Cottoperca gobio: 115028259
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Entry
115028259 CDS
T07513
Symbol
sox5
Name
(RefSeq) transcription factor SOX-5 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
cgob
Cottoperca gobio
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgob03000
]
115028259 (sox5)
Transcription factors [BR:
cgob03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
115028259 (sox5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
115028259
NCBI-ProteinID:
XP_029317759
Ensembl:
ENSCGOG00000016671
UniProt:
A0A6J2S720
LinkDB
All DBs
Position
23:10609394..10691009
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AA seq
786 aa
AA seq
DB search
MLLLTRDADPYSSMLTEPELPQECNRMSSKRPASPYGGTDGEVTMTTSRQRMDDEDSEGP
GGVIHLPLASYCGKVSPRSPHNRNLDSPPTWSRMALSGSSLSPYPQHNATSPGKEDGGGR
PCSDGGLAAGTLGTPERRKGSLADVVDTLKQRKMEQLIKNEPEEAPSIERLLSKDWKDKL
LAMGSGHIGEIKGTADSLAEKERQLMGMIGQLSSLREQLLAAHEDQKKLAASQMEKQRQQ
MELAKQQQDQIARQQQQLLQQQHKINLLQQQIQQVQGQLPPLMIPVFPPDQRTLAAAAAQ
QGFLMPSGFSYKPGCSDPYPLQLIPTTMAAAAAAAAATPGLGPLQLQQLYAAQLAAMQVS
PGGKQHGGSLPPQGNLRTHSPPTNMHSQSEKGRNSPLPNKAKDSEGAQPLNLSAKPKASE
SKSPNSPPTSPQVAAAAAAAKLGPAMKHSIAASSIGGPPTRVSSIADLLSSLSTTAYLND
HEAVTKAFAEARQMKEQLKREQQVLDAKVAAVSNLSLNNGRSDKDKAALESLSQQLKQQA
EDKFSHAMLDFTMSGDSDGSPSVSDSRIFREARGRGTAEPHIKRPMNAFMVWAKDERRKI
LQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCL
VDGKKLRIGEYKAIMRSRRQEMRQYFSVGQQGQMPLSSAGVVYPGALSMAGIPSPQMPSE
HSSMSSSPEPNANHHQNPHMAGLKEEPRIKQEELRLDDSNGDVYDDFEYEDEEADYTSDN
ENRITQ
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgttgttgttgacgagagacgcggacccttactccagcatgctcactgagcctgagcta
cctcaggagtgtaacaggatgtcttccaagcgaccagcctctccatatggggggacagat
ggagaggtaaccatgacaaccagcagacagcgaatggatgatgaggatagtgagggaccg
ggcggtgtcatccacctgcccctggcctcctactgcggcaaggtgtcccctcgctcgccc
cacaaccgcaacttggacagcccccccacatggagcaggatggcattaagcggaagctct
ctgagtccttacccccagcacaatgctacctcaccgggtaaagaggatggcggagggcgg
ccctgcagcgatgggggcttggccgcgggtaccctcgggaccccagagagacgcaagggc
agcctggcagacgtggtggacacactgaaacaacgcaagatggagcagctgatcaagaac
gagccagaagaggcccccagcattgagaggctgttgtcaaaggactggaaggataaactt
ttggccatgggctcagggcacatcggagaaattaaaggtaccgcagacagcctggcggag
aaagagcgccaactcatgggcatgattggacagttgagcagcctgagggagcagctcctg
gcggcccatgaggatcagaagaaactggccgcctcgcagatggagaagcagaggcagcag
atggagctggccaagcagcagcaggaccagattgcccggcaacagcagcagcttctgcag
cagcaacacaaaatcaacctcctgcagcaacaaatccagcaggtccagggccaactccct
ccgctgatgattcccgttttccctccggaccagaggactctggcggcggctgcagcccag
caaggcttcctaatgccctctggcttcagctacaagcctggctgcagtgacccctaccct
ctccagctcatccccacaactatggctgctgctgctgctgccgctgccgccacaccaggc
ctgggacccctacagctacagcagttgtacgcagctcagctggcagccatgcaggtttcc
ccaggcggcaagcagcacggaggaagcctgccaccccaaggcaacctgcgcacacactcc
ccgcccaccaacatgcactcacagagcgaaaagggccgcaactccccgctaccaaacaag
gccaaggacagtgagggtgcacagccactgaacctgtcggccaagcctaaggcatccgag
agcaagtcacccaactcccccccaacttccccacaggtcgctgctgctgctgctgccgcc
aagctgggccctgccatgaagcacagcatcgccgcctccagcatcggaggtccaccgacc
agagtcagctcgatagcagacttgttgtcgtcactgtccacgaccgcctacctgaatgac
catgaggcggtgaccaaggccttcgccgaggcccggcagatgaaggagcagctgaagaga
gagcagcaggtcctggacgccaaggtcgccgccgtcagcaacctcagcctcaacaatgga
cgctcggacaaggacaaggctgccttggagagtctgagtcaacagctgaagcagcaggcg
gaggacaagttcagccacgccatgctggacttcaccatgagcggagactctgacggctcc
cccagcgtgtcagactccagaatatttcgggaggctcggggtcgcggcaccgccgagcct
cacatcaagcggccgatgaacgccttcatggtttgggccaaggacgagaggagaaagatt
ctccaggccttccccgacatgcacaactccaacatcagcaagatcctcggctcacgctgg
aaagccatgaccaacctggagaagcagccctactacgaggagcaggctcgcctcagcaag
cagcatctggagaaatacccagactacaagtacaagccgcgacccaaacgcacctgcctg
gtggacggcaagaagctgcgcatcggcgagtacaaggccatcatgaggtcccgcagacag
gagatgagacaatacttcagtgtggggcagcagggccagatgcccttgtcctctgcaggc
gtggtttacccaggtgccctgtccatggcgggaataccctcaccacagatgccctctgag
cactctagcatgtccagcagccccgagccaaacgccaaccaccaccagaacccccacatg
gccggcctgaaggaggagccacgaatcaagcaggaggagctgcggctggacgacagcaac
ggcgacgtgtacgacgacttcgaatacgaggacgaagaggcagattacaccagcgataat
gagaaccgtatcacgcaatag
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