Corynebacterium gottingense: CGOTT_05955
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Entry
CGOTT_05955 CDS
T09376
Symbol
gabR
Name
(GenBank) HTH-type transcriptional regulatory protein GabR
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
cgoi
Corynebacterium gottingense
Brite
KEGG Orthology (KO) [BR:
cgoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgoi03000
]
CGOTT_05955 (gabR)
Transcription factors [BR:
cgoi03000
]
Prokaryotic type
Helix-turn-helix
GntR family
CGOTT_05955 (gabR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
MarR
HTH_36
HTH_24
HTH_50
HTH_11
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
WJZ13122
LinkDB
All DBs
Position
1280570..1281934
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AA seq
454 aa
AA seq
DB search
MLLSVSPELPIPLPTQIAQQIRLAVTNGTLQPGDTVSSTRALARQLGVSRGTVVTAYDQL
ISEGFLLAAQGAPTRIHPALTLAPPAQGPQRDTRPRTTPRARVSLRPSAGSAGAVRPAAW
RKAWRDALNADGASLDKTGEPELRAAIAEHLRLARGIQVDPAHVVVTGGSREGLQLILYT
LGSGLCVGVEDPGHPGLRRVIPLGGHEVVPCATDPGGVVVGELSDRLNALLVTPSHLYPF
GGAMSASRRSALLNWATRTGAVLIEDDFNTELRYLISPQPPLAALSPGADVLTLGTFSTL
LSRELAAGYVVASPALAPALRETRELLGMPVATVTQRAIAHLLDRGYVRRNARAAHNRLA
RRRKAVAATVVPALEARGARVTVPEAGGADVTAEFPTVALRQQFEDQLAASGVECGHESS
LWSGGGDGLVLSFSHLTDEDFEYALGAIHPEKTA
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
gtgctcctcagcgtctcccccgagctgcctatccccttgcccacgcagatcgcacagcag
attcggctcgcggttaccaacggcacgctgcagcccggagacacggtctccagcacacgc
gcactcgcccgccagctcggagtctcccgcggcacggtcgttaccgcctacgaccaactc
atcagtgagggcttcctcctcgccgcgcagggcgcaccgacgcggatccacccggcgctc
acgcttgcgccaccggcgcaggggccgcagcgcgacacgcgcccaaggacgacaccccgg
gcccgggtctcattgcggccgtctgcgggcagcgccggagcagttcgaccggccgcgtgg
cgcaaggcctggagggacgccctcaacgcggacggtgccagcctggataagaccggagaa
ccagaactcagagccgccatcgccgagcacctgcgcctcgcgcgcggcatacaggtcgac
cccgcacacgtggtggtcaccggaggatcgcgcgaagggctgcagctcatcctgtacacg
ctgggttcggggctgtgcgtgggtgttgaagacccgggccaccccggcctgcgtcgcgtg
atccccctcggcggacacgaggtggtcccctgcgccaccgatcccggtggggtggtcgtc
ggcgagctttcagaccgcctcaacgcgctcttggtcactccgtcccacctgtaccccttc
ggcggtgcgatgagcgcctcgcgccgctccgcactgctcaactgggcgacgcggaccggc
gccgtgctcatcgaggacgacttcaacaccgagctgcgctacctcatctcgccgcagccc
ccgctcgcggcgctgtcgccgggggccgacgtgctcacgctcggcacgttctccacgctc
ctctcccgcgagctcgccgcggggtatgtcgtggcctcccccgcgctcgctcccgcgctg
cgggagacccgagagctcctgggaatgccggtggccacggtgacgcagcgcgccattgcg
cacctcctcgaccgcggctacgtgcgccggaacgcgcgtgcagcgcacaaccggctcgcg
cgacggcgcaaagccgttgccgccacggtggtccccgccctggaagcgcgcggcgcgcga
gtgaccgtgccggaagcaggcggcgcagacgtcaccgccgagtttcccaccgttgcactg
cggcaacagttcgaggaccaacttgccgccagcggcgtggagtgcggccacgagtccagc
ctgtggtcgggcggtggggatgggcttgtcctgagcttttcgcacctgacggatgaggac
ttcgagtacgcgctcggggccatccacccggaaaagacggcctga
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