Cottoperca gobio: 115028533
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Entry
115028533 CDS
T07513
Symbol
casc1
Name
(RefSeq) LOW QUALITY PROTEIN: protein CASC1
KO
K17580
cancer susceptibility candidate protein 1
Organism
cgob
Cottoperca gobio
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cgob01009
]
115028533 (casc1)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cgob03037
]
115028533 (casc1)
Protein phosphatases and associated proteins [BR:
cgob01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
115028533 (casc1)
Cilium and associated proteins [BR:
cgob03037
]
Motile cilia and associated proteins
Dynein arm
115028533 (casc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Casc1_N
Casc1_C
DUF7348
GEMI5_RBS
Motif
Other DBs
NCBI-GeneID:
115028533
NCBI-ProteinID:
XP_029318234
UniProt:
A0A6J2S8F1
LinkDB
All DBs
Position
23:10418369..10426023
Genome browser
AA seq
732 aa
AA seq
DB search
MRKRFYGYLDAVELFNFSMSKGKLTKAQKAKQQQEEEERRLREEEEAQLQAEKEEQERLE
RERKDKELERLELKDLERREVELNELRHLLEENHTAVTKWKTDAVEKAKWERYLHCDGTP
DPAVQQEVNTYISLWRDDPEVNVTLVLKQCNIALQLVEELEGLLRDVTDPQEGHKYQEGL
IHLQELIHSKHHLTTEEILKRASVNSNTETGNMQTVVQDDNITLCLWCNLNTKSRFEGLI
FEETGLGFELPKQLAVSNIAVRILHTRYDHLSLLARMAHLRINTPSYRSLAGGEEVPADI
DVPEQGETKREGEVMEENEVQQRVDGEVQSIQGFEGRKSVASLQSGRDSVQPAEGRGSQI
QTQMEALGAEGELTSSLVQLTVMDPGESVQVVDLKQYTPLGGVFYYDVFHLPPQAHQVNG
WEIRQLLDKGLQVFPYPMEKSNFDDNEVLTCSLVGVSVTLPESVVFLETPQVARWDTAVK
QWRMDGIIDMSYDEAESKISFKMDSFQAFVLMQDTYANLPFLSWELRPLGQDSALFTVNG
ALSELSVRIQGNQCMLQSEQERGLSHLTGKWMSGPALQRAMLNAGVNIFVNEYTDKYVSS
CGKDPLTEHAAYEQMALFASACAFSWSKWNAKCGAEHLIMQVCEHLGSDPVPKSSWSLYL
LGAQRSQKLEITEKSEAFSPDLYPGSEFHSTFIHMLQDNMSTDGRARARESNYLFIDTVQ
SLLCATRPLMYS
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaaacgtttctatggttacctggacgctgtagagctttttaatttcagtatgtca
aaaggtaagttgaccaaggcccagaaggcgaagcagcagcaagaggaggaggagaggagg
ctgcgtgaggaagaggaagcacagctgcaagcagagaaagaggagcaggagaggttggaa
agagagaggaaggacaaagagctagaaaggcttgagttaaaggacctcgagcgcagagaa
gttgagctgaacgaactccgccatctgctggaggagaatcatactgcagtaaccaaatgg
aaaacagatgctgtggagaaagccaagtgggagagatacctgcattgtgacggcacccca
gaccctgcggtgcagcaggaggtcaacacatatatcagcttatggagagatgacccagag
gtcaacgtcacactcgttctcaaacaatgcaacatcgctctacagctggtggaggagctg
gagggtctgctcagagatgttacagatccacaagagggccacaagtaccaggaggggctc
atacatttgcaggagctaattcacagtaaacatcacctcaccactgaggagatcctcaag
agggccagtgtgaacagcaacactgagacaggcaacatgcagactgtggtccaggatgac
aacattacactgtgtctctggtgtaacctcaatacgaaatcaaggtttgaaggtttgatc
tttgaagagacaggccttggctttgagcttcccaaacagctggctgtgagcaatattgct
gtccggatcctccacacacgttatgaccatctgtccttgctggccagaatggctcacctg
agaataaacacacccagctacaggtctcttgcaggcggtgaggaggttccagcagacata
gatgtaccggagcagggggagacaaaacgagagggcgaggtgatggaagagaacgaggtg
cagcagagagtggacggggaggtgcagtccatccaaggctttgaagggaggaaaagtgta
gccagcctacagtcggggagagacagtgtccagcctgcagaaggcagagggagccagata
cagacacagatggaggcactcggtgctgagggggaattgacttcttccctcgtgcagctg
acagtgatggaccccggtgagagtgtccaggtggtggacttaaagcagtacactcctctg
ggcggggtcttctactatgacgtgtttcacctcccgccacaagcccaccaggtcaatggc
tgggaaattagacagctgttggacaaagggctgcaggtgttcccctaccccatggagaag
tctaactttgatgacaacgaagttcttacctgctctcttgttggtgtgtctgtgacactg
cccgaatctgtcgtcttcttggaaactccccaagtggctcgctgggatactgcagtgaag
caatggaggatggacggcatcattgacatgtcttatgatgaggcagagtccaaaatctca
ttcaagatggactccttccaggcctttgtgctgatgcaggacacatatgccaaccttccc
ttcctgagctgggagctcaggccgttgggccaagactcggctctcttcaccgtcaacggg
gcactcagcgagctcagtgtcaggattcagggtaatcagtgtatgctgcagtcagaacaa
gagagaggtctctctcacctcacagggaagtggatgagtggccccgccctgcagagagcc
atgctcaacgcaggcgtcaacatctttgtgaacgagtacacggacaaatacgtcagcagc
tgcggcaaggatccacttacagaacatgctgcctacgaacagatggccctcttcgcctct
gcctgcgctttctcgtggagcaagtggaatgctaaatgtggagcagagcatctaatcatg
caggtgtgtgagcacctcggctctgacccggtgcctaagagctcgtggagtctctacctg
ctgggcgctcagaggagtcagaagctggaaataacagagaagagtgaggctttctctccg
gacctatatcccggcagtgagtttcactcgacctttatccacatgctccaggacaacatg
agcactgatggcagagccagggccagagaatccaactatctgttcatcgacacagtacag
agcctgctctgtgccaccagaccgctgatgtattcgtaa
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