Cytobacillus gottheilii: J1899_00685
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Entry
J1899_00685 CDS
T07465
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
cgot
Cytobacillus gottheilii
Pathway
cgot03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cgot00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
J1899_00685 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgot03021
]
J1899_00685 (rpoC)
03400 DNA repair and recombination proteins [BR:
cgot03400
]
J1899_00685 (rpoC)
Enzymes [BR:
cgot01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
J1899_00685 (rpoC)
Transcription machinery [BR:
cgot03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
J1899_00685 (rpoC)
DNA repair and recombination proteins [BR:
cgot03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
J1899_00685 (rpoC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
QVY61699
UniProt:
A0ABX8FBW6
LinkDB
All DBs
Position
132002..135601
Genome browser
AA seq
1199 aa
AA seq
DB search
MLDVNNFEYMKIGLASPDKIRSWSHGEVKKPETINYRTLKPEKDGLFCERIFGPTKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRALEEVIYFASYVVTDSGDTALEKKQLLSEKEYRAYREKYGTKFQASMGAESIKKLLS
EIDLNKEADTLKEELRTAQGQRRTRAIKRLEVIEAFRGSGNEPSWMILDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPSIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPNLKMYQCGLPKE
MALELFKPFVMKELVEKGLAHNIKSAKRKIERVQPEVWDVLESVIKEHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSSEAQAEARLLMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTLEREGAVGEGMIFNDTSEALLAYQNGYVHLHTRVAVN
ASSLNNQTFTEEQNNQLLITTVGKLIFNEILPETFPFINEPTKTNLEEETPKKYFVDPGT
DVPAAIMEMPLVDPFKKKILGNIIAEVFKRFKITETSKMLDRMKNLGFRYSTKAGITVGV
SDIVVLGDKEQIIQEAQNKVDNVTKQFRRGLITEDERYDRVISIWSAAKDDIQSRLMKSL
DKSNPIFMMSDSGARGNASNFTQLAGMRGLMANPAGRIIELPIKSSFREGLTVLEYFIST
HGARKGLADTALKTADSGYLTRRLVDVAQDVIVRDDDCGTDRGLEISALKDGTEVIEALD
ERLIGRYARRTVKHPETKEIIVAENDLITEDIAVQIIDAGIETVWIRSAFTCNTRHGVCK
KCYGRNLATGQEVEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQEIF
EARNPKGQAVISEIDGVIVGINEGRDRQHEIVVQGEVESRTYNAPYTARLKVAVNDRVER
GQELTEGSIDPKELIKVKDVTAVQEYLLREVQKVYRMQGVEIGDKHIEVMVRQMLRKVRV
IDAAETDVLPGTLLDIHQFTDANEKALLAGKIPATGRPVLLGITKASLETDSFLSAASFQ
ETTRVLTDAAIKGKRDELLGLKENVIIGKLVPAGTGMQRYRTAEPYTANEAAEDAVTVE
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
ttgctagatgtaaataattttgagtatatgaaaataggtctagcttcacctgacaagatc
cgttcttggtcacatggtgaggtaaaaaaacctgaaacgattaactatcgtacattaaag
ccagaaaaggacggtttgttctgtgaacgcatttttggtcctacaaaagactgggaatgt
cattgcggaaaatacaaacgagttcgttacaaaggtgtagtttgtgaccgatgcggcgtt
gaagtaacacgtgcaaaagtccgtcgtgaaagaatgggtcatattgagcttgcggctcct
gtttctcatatttggtacttcaaagggatccctagccgtatggggcttgttttggatatg
tcaccgcgtgcattggaagaggttatttacttcgcatcctatgtagtgacagattctggt
gatacagcgctagagaaaaagcagctgttatccgaaaaggaataccgtgcataccgtgaa
aaatacggaacaaagttccaagcatcaatgggtgctgaatccattaaaaaacttctttca
gaaatcgacctaaataaagaggctgatacccttaaagaagaactgcgtactgctcaaggg
cagcgtcgtacacgtgcaattaaaagattagaagtaattgaagcattccgtggttctggc
aatgaaccttcttggatgattcttgatgttcttcctgttattcctccagagcttcgccca
