Cytobacillus gottheilii: J1899_00680
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Entry
J1899_00680 CDS
T07465
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
cgot
Cytobacillus gottheilii
Pathway
cgot03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cgot00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
J1899_00680 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgot03021
]
J1899_00680 (rpoB)
03400 DNA repair and recombination proteins [BR:
cgot03400
]
J1899_00680 (rpoB)
Enzymes [BR:
cgot01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
J1899_00680 (rpoB)
Transcription machinery [BR:
cgot03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
J1899_00680 (rpoB)
DNA repair and recombination proteins [BR:
cgot03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
J1899_00680 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
QVY61698
UniProt:
A0ABX8FBD3
LinkDB
All DBs
Position
128344..131904
Genome browser
AA seq
1186 aa
AA seq
DB search
MTGQLVQYGRHRQRRSYARISEVLELPNLIEIQTSSYQWFLDEGLREMFHDISPIEDFTG
NLSLEFIDYSLGEPKYSVEESKERDVTYSAPLRVKVRLVNKETGEVKDQDVFMGDFPLMT
ETGTFVINGAERVIVSQLVRSPSVYYSGKLDKNGKKGFTATVIPNRGAWLEYETDAKDVV
YVRIDRTRKLPVTVLLRALGFGSDQEIIDLIGDNEYIRNTLEKDNTEGIDKALLEIYERL
RPGEPPTVENAKSLLLSRFFDPKRYDLANVGRYKINKKLHIKNRLFGQRLAETLVDPETG
EIIAEKGATLDRRTLDRILPNLEKNIGFKSVNLLGGVISDDVELQSIKIYAPNEDGEKAI
NVIGNAYVEEAVKNISPSDIIASISYFFNLLHGVGDTDDIDHLGNRRLRSVGELLQNQFR
IGLSRMERVVRERMSIQDTNTITPQQLINIRPVIASIKEFFGSSQLSQFMDQTNPLAELT
HKRRLSALGPGGLTRERAGFEVRDVHYSHYGRMCPIETPEGPNIGLINSLSSFAKVNRFG
FIETPYRRIDPDTGKVTSRIDYLTADEEDNYVVAQANAVLGEDGSFLDEEVVSRFKGENT
VVSRDRIDYMDVSPKQVVSAATACIPFLENDDSNRALMGANMQRQAVPLMQPEAPRVGTG
MEYVSGKDSGAAVICKHEGIVEHVEAREVWVRRINVVDGQEVKGDLDKYRMLKFIRSNQG
TCYNQRPIVAVGNRVTKGEILADGPSMELGELALGRNVLVAFMTWDGYNYEDAIIMSERL
VKDDVYTSIHIEEYESESRDTKLGPEEITRDIPNVGEDALRNLDERGIIRTGAEVKDGDL
LVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGGGGIVLDVKVFNREDGDEL
PPGVNQLVRVYIVQKRKISEGDKMAGRHGNKGVISRILPEEDMPYLPDGTPVDIMLNPLG
VPSRMNIGQVLELHLGMAARALGIHVASPVFDGANEEDVWETIEEAGMARDAKTVLYDGR
SGEPFDNRVSVGVMYMIKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVW
ALEAYGAAYTLQEILTVKSDDVVGRVKTYESIVKGENVPEPGVPESFKVLIKELQSLGMD
VKILSGDEEEIEMRDLEDEEEIQQAESLTIAPDTANEESEKVAAKE
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
ttgacaggtcaactagttcagtatggacgacaccgccaacgtagaagttacgcgcgaatc
agtgaagttttagaattaccaaatctaatcgaaatccaaacctcttcttatcaatggttt
cttgatgagggtttacgtgaaatgtttcatgacatttctccgattgaagactttactggt
aatttgtcgcttgaatttattgattacagccttggcgaaccaaaatattccgttgaggaa
tcgaaagaacgagatgttacatactctgcaccactgcgtgtaaaagtgcgtcttgtaaac
aaagaaacaggcgaagtgaaagaccaggatgtctttatgggtgatttcccgttaatgaca
gagacaggtacgttcgtaattaatggagcggaacgtgtcatcgtttcccagcttgtgcgt
tctcctagcgtatattacagcgggaagcttgataaaaatggaaagaaaggttttactgcg
acagtaattccgaaccgcggcgcttggcttgagtatgaaacagatgccaaagatgtcgta
tacgttagaatagatcgtactcggaaactgcccgttacggttcttttgcgtgcacttggg
ttcggctctgatcaagagatcattgatttaattggggataatgaatatatccgcaatacg
