Cottoperca gobio: 115028332
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Entry
115028332 CDS
T07513
Name
(RefSeq) PDZ domain-containing RING finger protein 4-like
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
cgob
Cottoperca gobio
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgob04121
]
115028332
Enzymes [BR:
cgob01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115028332
Ubiquitin system [BR:
cgob04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
115028332
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
GRASP55_65
Motif
Other DBs
NCBI-GeneID:
115028332
NCBI-ProteinID:
XP_029317922
UniProt:
A0A6J2S807
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Position
23:13427255..13461927
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AA seq
816 aa
AA seq
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MGCNLCTLQKREEHYKLLYEIAQVNGRNFSKVDHDEAVVEAIRRDPIVVQVLRRTPTSAT
AAPTHNHSWTPEDVCVVDVCTQTDITFEHIMALAKLRPTTPPVPDICPFLLSDSCHSIHT
MEHEFYECPEYLSNIPAEVERTEEYEYEEVELFRQNSQEKLGLTLCYRTDDEEDTGIYVS
QVEPNSLAARDGRIKEGDRILQINGCEVQDREKAVALLSSEEARSIILLVTRPELQLEEE
VWLDDDQQELVEELKIEILEERRTQKERNFDRGDEHLAEEEMTTDTATCSSNNQDKDSGF
GRSTDSPEHQPLLAGLHRRTPAHCLRERWRAEHPHTRRGTVVPQDTQGPRTLSKGQGQEG
VASNRNGGGAILGLENRFQQLLELKCQIRNGDECGVYSIRHSIECSLTEQGVDGDGEDGI
RGGNGVEQELRMLNEELCSIELECQSIMQAHQLRQNQLNPSQPASCSPGRSPKDGHKRHG
RLADIHEYPERSDNDRIREKDSSSAYNTAESARSTPLGMERSPDHSLQRRIDFTNQKNLR
MASSCPIAIPKPQDTPSCSRPADPGSVISSSPDQSNPSRSESDPALPADDERCEKKWRSR
DSRRGLPYGAYQTTPYQGQGGSRQLQSYMQLLQQHSSLEYSQSQLSLLSVCRDPVHRSGR
PGEPRLEWKVKVRADGTRYVARRPARDRILRERALRIREERSGGMTTDDDAMSEMKMGRY
WSKEERKQHLARAREQRKRREFMQKSRLDCLKEGPASGAEGRKEINILELSQKKMMKKRN
KKILDNWMTIQELMSHGARVPEGSKVHSAFLSVTTV
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcaatttgtgcaccttgcagaaacgggaggaacactacaaactgctgtatgag
attgcacaggtgaacgggcgcaacttctccaaggtcgaccatgatgaggcagtggtggag
gccatcaggcgagaccccatcgttgtccaggttctccggcgaacacctacaagtgcaacg
gccgctcctacacataaccacagctggacgccagaggacgtgtgtgtggtggatgtttgc
acgcaaacggacatcaccttcgagcacatcatggcactggcgaagcttcggcctaccact
ccgcccgtccctgacatctgtccctttcttttgtccgacagttgtcattccatccacacc
atggagcatgagttttatgaatgtccagagtacctgtccaatatcccagcagaggtggag
aggactgaagagtatgagtatgaggaagtggagctgttcaggcagaatagccaagagaag
cttggcttgacgctgtgctacaggactgacgatgaggaggacaccggcatctatgtcagc
caggtggagccaaacagcttagcagcaagagatggacgcatcaaggaaggagatcgtatt
ctacagataaatggctgtgaagtgcaagacagagagaaagctgttgccttgttatcaagt
gaagaagcaaggagcatcatactactggtgacaagaccagaactccagttggaggaagag
gtatggctggatgacgatcaacaggagctcgtggaggaactgaagatagagatcctggag
gagaggaggacgcagaaggaacgtaactttgacaggggagatgagcatctagctgaagaa
gagatgacaacagacacagctacctgttcctccaacaatcaagacaaagacagtgggttt
ggacgcagtacagacagtccagagcatcaaccacttctggctggactccacaggcgaacc
ccagcccattgtctgagggagcgatggcgggccgagcatccacacacaagacgagggact
gtagtgccacaggacacccagggtccgaggacattgtccaaaggccaaggccaggaaggg
gtagccagtaatcgcaatggtggaggcgcgatcctaggtttagagaatcgctttcagcaa
ctcctggaacttaagtgtcaaattcggaatggagacgagtgtggggtgtactccattcga
cacagtatagagtgtagtctcacagagcaaggagtggacggagatggcgaagatggcatt
agaggagggaatggagtggagcaggagttgaggatgctaaatgaggaactgtgcagcata
gagctcgagtgccagagtatcatgcaagcgcatcagctccgccagaatcagctaaacccc
tcccaaccggcatcgtgctcaccaggacggagccctaaagacggacacaagaggcacggc
aggttggccgacatccatgaatacccagagcggtcggacaacgacaggatccgagagaag
gacagctccagtgcctacaacacggcagagagtgcaaggtcgacaccgctaggtatggag
agatcgcctgatcattctctgcagaggcgcatcgacttcaccaaccagaaaaacctcaga
atggcttcctcctgtcccattgctattccaaagccgcaggatacacccagttgtagcaga
ccagcagacccaggctctgttatctccagcagcccagaccagagcaacccttcccggtcc
gagtcggaccctgccctgcctgcagacgatgagaggtgtgaaaagaaatggaggagcaga
gattccaggagggggcttccctatggtgcctatcagacaaccccttatcaaggccaggga
ggatccaggcaactgcagagctacatgcagctgctacaacagcactcatccctggagtat
tcccagagccagctgagtctgctcagtgtctgtcgagatcccgtgcaccgtagcggacgc
cctggggaaccccgtctagagtggaaggtcaaagttcgggctgatggcacgcgctatgtg
gcccggaggcctgctcgtgaccgcatcctgagggagcgggcactaaggataagagaggag
aggagcggaggtatgactacagatgacgatgctatgagcgagatgaagatgggccgctac
tggagcaaagaggagaggaagcaacacttggcgcgggccagggagcaaagaaagaggagg
gagttcatgcaaaagagtcgcctcgattgtctaaaggagggcccagccagtggagctgag
ggcaggaaggagatcaatattttggagctcagtcaaaaaaagatgatgaagaaacgaaac
aaaaagatcctagataactggatgaccatccaagagctgatgagccatggggccagagtc
ccagagggttcaaaagtacatagcgccttcctatctgtcacaactgtctag
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