Cottoperca gobio: 115028290
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Entry
115028290 CDS
T07513
Symbol
tmc3
Name
(RefSeq) LOW QUALITY PROTEIN: transmembrane channel-like protein 3
KO
K21988
transmembrane channel-like protein
Organism
cgob
Cottoperca gobio
Pathway
cgob04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
115028290 (tmc3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cgob02000
]
115028290 (tmc3)
03037 Cilium and associated proteins [BR:
cgob03037
]
115028290 (tmc3)
Transporters [BR:
cgob02000
]
Other transporters
Pores ion channels [TC:
1
]
115028290 (tmc3)
Cilium and associated proteins [BR:
cgob03037
]
Other cilia and associated proteins
Stereociliary proteins
115028290 (tmc3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
115028290
NCBI-ProteinID:
XP_029317833
Ensembl:
ENSCGOG00000016203
UniProt:
A0A6J2S3K1
LinkDB
All DBs
Position
3:complement(515517..555464)
Genome browser
AA seq
1175 aa
AA seq
DB search
MSAVSDSLLGSSRSLSAAKRHKSIRKNSRRIYSSYQDHQQGSSDDEDKEDERADSNDPEE
MFQNIQYQKEIIANIRTRPWPMRRKLKVLKQAREIVLKYEGRLTRTRGYQTAGADLLKKI
SRVLYNILVLFIPWEVRIKKIESHFGSGVASYFIFLRWLFGINIVLTIMTGAFIVLPELL
AGAPFGTTRSKTIPKEHLPSAQDLDTIWSLGGYLQYSVLFYGYYGRLRKIGSAGYRLPLA
YFLVGMAVFAYSFIILLRKMAKNSRLSLASASDENFTFCWRVFCAWDYLIGNPEAAESKG
AAIINNIREAIVEEQEKKKDTSLAVLISLRILANILVLLSLAGSIYIIYFVVDRSQKLEQ
EKPELTLWEKNEVSVVVSLITMIAPSAFELVAQLEMYHPRTSLRFQLARVLVLYLGNLYS
LIIALLDKVNSMSSAVPASPGNWSDTSSFLATISQPEGNSLSTLVSEISVSEYRNSTMAT
IATMLNVRNTSTGGSRAVSNQTSLFEKNTRSQQDPCWETYVGQEMLKLSIIDMIFTVASI
LLIDFIRGLVVRYLSDCCCWDLESKFPEYGEFKIAENVLHLIYNQGMIWMGAFFSPCLPA
FNVLKLIGLMYLRSWAVLTCNVPHQQVFRASRSNNFYVAMLLFMLFLCMLPTIFAIVRYR
PSQHCGPFSGQEKIYDIISETVANDFPLWFSKVMSYVTSPVVVLPALLLLFMLIYYLQAI
ARSLKFTNNQLRMQLQTERTEDKKKVFQMAAARLQAPEADKKPDQQESDITSQEASIHTP
SPRRNGSVTNFNSPVHRGNSIRTITQSVSRTELNRGSAAGSVRSPAVTILPNHRALEHTP
NRPPHLLGGPSGTCRSKSYHHMACNPPSRYSDNIHSDPLYRKTIRSIHPVEAAGIITAQS
YGGRRGPTTRYVIVNEHDPRKKLLRSATRIPRHFLMEKPAEVLELYPRNIKRYTPRTAHH
QPHPHRSHPSQQQLSEEEEEEEEKKGRRRVTLTKAHRPRSLSDLHQPAHFYIGDRVERHV
SMAKDSHTAQGRYGVQEEDEEEDAEGEIHWGDLESHSRSQANVRGADSLLVRTKRHIHSP
GRRCQSPARTRRMESYVTPKTRPKLETPLTESDSASLASSSDQQNSSTDQYIQVIHNKEH
YLKSDARQGKQAKKKSKTSFDLNVTESNDLVCSNV
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcagtgtctgattctttgcttggcagcagcaggtctctgtctgcagccaagaga
cacaaaagtatcaggaagaactccagaaggatttattcatcctaccaggaccaccagcag
ggctcctcagatgatgaagataaagaggatgagcgggcggacagcaatgacccagaggag
atgttccagaacattcagtaccagaaggagatcatcgccaacattcggaccagaccctgg
ccaatgagacgcaagctcaaagtcctaaagcaggccagagagattgttctgaagtatgag
ggccgactgaccagaactagaggttaccaaactgccggagctgatctgctgaagaaaatt
tcacgtgtgctttacaacattttggttctgttcattccctgggaagtcaggatcaagaaa
atcgaaagtcactttgggtcgggcgtggcctcctactttatcttcctccgctggttgttc
gggatcaacatcgtcctcaccatcatgactggagccttcatcgtcctaccagagctgctg
gctggagctccgtttggaaccacaaggagtaaaactatccccaaggagcatctgccttca
gcccaagacctggacaccatttggtctcttgggggctacctgcagtactctgtgttgttc
tatggttactatggcagactgaggaaaattggtagtgcaggttaccggttgcccctcgcc
