Corynebacterium gottingense: CGOTT_07525
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Entry
CGOTT_07525 CDS
T09376
Symbol
fpg1
Name
(GenBank) Formamidopyrimidine-DNA glycosylase 1
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
cgoi
Corynebacterium gottingense
Pathway
cgoi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cgoi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CGOTT_07525 (fpg1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgoi03400
]
CGOTT_07525 (fpg1)
Enzymes [BR:
cgoi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CGOTT_07525 (fpg1)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CGOTT_07525 (fpg1)
DNA repair and recombination proteins [BR:
cgoi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CGOTT_07525 (fpg1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_6
DUF7573
NFACT_N
Zn_ribbon_FGT1_1
Auto_anti-p27
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
WJZ13424
LinkDB
All DBs
Position
complement(1605549..1606403)
Genome browser
AA seq
284 aa
AA seq
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MPELPEVEVVRRGLDRHVVGRTFTAVEVLHPRAVRGNTHDLAAVLPGTTITGTGRRGKFM
WLTLDCADALVIHLRMSGQMLVGAPGSVDSPHLRIRALLGGSGRDSAVAGEPLELDFVDQ
RTFGLWQYAPFSGDVPEPVAHIAPDPFEDDFDAVATARLIRTKRSAIKTVLLNQEVVSGI
GSIYADEAMWAAGVRPSKSARSLRQRDTIALLDHARDVMARALEQGGTSFDSLYVNVNGA
SGYFSRSLNAYGQAGAPCARCGTPIERMVVGGRSSFYCPQCQRG
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgaactgccagaggtggaggtggtccgccgcgggctcgatcgccacgtggtcggc
cgcacgttcaccgcggtcgaggtgctgcacccccgcgcggtccgcgggaacacccacgac
ctcgcagctgtcctgcccggaacaaccattaccggcaccgggcggcgcggcaagttcatg
tggctcacgctggattgcgccgacgcccttgtcatccacctccgcatgagcgggcagatg
ctcgtcggcgctccgggcagcgttgacagcccgcacctgcgcattcgggccctgcttggc
ggttccggccgcgatagcgcagtggcaggggagccgctcgagctggacttcgtggaccag
cgcaccttcgggctgtggcagtacgccccgttttccggcgatgtgcccgaaccagtcgcg
cacattgccccggacccgttcgaggacgactttgacgcggttgcaacggcgcgcctgatt
cgcacgaaacgctcggcgattaagacggtgttgctcaaccaagaggtggtgagcgggatc
gggtcgatttatgccgatgaggcgatgtgggcggcgggcgtgaggccgtcgaaaagcgcc
cgctcgctgcgccaacgcgacaccatcgcgctgttggaccacgcgcgggacgtgatggca
cgcgccctcgagcagggcggcaccagtttcgattccctctacgtcaacgtcaacggcgcc
tcagggtacttctcgcgctcgttaaacgcatacgggcaagcgggcgcaccgtgcgcccgt
tgcgggacccccatcgaacggatggtggtgggcgggcgctccagcttctactgcccccag
tgccaacgcggctaa
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