Cottoperca gobio: 115028461
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Entry
115028461 CDS
T07513
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit beta-1-like
KO
K05636
laminin, beta 1
Organism
cgob
Cottoperca gobio
Pathway
cgob04510
Focal adhesion
cgob04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115028461
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115028461
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
F5_F8_type_C
LAMB1
EGF_Teneurin
DUF4443
Motif
Other DBs
NCBI-GeneID:
115028461
NCBI-ProteinID:
XP_029318108
Ensembl:
ENSCGOG00000022966
UniProt:
A0A6J2S4C6
LinkDB
All DBs
Position
23:complement(1715058..1731950)
Genome browser
AA seq
1791 aa
AA seq
DB search
MRRAVNVPHLEMSLIILFITTLALWSPVRAQQFPDHADVCTEGSCYPATGDLLIGRAHKL
SVTSTCGLKQPERFCIVGHLEEEKKCFVCDSRKPFDENNNQVSHTIDNLVTTFAHNRLKT
WWQSENGVENVTIQLDLEAEFHFTHLIMTFKTFRPSAMVIERSMDFGKTWQVYRYFAYDC
EATFPGVSAGPMVKVDEILCDSHYSDIEPSTEGEVIFRVLDPVFKIDDPYSLRIQNMLKI
TNLRVNFMKLHTLGDNLLDSRDEVTEKYYYSLYDMVVRGNCFCYGHASECAPIDGATGDE
GMVHGRCSCNHNTEGLNCEHCQDFYHDLPWKPAEGRNTHACKRCECNHHSTSCHFDMAVY
MTTGNMSGGVCEDCQHNTGGRQCEQCAPFYYQHPNRDLRDPNVCEPCNCDPAGSLQGGLC
DSHTDVAARLISGQCRCKANVEGERCDHCRQGHHGLGQGPQGCLPCTCSPLGTLLGGNSC
DSDTGACFCKRLVDGHNCDQCLPQHWGLSNDMDGCRSCDCDQGGAVNNNCDPHSGQCVCR
EHMFGRRCDQVESGFYFIALDHYTYEAEDGKHGPGVTVVQRPYPLDRSPTWTGMGFVNVP
EGAYLEFLINNIPESMEYDILIRYEPQLPEQWEQVKIRVQRPVFNPPNVSAHCSNSIQIA
DEQAISLPPGSRHVLLVRPVCFEKGLNYTIRLTLPLYSSATDVQSPYTLIDSLVLIPRVR
EMDMFVGIDGDGAWDTFQRYRCLESSQSVVKSPLTDICNDYIFSVSALLHKGAIACQCDP
QGALSAVCEPSGGQCRCRHNVVGRNCDHCAPATFLFSPAGCRPCDCDPRGSIGAFCHEAT
GQCECVPGATGRQCSHCLPGFWGFPQCRPCQCNGHSEYCHPQTGECQGCRDFTSGHHCER
CLEGYHGDPELGSGGHCRACMCPDGPRSGRQFSDSCYLLAITNQLVCVCSPGYKGARCDE
CAPGYFGNPLVPGGRCMPCQCNSNIDMHDPRSCDTRTGACQKCLHHTEGYGCQHCKLGYY
GNAATQSCRKCMCYSVGTSPRACSSSDECQCDQHSGQCSCQPNVVGQNCDRCAVDTWNIR
SGTGCQRCGCDPDHSFGSSCNEVTGQCLCKPGFGGETCQECRELFWGDPEVKCHACDCDS
RGISSEQCHRATGQCTCVEGVSGPRCDKCGRGYQGEFPTCERCHQCFAVWDTVVGELTNQ
TRRLEARVTELQTSGVTAPYKDLVSSLNRNVLAVREIVESNPAAVKLEQIQDLMHHIIGV
MSYLNGKLNTTEETLNLLSSDANATDANLDSLTEEANRLEQSVQELRQRVYNAKNANIQG
AMDTIVSAHMKSTMAELQVNASTSDPGNTVEESATVRKATDEKLNGTQKEFDRKHKRNSQ
KLDKLSTELGEFDLTPLSEATCGGAAEGDGCSGSPCGGLGCVGEDGAPQCGGELCVGLVT
TSRTALKSAEDLDDKILEAMQEVDKLSRMVWEANNRAKEAKVSALEVLVKSNRSKERVVQ
SNEQLRNLIKEIRDLLTNEKADVSVIEAVSNEVLALEMPTSTEKLQELTEEIREKVGALT
SVETILIQSAEDIQTAETLLQQAKAASEEASNMKETTDVVKTALDETERAQSIAMDAIQL
AQNNTKGTLDLLISVESETALSELKLGNTTGRLIQLEREVGLLRQNNLEVDHLAKTSDWI
TDQARENAEEAQQEFDVEVKDKFVEVEDLVEDKGESVLQARRRADKLQKEAKELLAQSSS
KLQRLGELESSYAANQLILEAKAAELAELEQTVRKVLDEISYKVTLYSTCL
NT seq
5376 nt
NT seq
+upstream
nt +downstream
nt
atgagacgtgctgtcaatgttccgcacttggaaatgtcgctcataatcctctttataaca
actttggccctctggagccctgtcagggcacagcagttcccagatcatgcggatgtttgc
