Cottoperca gobio: 115028954
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Entry
115028954 CDS
T07513
Symbol
hbs1l
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
cgob
Cottoperca gobio
Pathway
cgob03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115028954 (hbs1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgob03019
]
115028954 (hbs1l)
Messenger RNA biogenesis [BR:
cgob03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
115028954 (hbs1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
GTP_EFTU_D4
GUCT
Motif
Other DBs
NCBI-GeneID:
115028954
NCBI-ProteinID:
XP_029318767
Ensembl:
ENSCGOG00000022448
UniProt:
A0A6J2SAF4
LinkDB
All DBs
Position
24:complement(10687934..10710460)
Genome browser
AA seq
690 aa
AA seq
DB search
MSRHRNVRGYNYDEDLDDDDVYGQSVDDDYCISPATANQFIYSRQERQAPKEQPLEEEEY
EDDVPMSPTISHDLDPLDQAKLYSCLDHMRTVLGDAVHDSVLSQAAIKCGFDPQKALDAV
LSEDAKTAPVIKSANEETASVPRVSQEKAPLPQRTKKEAAAEKAKSRDVTHSKLDSEVVP
KVARMTVSGKKQTMGFDVPSSGVNGVFGSAENSASEAMSKRPVTPSKGSNGDEPSTVPTP
GRSSGKARQSINIKAELEKRQGGKPLLNLVVIGHVDAGKSTLMGHLLYLLGNVNKRTMHK
YEQESKKAGKASFAYAWVLDETGEERDRGVTMDVGMTKFETNSKVVTLMDAPGHKDFIPN
MITGAAQADVAVLVVDASRGEFEAGFEAGGQTREHALLVRSLGVTQLAVAVNKMDQVNWQ
QERFQDIISKLGHFLKQAGFKESDVFYIPSSGLSGENLTTRSSVSQLTSWYSGPSLLEQI
DAFKAPQRSVDKPFRLCVSDVFKDQGSGFCVTGKIEAGYIQTGERILAMPPNETCTVKGI
TLHDEALDWAAAGDHVSLTVTGMDIIKINVGCVFCDPKEPVRVCTRFRARILLFNIELPI
TQGFPVLLHYQTVSEPATIRKLISVLHKSSGEVLKKKPKCLSKGMNAIVEIQTQRPVSLE
LYKDYKELGRFMLRYVGSTIAAGVVTEIKE
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggcacagaaatgtccgaggttataactacgatgaagacctcgatgatgatgac
gtgtatggacagtctgtggatgatgactactgtatatcaccagcaacagcgaatcagttc
atctactcgcgtcaagagaggcaagcaccaaaggagcagcctttagaagaggaagaatat
gaagatgatgtacccatgtcccctaccatcagccacgacctagaccctctcgaccaagcg
aagctgtattcctgccttgaccatatgcggactgtgttgggagatgcagtgcacgactca
gttctgtcccaggcagccattaaatgtggattcgacccccagaaggcactggatgcagtc
ctttctgaagacgctaaaacagccccagttatcaaaagtgccaatgaagagactgcttcg
gtaccaagagtaagccaagagaaagctccgcttccacaaagaaccaagaaagaggctgcg
gctgagaaagctaaaagcagagatgttactcacagtaaactggactctgaagtggtaccc
aaagtggcccgcatgaccgtctctggcaagaagcagaccatgggctttgatgttcccagc
tcaggggtgaacggcgttttcggcagcgctgaaaactctgcctcagaagcaatgtccaag
cgtcccgtgactccatctaaagggtcaaatggagacgagccctccacagttcccacccca
ggccgctcctctgggaaggcccggcagtcgatcaacatcaaggcagaactggagaagagg
caggggggcaaacctctcttaaatttggtggttataggtcatgtggatgcgggtaaaagc
acactgatgggtcatctgctttatctgctgggcaacgtcaacaagcgcaccatgcacaag
tacgagcaggagtcaaagaaggcgggaaaggcctccttcgcctatgcttgggtcctggac
gaaactggcgaggagagggacagaggtgtgacaatggatgtgggcatgaccaagtttgag
actaactctaaggtggtgaccttaatggacgcgccaggacacaaagacttcatccccaac
atgatcacaggagctgcgcaggccgacgtggcggtgctcgtggtggatgccagccgagga
gagttcgaggcgggcttcgaggcgggcggtcagaccagagagcatgccctgttggtgcgt
tcgcttggcgtcactcagctggctgtagctgtcaacaagatggaccaggtaaactggcaa
caagagcgtttccaagacatcatttccaaactcggccattttctcaagcaggcaggattc
aaggagtctgatgttttctacatccccagcagcggcctgtcaggagaaaacctcaccacc
aggagttcagtgtcacaacttacctcctggtactccggtcccagcctgctggagcagatt
gacgccttcaaagcccctcagagatctgtagacaaaccgttcagactgtgcgtttctgat
gtgttcaaagaccagggttcaggcttctgtgttactgggaagatcgaggctggttacatt
cagaccggagagagaatacttgctatgcctcccaatgaaacctgcactgtcaaaggtatt
actcttcacgatgaggctctggactgggctgcagcaggagaccatgtcagcctgacggtc
actggcatggacatcatcaagattaacgtgggctgtgtgttctgtgatcccaaggagcct
gttagagtctgtactcgattcagagcccgaatccttctcttcaatatcgagctccccatc
acacaaggcttcccagtactgctgcattaccaaacagtcagtgagccggccaccattagg
aaactgatcagtgttctacacaagagcagcggcgaggtcctcaagaagaaaccaaagtgt
ttgagtaaaggtatgaatgccatcgtggagatccagacgcagaggccggtgtcattagag
ctgtacaaggactataaggagctgggccgcttcatgctccgatatgtgggctccactatt
gctgcaggggttgtcactgagatcaaagaatga
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