cttgaaaaagataacacggaaggtatcgataaagcgctattagaaatttatgagcgtctt
cgtccgggtgaaccgccaactgtggaaaatgctaaaagtcttctattgtcaagattcttt
gatccaaagagatatgatttggcaaatgttggccgttacaagattaataaaaagcttcat
attaaaaatagattatttggtcagagattggcagaaacacttgttgatccagaaacaggc
gaaattatcgcggaaaaaggtgcgactttagaccgtcgtacattagaccgtattttgcct
aaccttgaaaagaatatcggtttcaaatctgtaaatcttttaggcggagttatttcagat
gatgtagaacttcagtctattaaaatttatgcacctaatgaagacggggaaaaagcgatt
aacgttattggaaatgcgtacgttgaggaagcagtgaagaacatttcaccttctgatatt
attgcgtccatcagttacttctttaacctgctgcatggtgtaggtgatacagatgatatc
gatcacttaggaaacagacgtctgcgttctgttggagaattgcttcaaaaccaattccgt
attggtttatccagaatggaacgtgtggttcgtgaaagaatgtcaatccaggatacaaat
acgattactccacagcagttaatcaatattcgtcctgttattgcatctattaaagagttc
ttcggaagctctcagctttctcagttcatggatcagacaaacccattagcagaattaaca
cataaacgccgtttatctgccttagggccaggtggtttgacgcgtgagcgtgcaggcttt
gaagttcgtgacgttcactactctcactacggccgcatgtgtccaattgagacaccagag
ggtccgaacatcggtttgatcaactctctttcatcttttgcaaaagtgaatcgtttcggc
tttattgaaacaccttaccgccgtatcgatcctgatacaggtaaagtgacatcccgaatc
gactatttaacagctgatgaagaggataactatgttgttgcacaggcaaacgctgtttta
ggcgaagatggctctttccttgatgaagaagttgtttcacgctttaaaggtgagaacaca
gttgtaagcagagatcgcatcgattacatggatgtatctcctaagcaggttgtttctgcc
gcaacagcttgtattccgttccttgaaaacgatgactctaaccgtgctcttatgggagcg
aacatgcaacgtcaagcggttcctcttatgcagccggaagctcctcgtgtaggaacaggt
atggagtatgtatcagggaaagactctggtgctgctgtgatctgtaagcatgaaggtatt
gttgagcatgtggaagcacgcgaagtttgggtgcgacgcattaatgtagtagatggccaa
gaagtaaaaggcgatcttgataagtacagaatgttaaaattcatccgttccaaccaagga
acttgctataaccagcgtccaatcgttgctgtaggaaaccgtgtaacaaaaggagaaatc
cttgctgacggtccatctatggaacttggggaattagcattaggacgaaatgttcttgta
gcgtttatgacttgggatggatataactacgaggatgcgatcattatgagtgagcgcctt
gtaaaagatgatgtatatacttctattcatattgaagaatatgaatcagaatctcgtgat
acaaagcttggacctgaagagattacaagagatatccctaacgttggggaagatgctctt
cgcaacctcgatgaacgcggaattatccgtacaggtgcagaagtaaaagatggtgatctt
cttgttgggaaagtaactcctaaaggggtaacagaactaacggcagaagaaagattatta
catgcgatctttggtgagaaagctcgtgaagtccgtgatacttctcttcgtgtgccacat
ggcggcggcggaattgtattggatgtaaaagtatttaatcgtgaagatggagacgaattg
cctccaggtgtaaaccagctcgttcgcgtctatattgttcagaagcgtaagatttctgaa
ggagataaaatggccggacgtcacggaaacaaaggggttatatccagaatcttaccagaa
gaggatatgccttaccttccagacggaacacctgttgacatcatgttaaacccacttggg
gttccatctcgtatgaacattggtcaggtgcttgagcttcatcttggtatggctgcaaga
gcattaggcatccacgttgcttctccagtatttgatggagcaaacgaggaagatgtttgg
gaaacaattgaagaagctggtatggcaagagatgctaaaacggttctttacgatggccgt
tcaggtgagccttttgacaaccgtgtatctgtaggtgtcatgtacatgattaaacttgca
cacatggttgatgacaagctccatgcccgttcaacaggaccttactctctagttacgcag
cagccgttgggcggtaaagctcaatttggcggacagcgtttcggtgagatggaggtttgg
gcacttgaagcttacggtgcagcctatacacttcaggagatcttaacggttaaatctgat
gatgttgtaggacgtgttaaaacatacgaatcaattgttaaaggtgaaaatgtccctgag
ccaggtgtacctgaatcgtttaaagtattaatcaaagaacttcaaagcttaggtatggac
gtgaaaatcctatctggcgatgaagaagaaattgaaatgagagaccttgaggacgaagaa
gagattcagcaagctgaatcccttacaattgctccagatacagcaaacgaagaatctgaa
aaggttgcagcaaaagaataa
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