accgagggcagctgctaccctgccacaggtgacctgctgatcggccgcgcgcacaagctc
agcgtcacctccacctgcggcctgaagcagccggagcgcttctgcattgtcggacatctg
gaggaggagaagaaatgttttgtgtgcgactccaggaagcctttcgacgagaacaacaac
caagtcagccacaccatcgacaacctggtcaccaccttcgcccacaaccgcctcaagacc
tggtggcagtcggagaacggtgtggagaatgtgaccatccagctggacctggaggccgag
tttcacttcacacatcttatcatgaccttcaagacgtttcggccgtctgccatggtgatc
gagcggtccatggactttgggaagacgtggcaggtttatcgttactttgcctacgactgc
gaggcgaccttccccggcgtgtccgcggggccgatggtcaaagtggacgaaatcctctgc
gactcccattactcagacatcgagccatccaccgagggagaggtgatatttcgggtgctg
gatcccgtcttcaagatagacgacccctacagcctgaggattcagaacatgctgaagatc
actaacctccgggtgaatttcatgaagctccacacgctgggcgacaacctgctcgactcc
cgcgacgaggtgacggagaagtactactactccctctacgacatggtcgtccgtggcaac
tgcttctgctacggtcacgcctccgagtgcgccccgatcgatggagcgaccggagatgag
ggcatggtccatggccgctgttcgtgtaatcacaacacggagggactaaactgtgagcac
tgccaagacttttaccatgatttgccttggaaacctgcagagggacgaaacacccacgcc
tgcaagaggtgtgagtgtaaccatcactccacgtcgtgtcacttcgacatggccgtgtac
atgacgaccggcaacatgagcggaggcgtgtgcgaagactgtcaacacaacacggggggc
cgacagtgcgagcagtgtgcacctttctactaccagcaccccaaccgggacctgagggac
cccaacgtctgcgagccgtgtaactgtgacccggccggctctctgcagggcggactgtgt
gactcgcacactgatgtggcagccaggctgatctcaggccagtgtcggtgcaaagccaat
gtggagggcgagcgctgcgatcactgcagacagggacaccacggactgggacaggggcct
caaggctgcctgccttgcacctgtagcccgctgggcactctgctgggaggaaactcctgt
gattcggacacaggagcgtgtttctgcaaacgcctggtcgacggacataactgtgatcag
tgtctgccgcagcactggggcctgtccaatgacatggacggctgcagatcatgtgactgc
gaccagggcggggccgtcaacaacaactgcgaccctcactcaggacagtgtgtgtgcagg
gagcacatgtttggacgccgctgcgatcaggtcgagtccggcttctacttcatcgctctg
gatcactacacctacgaggccgaggacggcaagcatggacccggtgtgacggtggtccag
aggccttaccctctggaccgcagtcctacgtggaccgggatgggctttgttaatgtgcca
gaaggagcctacttagagttcctcataaacaacatcccagagtccatggaatacgacatc
cttattcgctatgagccacagctgccagagcagtgggagcaggtgaagatccgagtacag
cgtcccgtcttcaaccctccaaacgtctccgctcactgcagcaactccatccagattgca
gacgagcaggccatctctcttccacccggatccagacacgtgttgctggtgaggccggtg
tgtttcgagaaaggactgaactacacgatccgtctcactctgcctctctactcctcagcc
actgacgtccagagcccgtacacactcattgactccttggtgctgataccacgggtcagg
gagatggacatgttcgttgggatcgacggtgacggagcgtgggatacattccagcgctac
cggtgtctggagagcagccagagcgttgtgaaaagccccctgaccgacatctgcaacgac
tacatcttcagcgtctctgctctgctgcacaaaggagccatcgcatgccagtgtgaccct
cagggcgccctcagcgctgtgtgtgagcccagtggaggtcagtgccgatgtcgacacaac
gttgtcggcaggaactgtgaccactgtgccccggcgacgtttctgttcagccccgccggc
tgcagaccttgcgactgtgaccctcggggctcgatcggcgccttctgccacgaggcgaca
ggccagtgcgagtgtgtccccggggccacggggcgccagtgttcccactgcctgccgggc
ttctggggcttccctcagtgcagaccgtgccagtgtaacggccacagcgagtactgccac
cctcagaccggagagtgtcagggctgcagagacttcaccagcggacaccactgtgagagg
tgtctggagggttaccatggagacccagagctgggttcaggtggccactgtcgcgcctgt
atgtgccctgatggaccgcgcagtgggcgccagttttctgacagctgttaccttctggcc