atggtacagttagatggcggacgtttcgctacttctgacttaaacgacctttaccgtcgt
gttatcaaccgtaataatcgtttaaaacgtttattagaccttggtgctccaagcatcatt
gttcaaaacgaaaaacgtatgcttcaagaagcggttgatgcattaatcgataatggccgt
cgcggcagaccagtcactggaccaggtaaccgtccattaaaatcattgtcacatatgcta
aaaggtaagcaaggacgtttccgtcaaaaccttctgggtaaacgtgttgactactcaggc
cgttccgttatcgttgtaggaccgaacctgaaaatgtatcagtgcggattaccaaaagaa
atggcattagagctatttaagccttttgttatgaaggaattggttgaaaagggtcttgct
cataatattaaatctgcaaaacgcaaaattgaaagagtacagccggaagtttgggatgtg
ctagaaagtgttattaaagaacatccagttcttcttaaccgtgcccctactctgcataga
cttggaattcaggcatttgagcctacacttgtagaaggccgtgcaatccgtctgcatccg
ctcgtatgtacagcttataacgctgactttgacggagaccaaatggctgttcacgttccg
ctttcttcagaagctcaagctgaagcaagacttctaatgctagcggcacaaaacatcttg
aacccgaaagatggaaaaccagttgtaacaccttctcaggatatggtactaggtaactac
tacttaactcttgaaagagaaggagcagttggagaaggaatgatctttaatgatacgagt
gaagcgctattagcataccaaaatggatatgttcatcttcacacgagagtagcagttaat
gcttcttcattaaacaatcaaacctttacagaagagcaaaacaaccagctattaattacg
acagttggaaaactgatctttaacgagattttacctgagacattcccattcattaatgag
cctacaaaaacaaacttagaagaagaaacacctaagaagtactttgtagatcctggtaca
gacgtacctgcagcaatcatggaaatgccgcttgtagatccgttcaagaagaaaattcta
ggtaatattattgcggaagtatttaaacgctttaagattactgaaacatctaaaatgctt
gaccgcatgaaaaatcttggattccgctactctacaaaagccggtattactgttggtgta
tccgacatcgtagtattaggtgataaagagcagatcatccaagaagcacaaaataaggtt
gataatgtcacaaagcaattcagacgtggtttaatcacagaagatgagcgttatgacaga
gttatttccatctggagtgctgcgaaggatgatatccaatcaagattgatgaaatccctt
gataaatcgaacccgatattcatgatgagtgattccggagcccgtggtaacgcgtctaac
tttacacagcttgctggtatgcgcggactaatggccaacccggctggacgtatcattgaa
cttccgattaaatcaagtttccgtgaaggtctaacagtattggaatacttcatctccact
cacggtgcgcgtaaaggtcttgccgatacagctcttaagacagctgactcaggttactta
acacgccgtcttgttgatgttgctcaagatgttatcgttcgtgatgatgattgtggtact
gaccgcggtcttgagatttcagccttaaaggatggcacagaagtaatcgaagctcttgac
gaacgtttaattggacgttatgcaagaagaacggtgaagcatcctgaaacaaaagaaatt
atcgtcgctgagaatgatctaattacagaagacatcgctgttcaaattattgatgcaggc
attgagactgtgtggatccgttcagcatttacttgtaatactcgccacggtgtatgtaag
aagtgttatggccgcaaccttgcaacaggtcaagaggttgaggttggggaagcagttggt
atcattgctgctcaatccatcggtgagccaggtacacagttaacaatgcgtactttccat
acaggcggggttgcgggagacgatatcacacaaggtctaccgcgtatccaggagatcttt
gaagcgcgtaatcctaaaggtcaggcagtcatttctgaaatcgatggtgtgatcgtaggc
attaatgaaggccgcgaccgccagcatgaaatcgtcgttcaaggcgaagttgaatcacgc
acatataatgcgccatatacagcgcgtttaaaagttgctgtcaacgaccgagttgaacgc
ggacaggaattaactgaaggttcaattgacccgaaagagttaatcaaagtcaaagatgtt
acagcagttcaagaatacttactgcgtgaggtacagaaagtttatcgtatgcaaggggtt
gaaattggggataagcatatcgaagtaatggtacgccaaatgcttcgtaaagttcgtgtc
attgatgcggctgaaacagatgtgcttccaggtacattgcttgatatccaccagttcact
gatgcaaacgaaaaagctcttcttgcagggaaaattcctgcaaccggccgcccagtatta
cttggaatcacaaaagcttcactcgaaacggattcattcttatctgctgcatccttccaa
gaaacaacaagagttcttacggatgctgcaattaaaggaaaacgtgatgagctgcttggc
ttgaaggaaaatgttatcatcggtaagcttgtacctgccggaacaggcatgcagcgttac
cggacagcagaaccttatactgccaacgaagctgctgaagatgcagtaacagttgaataa
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