Cytobacillus gottheilii: J1899_01915
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Entry
J1899_01915 CDS
T07465
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cgot
Cytobacillus gottheilii
Pathway
cgot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cgot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
J1899_01915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgot03019
]
J1899_01915
03009 Ribosome biogenesis [BR:
cgot03009
]
J1899_01915
Enzymes [BR:
cgot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
J1899_01915
Messenger RNA biogenesis [BR:
cgot03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
J1899_01915
Ribosome biogenesis [BR:
cgot03009
]
Prokaryotic type
rRNA helicases
J1899_01915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
QVY61911
LinkDB
All DBs
Position
367783..369282
Genome browser
AA seq
499 aa
AA seq
DB search
MNIVTKFQDLGISPATMKSLNRMGFEEATPIQAQTIPLSLENKDLIGQAQTGTGKTAAFG
IPMIDKIDYEKNVIQGIVIAPTRELAIQVSEELYKIGFGKRTRVLSIYGGQDINRQIRAL
KNKPHIIVGTPGRILDHIKRKTLRLDNVHTAILDEADEMLNMGFIDDIEAILSSIPEERQ
TLLFSATMPEPIRKMAARFMKEPQIVRVKAKEMTVSLIDQYYIEVQEKNKFDVLTRLLDI
QSPELAIVFGRTKRRVDELAEALTLRGYMAEGIHGDLSQAKRISVLRKFKEGSIDVLVAT
DVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKEGVAMTFINPREKSYLHVVER
TTKRKMERMDAPTLDEALEGQQKAVVEKVAQTIEENNLSYYKQTAEELLANQDAVAVVQA
MLKMLTKEPDTTPVKLTEEKPLPMKRDRKPYDRSKSYNGGQRNRSNGQYKPRQGHAGKRS
NYNNSNNKSNSNSNSNTYR
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgaatatagtgacaaagtttcaagatttgggcataagcccagctacaatgaagtcttta
aatagaatgggatttgaagaggcgacgccaattcaagcgcaaaccattccacttagcctg
gaaaataaagatttaatcggtcaagcccaaacgggaaccgggaaaacagctgcatttgga
attccaatgattgataaaattgattatgaaaaaaatgtaatccaaggaattgtcattgct
ccaactcgtgaactggcgattcaagtatctgaagaactgtataagattggctttggaaaa
cgcacaagagttctttctatatacggcggccaggatatcaacagacagatccgcgcttta
aaaaataaacctcatatcattgtaggaacacctggacgtattctggatcatattaagcgt
aaaacacttcgtttagacaacgtgcatactgcgatccttgatgaagcggatgaaatgctg
aatatgggctttattgacgatattgaagcgatcctatccagcattcctgaagaacgtcaa
acacttctattctcagctacaatgccagagccgatccgcaaaatggcagctcgcttcatg
aaagaaccgcaaattgttcgtgtaaaagcaaaagaaatgacagtatcacttatcgatcaa
tattacattgaagtgcaagagaagaataaatttgatgtgctgacacgactgcttgatatc
cagtcaccagagcttgcgattgtttttggacggacaaagcgccgggttgatgagcttgca
gaggctttgacgctaagaggctatatggctgaaggaattcacggtgacttaagccaggca
aaacgtatttccgttttacgcaagtttaaggaaggttctattgacgttttagttgctaca
gacgtagctgcacgcggcttggacatttcaggggttacgcatgtatataactttgatatt
cctcaagatccagaaagctatgtccaccgtattggccgtacagggcgtgctggtaaagaa
ggtgtagcaatgacgttcatcaacccgcgtgaaaaatcctatttgcatgtggttgagcgt
acaacaaagcgtaaaatggaacgcatggatgctccaacacttgatgaagcgttggaaggc
cagcaaaaggctgtcgttgaaaaagtggcgcaaacaattgaagaaaacaacctttcttat
tacaagcaaacagcagaagaattactggcaaatcaggatgctgttgcagttgttcaagca
atgcttaagatgctgacgaaggaaccggacacaacacctgttaaattaacagaagaaaag
ccgctgccaatgaagcgcgacagaaagccttatgaccgcagcaaaagttataatggcggg
caaagaaaccgttcaaatggacaatacaaacctcgccaaggtcatgcaggcaaaagatct
aattacaataacagtaataataaatcaaattcaaattcaaattcaaatacgtatcgttaa
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