Cottoperca gobio: 115028228
Help
Entry
115028228 CDS
T07513
Name
(RefSeq) transcription intermediary factor 1-alpha-like isoform X1
KO
K08881
tripartite motif-containing protein 24 [EC:
2.3.2.27
]
Organism
cgob
Cottoperca gobio
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cgob01001
]
115028228
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgob04121
]
115028228
Enzymes [BR:
cgob01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115028228
Protein kinases [BR:
cgob01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
115028228
Ubiquitin system [BR:
cgob04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
115028228
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_UBOX
zf-RING_5
zf-C3HC4_2
PHD-1st_NSD
zf-C3HC4
zf-RING_2
FemAB_like
DUF7217
DUF7615
Motif
Other DBs
NCBI-GeneID:
115028228
NCBI-ProteinID:
XP_029317685
Ensembl:
ENSCGOG00000023917
UniProt:
A0A6J2S7U7
LinkDB
All DBs
Position
23:11976522..11988160
Genome browser
AA seq
1159 aa
AA seq
DB search
MDESAENVDNDDFVIIVENEAESLPAEEERLKQQGTFGLMDTCPICKLSFHNREPKLLPC
LHSFCKRCLPAPFRSADPRRDSQVHVDNKSLGAIRCPVCRQECWEMDMLDNFFVKDSAEV
PSSTVEKTSQVCMSCDDNTEATGYCVECVEFLCVTCIEAHQRVKFTRDHTIRQKEEMSPE
ALGVSTQKPVFCDVHKQEPLKLFCETCDRLTCRDCQLLKHKDHNYQFLEDAYRNHKQYLE
NMTQQLQEKRKAIEDVSGCISTGLQQVEENRKAVTNEIKKSICSLIMEINRKGKILVNQL
EALTKDHELGLKKQQEDVHSLSRHLDHVINFTKWATASQSGTALLYCKRLILFQIHYLMR
ASCNPSIVPQSSVRFQCRSGFWATNVDLGSLVVERGPGSRPPITNLQAGPRPEPPTGALS
ASAQQRQSTLAQLQMQTSVIPLSKVDKLTQQPQRQPPPNHWSWYQNVRLPGPPGPPPPTR
PIHGGSSPSQGPPNLGQQQQQGQQGQQGHQGRRYGSSHPNPRSPTSSMLHNTGFPPAQSL
RDLIHGSSFPPKPMDVMQGTSRYPQPLPTGAAAHMSLHQRGLTESTYLKRNDAGASAPSI
TISIPKPSFAQSQASATSEKISTFNHIAVQARQNSPMAKPSSSDRSTGTTSWRQTSEPPS
APSAKRRRRSSPGPVIVIKDEPEDEDEVRFVQSSLPDSSTGGQSIPLQQLKVSVPVPVPE
SGKEQHPQPAAQPESEKRAEPDEDPNEDWCAVCQNGGELLCCDKCPKVFHLACHIPALNE
SPSGEWFCSLCRDLASPEMEYACNSKDHPVSDIFPPLERRRCERLLLRLFCNDFSTDFQQ
SATPSETRRYKELIKTPMDLSIVKKKLESKMREGECYNGPHGFVADVRLIFFNCAKYYKA
LQATSELGSAGLYLEDYFEEQLKLVYPDRVFPGGREEQMIPPLEDEIEEEEEMMEEGMAP
IEDDKPQSPAGEGIPPVEEEVPPVEEEVPPVVEEEVPPVVEEDLPPVVEEDLPPVVEEDL
PPVVEEDLPPVEEEVPPVVEEEVPPVEEEVPPLDEPTAPAEEEKEEKSETEEKVIEMTEK
VTDAKPAAAEGDVPPCEDAKQDEETPAMEVESSPAVDSETKDEIAPSSSKEEIPPDTTVD
PPETQEKSSAPADTAKEEE
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaagcgccgaaaatgttgacaacgacgactttgtcattatcgtggaaaacgag
gcagaaagtttgccagccgaggaagaaaggctgaaacagcaaggcaccttcgggctcatg
gacacctgtccaatctgcaagttgagcttccacaacagagagcccaaacttctgccgtgt
cttcactctttctgcaagaggtgtctccctgcccccttcaggagtgctgacccgaggcgt
gactcgcaagttcatgtcgacaacaaatcattgggtgccattcgatgtccagtatgcaga
caggaatgctgggagatggacatgttggataatttctttgttaaggattctgctgaggtg
ccgagcagcaccgtggagaaaaccagccaggtgtgtatgagctgcgatgacaacacagaa
gcaacaggttactgcgtggagtgtgtggagtttctgtgtgtgacatgtattgaggcgcac
caaagggtcaagttcaccagggatcacaccatacgccagaaggaggagatgtctccagaa
gcattaggtgtctccacacagaagcctgtgttttgtgacgtccacaagcaggagccactg
aagctgttctgtgagacgtgtgaccgacttacctgtcgggattgtcagctgcttaagcac