tacttcctggttgggatggccgtctttgcctacagtttcatcattctgttaagaaaaatg
gccaagaactctcgtctgagcctggccagtgcctctgatgaaaacttcacgttctgctgg
agagttttctgtgcctgggattacctgatagggaacccagaggctgcagagagcaaagga
gctgcgatcatcaataatatcagggaagccattgttgaagagcaggaaaagaagaaggat
accagtctggcagttctgatcagtctgcgtatcttagcaaacatccttgtgctgctgtct
ctggccggcagcatctacatcatctactttgtggttgaccgctcgcagaaactagagcag
gagaagccggagctgacgctgtgggagaagaatgaggtgagtgtggtggtttctctcatc
accatgatcgctccatctgcctttgaactggtggctcagctggagatgtaccaccctcga
acatcgctgcgattccagcttgccagagtgcttgttttatacctggggaatctctacagc
ctcattattgcactccttgataaggtcaacagtatgagctctgctgtcccagcgagtcca
ggtaactggtctgacaccagctccttcctggccactatctctcagcctgagggaaacagc
ctctccaccctggtttctgagatctctgtgtctgagtatcgcaacagcaccatggcaacc
attgccacgatgctgaatgttaggaacaccagcaccggcggctcgcgggccgtctccaac
cagacatctctgtttgagaagaacacccgctcccagcaggacccatgctgggagacctac
gttggacaggagatgctgaagctgtccatcattgacatgatcttcacggtggccagcatt
ctgctcattgacttcatcagaggtttggtggttcgctacctgagtgactgctgctgctgg
gatttagagagcaagtttcctgaatatggagaattcaaaatagcagagaatgttttacat
ctgatttataaccaagggatgatctggatgggagcatttttctctccctgtcttcctgcc
ttcaacgtgttgaagctgattggtctgatgtatctgaggagctgggccgtcctcacctgt
aatgttccccatcagcaggtgttccgagcctccagatcaaacaatttctatgtggctatg
ctgcttttcatgctctttctgtgtatgctgcccaccatctttgccatagtgagatacaga
ccatcccagcactgtggaccattcagtggtcaagagaagatttatgacatcatctctgag
acagtggccaatgacttccccctgtggttcagcaaagtgatgagttacgtcaccagccct
gtggtagtgctgccagcacttctgctgctgttcatgctgatatactatctccaggccatt
gccagatcactcaaatttaccaacaaccagctgaggatgcagctccagactgagcggacc
gaggacaagaaaaaagtcttccagatggctgcagcgagactgcaggctccagaggctgac
aaaaagcctgatcagcaggagagcgacatcacgagccaggaggcctccattcacactcca
tctccccgacggaacggcagcgtcacaaactttaattctcctgttcatcgtggaaacagc
atccgcaccatcacccaatcagtgtccaggacagagctgaacagaggaagtgcggctgga
tcagttagaagtccagcagttaccatactgcccaatcacagggcgctggagcacacacct
aacaggcccccacaccttcttggtggccctagtggtacctgcaggtccaagtcctaccac
cacatggcgtgcaatcccccatctcgctattctgacaacatccactctgaccccctgtac
aggaagaccatacgatccatacatccggtcgaggctgccgggatcatcactgcacagagt
tatggaggacggcgtggccccaccacccgctatgtgattgtcaatgagcatgatcccagg
aagaagctgctgcggtcagccacacggatcccgcgccatttcctcatggagaagcctgca
gaggtcctggagctgtacccacgcaacatcaaacgctacacaccccgcaccgctcaccac
caaccacaccctcaccggtcccacccatcacagcagcagctgagtgaagaggaggaagaa
gaggaggagaaaaaaggtaggagaagggtgacgttgactaaggcacatcggccccgttcc
ctttctgacctccaccaaccagcacacttctacatcggtgaccgtgtggagagacacgtg
tccatggctaaagacagccacactgctcaaggaagatatggagtgcaagaagaggatgaa
gaggaggatgctgaaggagaaatacactggggagatttagagtcacactcccggtcccag
gccaatgtgagaggagcagactctcttcttgtgcgaaccaagcgtcacatccattccccc
ggaagacgctgtcagtccccggccaggaccaggcgcatggagtcttatgtgacacccaag
accagaccaaagctggagactcctctgacagagtcagactcagcctccctggcctccagc
agtgaccagcagaacagcagcactgaccagtacattcaggtcatccacaacaaggagcac
tatctcaagtcggatgccaggcaaggaaagcaggccaaaaagaagtccaaaaccagcttt
gatctaaatgtaactgaatcaaatgacctggtctgctccaatgtatga
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integrated database retrieval system
