Corynebacterium gottingense: CGOTT_01950
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Entry
CGOTT_01950 CDS
T09376
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cgoi
Corynebacterium gottingense
Pathway
cgoi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cgoi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CGOTT_01950 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgoi03021
]
CGOTT_01950 (rpoA)
03400 DNA repair and recombination proteins [BR:
cgoi03400
]
CGOTT_01950 (rpoA)
Enzymes [BR:
cgoi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CGOTT_01950 (rpoA)
Transcription machinery [BR:
cgoi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CGOTT_01950 (rpoA)
DNA repair and recombination proteins [BR:
cgoi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CGOTT_01950 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
WJZ12352
LinkDB
All DBs
Position
415200..416213
Genome browser
AA seq
337 aa
AA seq
DB search
MLISHRPQLTEEYIDTNRSKFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIKIDGVL
HEFTTIAGVKENVSEIILNIKDLVLSSDSDEPVVMYLSVEGPGNVTAGDIEPPAGVEIHN
PDLHIASLSEQARLEMELVVERGRGYVPAMPNAGGEPGRIPVDQIYSPVTRVAYKVEATR
VEQRTDFDKLIIDVETKNSMAARDALASAGSTLVELFGLARELNTASEGIEIGPSPQETE
FIAAYNTPIEDLNFTVRSYNCLKRQEIHTVGQLAECTESELLDIRNFGQKSINEVKIKLA
SQGLTLKDAPEDFDPTQIEGYDAETGDFVDPSGDETE
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgctcatctctcaccgtccgcagttgaccgaggagtacatcgacaccaaccgctcgaag
ttcgtcatcgagccgctcgagcctggtttcggctacaccctcggtaactccctgcgccgc
acgctgctgtcgtccattccgggcgcggccgtgacctccatcaagatcgatggtgtgctc
cacgagttcaccaccatcgctggtgtgaaggagaacgtttccgagatcatcctcaacatc
aaggacctggtgctgtcctccgactccgacgagccggttgttatgtacctgtccgtcgag
ggcccgggcaacgtcaccgcgggcgacatcgagccgccggctggcgtggagatccacaac
ccggatctgcacatcgcatcgctgagcgagcaggctcgtctggagatggagcttgttgtc
gagcgcggccgcggctacgtcccggccatgcccaacgcgggcggggagcccggccgtatc
ccggtcgaccagatctactccccggtcacccgcgtcgcctacaaggttgaggcgacccgt
gttgagcagcgcaccgactttgacaagctgatcatcgacgtggagaccaagaactccatg
gcagcgcgcgacgccctggcttccgcaggctccaccctggtggaactgttcggcctggcc
cgcgagctgaacacggcgtccgagggcattgagatcggcccctccccgcaggagaccgag
ttcattgccgcgtacaacacgccgatcgaggacctgaacttcaccgtgcgttcctacaac
tgcctgaagcgccaggagatccacaccgtcggtcagctcgcagagtgcaccgagtccgag
ctgctggacatccggaacttcggccagaagtccatcaacgaggtcaagatcaagctcgct
tcgcagggcctgaccttgaaggatgctccggaagatttcgacccgacgcagatcgagggc
tacgatgccgagaccggcgacttcgtcgatcccagcggggatgagaccgagtaa
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