attactaaccagctggtgtgtgtgtgcagccctggctacaaaggtgccaggtgtgatgag
tgtgctccgggttatttcgggaaccctctggtgcccggtgggcgctgcatgccctgccag
tgcaacagtaacatcgacatgcacgacccgcgctcctgtgacactcggaccggcgcctgt
cagaagtgccttcaccacaccgagggctacggctgtcagcactgcaaactgggttactac
ggcaacgctgccactcagagctgcaggaagtgtatgtgttactctgtgggcacgtcgcct
cgggcctgctcctcctctgacgagtgtcagtgtgatcagcacagcggtcagtgttcctgc
cagcccaacgtggtcggtcagaactgcgaccgctgtgccgttgatacctggaacatccgc
agcgggacgggctgccagcgctgcggctgcgaccccgaccactccttcggatcctcctgt
aatgaggtcacaggacagtgtttgtgcaaacccggttttggtggcgagacgtgtcaggag
tgcagagagctcttctggggggacccagaggtcaagtgtcacgcctgtgactgcgactct
cggggaatctccagcgagcagtgccaccgtgcgacaggtcagtgcacctgtgtggagggc
gtgtccggcccccggtgcgacaagtgcggcaggggctaccagggtgagttccccacctgt
gaacgctgccaccagtgctttgctgtctgggacaccgtggtcggcgagctgaccaatcaa
actcggcgtctggaggcccgggtaaccgagctccagaccagcggggtgacggcgccgtac
aaagacttggtcagcagcctgaatagaaacgttctagctgtcagagaaatagtggagagc
aaccctgcagccgtgaagctggagcagatacaagacctgatgcatcacatcatcggtgtg
atgtcctatttgaacggaaagctgaacacgacggaagagaccttgaacctcctcagcagt
gacgccaacgccaccgatgcaaacttggactcgttgactgaagaggccaaccggctggag
cagagcgtccaggagctgaggcagcgggtgtacaacgccaagaacgccaacatccagggt
gccatggacaccattgtatctgcacacatgaagtctacgatggcagagctccaggtcaac
gcctccaccagtgatcctggaaacacggtggaggagtccgccacagtacggaaagccacg
gatgaaaaactaaacggtactcagaaggagtttgaccgcaagcacaaaagaaactcgcag
aagctggacaaactgtccactgagctgggtgaatttgacctgacgccactcagcgaagcg
acatgtggaggcgcggctgaaggtgacggctgctctggctccccgtgcggtggtttgggt
tgtgtcggcgaggacggggcgcctcagtgcggcggagagttatgcgtaggcctcgtcacg
acctcccgcactgctctcaaatcagccgaagacctggacgacaagatcctcgaagcgatg
caggaggtggacaagctctccaggatggtatgggaagccaacaaccgcgcaaaagaagcc
aaggtgagcgctctggaagtgctggttaaatccaaccggagcaaagagagagtggtgcag
agcaacgagcagctgcgcaacctcatcaaagagatacgagacctgctcaccaatgagaag
gcagatgtttcggtgattgaggcggtgtccaacgaggtgttggctctggagatgccgacg
tcgacagaaaagctgcaggagctgacggaggagatcagggagaaggtcggcgcgctgacc
agcgtggagacgatcctcattcagagcgctgaggacatccagactgcagagacgctgctg
caacaagccaaggctgccagtgaggaggcgtctaacatgaaggagacaacagatgtagtg
aagacggccctggatgagactgagcgcgctcagagtatcgccatggacgccatccagctg
gcccagaacaacacgaagggcaccttggacctgctgatctctgtggagtcggagacggcg
ctgtcggagctgaagctcggcaacaccacgggtcgtctgattcagctggagcgggaggtc
ggcctgctgagacagaacaacctagaggtggaccacctggcgaagacgtccgactggatc
accgaccaggccagagagaacgccgaggaggcccagcaggagtttgacgtggaggtgaaa
gataaatttgtggaggtggaggacctggtggaggataaaggggagtcagtgctgcaggcg
aggaggagagcagacaaactgcagaaggaggccaaagaactgctcgcccagagcagcagc
aagctgcagagactcggagagttggagagttcttacgcggccaaccagctcatcctggag
gctaaagctgcagagctggccgagttggagcaaacggtccgcaaggtcctggacgagatc
agctacaaagtgacgctgtacagcacctgtctgtga
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integrated database retrieval system