aaggatcacaactaccagtttttggaggatgcgtacaggaaccacaagcagtatttggag
aacatgacgcagcagttgcaagagaaaagaaaggccatcgaggacgtgtccggctgtatc
agcactggactccagcaagtggaagaaaaccggaaggctgtcacaaatgaaataaagaag
tccatctgtagcttgattatggagattaaccggaagggaaagattctagttaaccagctc
gaggctctgactaaggaccacgagctgggtttaaaaaagcagcaagaagacgtccactcc
ctgagcaggcacctcgatcatgtcatcaactttaccaaatgggctacagccagccaaagt
ggaacagccctgctgtactgcaagagactgatcctttttcagatccattacctgatgaga
gcaagctgtaatccctcaatcgtcccccagagttctgttcgctttcagtgtcgctctggt
ttctgggccacaaatgtagaccttggttctctggttgtagaaaggggccctggcagccgg
ccgcccatcaccaacctccaggccggtcccagaccagagccccccactggagcgctctca
gcctcggctcagcagcgacagagcacgctggctcagcttcagatgcagacatctgttatt
cctctgtccaaggtggacaagcttacccagcagccccagagacagccccctcctaaccac
tggtcttggtaccaaaatgtcaggctcccaggaccccccggtcctccacccccaaccaga
cccatccacggagggtcctccccctcccaaggcccccccaacttgggacagcagcaacag
cagggacagcaggggcagcagggacatcagggacgcagatatgggagctcccaccctaac
cccagaagccccacatcatccatgcttcacaacacaggattcccacctgctcagtctctg
agagatttgatccatggctccagtttccctcctaaacccatggatgtgatgcaggggacg
tcccgctacccacagcctctgcctactggagcagctgcacatatgtctctacatcagcgg
ggcctcacggagtccacctacctaaagaggaatgacgctggtgcatctgccccctccatc
accatctctattcccaaacccagcttcgctcaaagtcaagcttcagcaacttcagaaaaa
ataagcacctttaaccacatagcagttcaagcgaggcagaactccccgatggccaaacct
tcttcttcagacagaagcacggggacgacttcctggaggcagacttcagagccgccgtct
gccccctcagccaagcgacggagaaggtcatccccggggcccgtcatcgtcatcaaagac
gaacctgaggatgaagatgaagttcgatttgtgcagtccagcctgccagacagcagcacc
ggcggtcagtcgatccctctgcagcagctaaaggtgtctgtcccagtcccggtccctgag
tctgggaaagagcagcatccgcagcccgcagcacagccagagtctgagaagagagcggag
ccggacgaagatcctaatgaggactggtgcgccgtctgtcagaacggaggggagctgctc
tgttgcgacaaatgtcccaaagtctttcatctggcctgccacattcccgcgctgaatgag
tcccctagtggggagtggttctgttcgctctgccgagacctcgcctcccctgagatggag
tacgcctgtaacagcaaggaccaccccgtctccgacatattcccacctcttgaaagaagg
aggtgtgagaggctgctactacgtctgttctgcaatgacttcagcactgacttccagcag
tccgctactccatcagagacaagacgatacaaggagctgatcaagaccccgatggatttg
tcaatagtcaaaaagaaactggagtcgaagatgcgggaaggtgaatgttataacggtccg
catgggtttgtcgcagacgtccggctcatatttttcaactgtgcaaagtactacaaggct
ttacaggcgacctcagaactgggcagtgcaggcttatacttggaggattactttgaggag
cagttgaaactagtctacccagatagagtcttccccggagggagggaagagcagatgatc
cctcctttggaggacgagatagaggaagaggaagagatgatggaggaaggcatggctccc
attgaagacgataaaccacaaagtcctgcaggagaaggaatccctcctgtggaggaggaa
gtgcctcctgtggaggaggaagtgcctcctgtggtggaggaggaagtgcctcctgtggtg
gaggaggatttgcctcctgtggtggaggaggatttgcctcctgtggtggaggaggatttg
cctcctgtggtggaggaggatttgcctcctgtggaggaggaagtgcctcctgtggtggag
gaggaagtgcctcctgtggaggaggaagtgcctcctctagatgaaccgacagccccggct
gaggaagaaaaggaagaaaagtctgaaacggaggaaaaggtaattgaaatgactgaaaag
gtgactgatgcaaagccagcagccgcggagggagacgtgcctccctgcgaggatgcaaag
caggacgaggagactcctgcgatggaggtggaaagctctccagctgtcgacagtgaaaca
aaagacgaaatagctcccagctcttcaaaagaggagatccctccagacacgactgttgat
cctcctgaaacccaggagaagagctcagctcctgcagacacagccaaagaggaggagtga
DBGET
integrated database retrieval system
