KEGG   Cottoperca gobio: 115028954
Entry
115028954         CDS       T07513                                 
Symbol
hbs1l
Name
(RefSeq) HBS1-like protein isoform X1
  KO
K14416  elongation factor 1 alpha-like protein
Organism
cgob  Cottoperca gobio
Pathway
cgob03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:cgob00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    115028954 (hbs1l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cgob03019]
    115028954 (hbs1l)
Messenger RNA biogenesis [BR:cgob03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     115028954 (hbs1l)
SSDB
Motif
Pfam: GTP_EFTU GTP-eEF1A_C GTP_EFTU_D3 HBS1_N GTP_EFTU_D2 MMR_HSR1 AAA_22 DO-GTPase2 GTP_EFTU_D4 GUCT
Other DBs
NCBI-GeneID: 115028954
NCBI-ProteinID: XP_029318767
Ensembl: ENSCGOG00000022448
UniProt: A0A6J2SAF4
LinkDB
Position
24:complement(10687934..10710460)
AA seq 690 aa
MSRHRNVRGYNYDEDLDDDDVYGQSVDDDYCISPATANQFIYSRQERQAPKEQPLEEEEY
EDDVPMSPTISHDLDPLDQAKLYSCLDHMRTVLGDAVHDSVLSQAAIKCGFDPQKALDAV
LSEDAKTAPVIKSANEETASVPRVSQEKAPLPQRTKKEAAAEKAKSRDVTHSKLDSEVVP
KVARMTVSGKKQTMGFDVPSSGVNGVFGSAENSASEAMSKRPVTPSKGSNGDEPSTVPTP
GRSSGKARQSINIKAELEKRQGGKPLLNLVVIGHVDAGKSTLMGHLLYLLGNVNKRTMHK
YEQESKKAGKASFAYAWVLDETGEERDRGVTMDVGMTKFETNSKVVTLMDAPGHKDFIPN
MITGAAQADVAVLVVDASRGEFEAGFEAGGQTREHALLVRSLGVTQLAVAVNKMDQVNWQ
QERFQDIISKLGHFLKQAGFKESDVFYIPSSGLSGENLTTRSSVSQLTSWYSGPSLLEQI
DAFKAPQRSVDKPFRLCVSDVFKDQGSGFCVTGKIEAGYIQTGERILAMPPNETCTVKGI
TLHDEALDWAAAGDHVSLTVTGMDIIKINVGCVFCDPKEPVRVCTRFRARILLFNIELPI
TQGFPVLLHYQTVSEPATIRKLISVLHKSSGEVLKKKPKCLSKGMNAIVEIQTQRPVSLE
LYKDYKELGRFMLRYVGSTIAAGVVTEIKE
NT seq 2073 nt   +upstreamnt  +downstreamnt
atgtctcggcacagaaatgtccgaggttataactacgatgaagacctcgatgatgatgac
gtgtatggacagtctgtggatgatgactactgtatatcaccagcaacagcgaatcagttc
atctactcgcgtcaagagaggcaagcaccaaaggagcagcctttagaagaggaagaatat
gaagatgatgtacccatgtcccctaccatcagccacgacctagaccctctcgaccaagcg
aagctgtattcctgccttgaccatatgcggactgtgttgggagatgcagtgcacgactca
gttctgtcccaggcagccattaaatgtggattcgacccccagaaggcactggatgcagtc
ctttctgaagacgctaaaacagccccagttatcaaaagtgccaatgaagagactgcttcg
gtaccaagagtaagccaagagaaagctccgcttccacaaagaaccaagaaagaggctgcg
gctgagaaagctaaaagcagagatgttactcacagtaaactggactctgaagtggtaccc
aaagtggcccgcatgaccgtctctggcaagaagcagaccatgggctttgatgttcccagc
tcaggggtgaacggcgttttcggcagcgctgaaaactctgcctcagaagcaatgtccaag
cgtcccgtgactccatctaaagggtcaaatggagacgagccctccacagttcccacccca
ggccgctcctctgggaaggcccggcagtcgatcaacatcaaggcagaactggagaagagg
caggggggcaaacctctcttaaatttggtggttataggtcatgtggatgcgggtaaaagc
acactgatgggtcatctgctttatctgctgggcaacgtcaacaagcgcaccatgcacaag
tacgagcaggagtcaaagaaggcgggaaaggcctccttcgcctatgcttgggtcctggac
gaaactggcgaggagagggacagaggtgtgacaatggatgtgggcatgaccaagtttgag
actaactctaaggtggtgaccttaatggacgcgccaggacacaaagacttcatccccaac
atgatcacaggagctgcgcaggccgacgtggcggtgctcgtggtggatgccagccgagga
gagttcgaggcgggcttcgaggcgggcggtcagaccagagagcatgccctgttggtgcgt
tcgcttggcgtcactcagctggctgtagctgtcaacaagatggaccaggtaaactggcaa
caagagcgtttccaagacatcatttccaaactcggccattttctcaagcaggcaggattc
aaggagtctgatgttttctacatccccagcagcggcctgtcaggagaaaacctcaccacc
aggagttcagtgtcacaacttacctcctggtactccggtcccagcctgctggagcagatt
gacgccttcaaagcccctcagagatctgtagacaaaccgttcagactgtgcgtttctgat
gtgttcaaagaccagggttcaggcttctgtgttactgggaagatcgaggctggttacatt
cagaccggagagagaatacttgctatgcctcccaatgaaacctgcactgtcaaaggtatt
actcttcacgatgaggctctggactgggctgcagcaggagaccatgtcagcctgacggtc
actggcatggacatcatcaagattaacgtgggctgtgtgttctgtgatcccaaggagcct
gttagagtctgtactcgattcagagcccgaatccttctcttcaatatcgagctccccatc
acacaaggcttcccagtactgctgcattaccaaacagtcagtgagccggccaccattagg
aaactgatcagtgttctacacaagagcagcggcgaggtcctcaagaagaaaccaaagtgt
ttgagtaaaggtatgaatgccatcgtggagatccagacgcagaggccggtgtcattagag
ctgtacaaggactataaggagctgggccgcttcatgctccgatatgtgggctccactatt
gctgcaggggttgtcactgagatcaaagaatga

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