DB search
MTATSAGSSSCLTAKGLDISLAALQRQDPYINDIVDVASQVALYTYNNRSNEWEKTEVEG
TLFIYTRLASPRHGFTIMNRLSMENLTEPITKDLDFQLQHPFLLYRNARLVIHGIWFYDK
EDCQRIAQRMKILTQQEQVLAQSQGGWLSPGGRGGVIAGGVLGGRGRVIAGGVLGRRGGG
GGGVVGGREAKAVDIIQMLTKARTEYDKSTSEPKEIGGSSVIYGNPNLIKPIPVKPNTQD
SESAAPKSLSLATLFGSHHHQKSKPDPVSIMAAPGTGPSTGKVARPPVARSLKYDNTVNS
SKSVPSKGANVAMVGCSDGGLRAVIGGQIVGEHGGNVVVGLLPSPTTAQQQQQSQPQHCP
AIQKLMQGQRGVGVVGGVLQTVSESPENRLCDNGVPLEHHHHHHHMYHHHHQQHHLHHHQ
QLQADPIKRHFQTPPSSNVPPLQQISHHPSQPVMVDAVSCSHLQAQQSQQLFYSLSKPPA
EAQHTSHSALTIQGTGLLPSQVTNDQVLHPLQGLSSHMSGVVSPHDLLQKLQLIQQEQSL
TSHDPPRPSPGLAPRFLGPTQGQGAGSVVGPNQATATAGQKAALQFQVISPQRIPATVAP
NLLLSPSMFTQAKSSGGFAAVSQESCPAPSPLSRPPLQQEIRVLTRNHLQATLLHLIQTD
SSFLDTIYEAYISRFSNDSSSKY
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgacagcgacttctgcaggtagcagcagctgcctcaccgctaaaggactggacataagt
ctggctgctctgcagcgacaagacccatacattaatgacatcgtggacgtggccagccaa
gttgccctgtatacttataacaacaggtcaaatgagtgggagaagactgaggtggaaggc
accctttttatctacacaagattggcttctcccaggcatggtttcaccattatgaacaga
ctcagtatggagaacttgacagagccaatcaccaaagacctggacttccagctgcagcac
cccttcctgctttaccgcaatgcacgattggttatccatggcatttggttctatgataag
gaggactgtcaacgcattgctcagaggatgaagattctgacccagcaggagcaggtcctg
gctcagtctcagggtggatggttgtcaccaggaggaagaggaggagtcattgcaggagga
gtacttggaggaagaggaagagtcattgcaggaggagtacttggaagaagaggaggagga
ggaggaggagttgttggaggaagagaagcaaaggcagtggacatcatccaaatgttgacc
aaagcacgcacagagtatgacaagtctacgtcagagccaaaggagatcggtggcagcagt
gttatttatggaaaccccaacctgatcaaaccaatacccgttaaaccgaacactcaggac
agtgaaagtgcagcacccaagtctctctctctggccactctctttggctctcaccatcac
cagaaatccaaacctgacccagtctctataatggcggcgcctgggacagggccatcaaca
ggaaaagtcgctcgtccacctgtagcccgttcgctgaaatacgacaatacggttaactct
tccaaaagtgtgccctccaagggagcgaacgtcgccatggttgggtgttcagatggaggg
ctcagggctgtgattggaggacaaatagttggggaacatggtggaaatgttgttgtgggc
ttgctgccgagtcccactaccgcccagcagcagcagcagagccagcctcagcactgccca
gccatccagaaactcatgcagggacagagaggagtcggggtggtgggaggagtgcttcag
accgtgtccgagtccccagagaacaggctgtgtgacaacggggtgccgctggagcatcac
caccaccatcaccatatgtaccaccatcatcatcagcagcaccaccttcatcatcaccag
cagcttcaagctgacccaatcaagagacatttccaaacgccgccctcctccaatgttcct
cctctgcagcagatctcccatcacccctctcagcccgtaatggtggatgctgtgtcatgc
tctcaccttcaagcacaacaaagccagcagctgttttacagcctctctaaacctccagca
gaggcacagcacaccagccactcggctttaactatacagggaacaggtttgctgccatct
caggtgacaaatgaccaagtccttcatcctttacaaggtctgtcttcccacatgtctggt
gtagtgtcgcctcatgatctcctgcaaaagctccagctgatccagcaggagcaaagccta
acttcccatgatccccctcgaccctctccaggactggcccctcgattcctggggcccact
caaggtcaaggtgcaggctcagttgtaggcccaaatcaggccacagccactgcgggtcaa
aaggctgcgctgcagtttcaggttatctccccccagcggatacctgccactgtggccccc
aacctgctcctctctcccagtatgttcactcaggcaaagtctagtggtgggtttgcagcg
gtttcccaggagagctgccctgccccctcgcccctgtccagacccccactgcagcaggag
atcagagttttgaccaggaaccatcttcaagccacactgctgcatctgatccagactgac
agctcgttcctggacaccatctatgaagcctacatcagccgcttttctaatgactccagc
agcaagtactga
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