Cytobacillus gottheilii: J1899_04385
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Entry
J1899_04385 CDS
T07465
Name
(GenBank) 3'-5' exoribonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
cgot
Cytobacillus gottheilii
Pathway
cgot03030
DNA replication
cgot03430
Mismatch repair
cgot03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cgot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J1899_04385
03430 Mismatch repair
J1899_04385
03440 Homologous recombination
J1899_04385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cgot03032
]
J1899_04385
03400 DNA repair and recombination proteins [BR:
cgot03400
]
J1899_04385
Enzymes [BR:
cgot01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
J1899_04385
DNA replication proteins [BR:
cgot03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
J1899_04385
DNA repair and recombination proteins [BR:
cgot03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
J1899_04385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
BRCT
PCI
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
QVY62346
LinkDB
All DBs
Position
complement(911150..912133)
Genome browser
AA seq
327 aa
AA seq
DB search
MDFIAIDFEIANNRLDSACSIGMAFVQNNSIIDEKYYLIQPPTLFMDPGMVRVHGITEDD
VRNAPTFDEVWKEIQQYFQGEHLIIAHNAQFDMSVLKNCLLTYKLDIPEFTYACSIPISS
CALGRERVSGSLKDRAERFGVQLDQHHHALSDAITCAQLVINCVKAKRRKSLETFLSTYR
SVSLKSFSELKHQTTFGKKTAVPAKKRFASAPVISSITTSKTEFDEQHPLYGKHIVFTGE
LAGMDRAEAMQQVVDHGGLLKSGVTKQTSYLVVGTQDKALVGSAGVSSKEKKAAALQAEG
LPIKIINEEHFRKLIAGRMSLSFKQSQ
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggattttattgcgattgactttgaaattgccaataaccgtctggacagcgcctgttca
atcggaatggcatttgttcaaaacaactcaattatagacgaaaaatattatcttattcag
cctccaacattgttcatggatcctgggatggtgcgggtgcatggaattactgaagatgat
gttagaaatgcacctacatttgatgaagtgtggaaggagattcagcaatattttcaagga
gagcatctcataattgctcataatgctcagtttgatatgagtgtgctgaaaaactgcttg
ctcacatacaaactggatatccctgaattcacttatgcatgcagtattcccatcagctca
tgtgcacttggccgtgaaagagtcagcggctctctcaaggatcgagctgaacgttttggc
gtccaattagatcagcatcatcatgctttatcagatgcaattacatgtgcacagcttgtc
atcaactgtgtcaaagcaaaaagacgtaaatcactggaaacatttttaagcacctatcgt
tctgtttcgttaaagtccttttcagaattaaagcaccaaactactttcggtaaaaaaaca
gcggtaccagcaaagaaacggtttgccagtgctccagtgatttcttctattacaacaagc
aaaacagagtttgatgaacagcatcctctttacggaaaacatattgtatttacaggtgaa
ttagctgggatggatcgtgcggaagccatgcagcaggttgtggatcatggcggattgctt
aaaagcggtgtaacaaaacaaaccagttatcttgttgtcggcacacaggataaagcactg
gttggcagtgctggtgtgagctcgaaggaaaaaaaggcggctgcactccaggcagaaggt
ctgccgattaaaataatcaatgaagaacacttccgaaaactgatagctgggcggatgagt
ttgagttttaagcagtcacagtga
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