Cytobacillus gottheilii: J1899_12175
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Entry
J1899_12175 CDS
T07465
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cgot
Cytobacillus gottheilii
Pathway
cgot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cgot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
J1899_12175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgot03019
]
J1899_12175
03009 Ribosome biogenesis [BR:
cgot03009
]
J1899_12175
Enzymes [BR:
cgot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
J1899_12175
Messenger RNA biogenesis [BR:
cgot03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
J1899_12175
Ribosome biogenesis [BR:
cgot03009
]
Prokaryotic type
rRNA helicases
J1899_12175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_19
DDOST_48kD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QVY59816
LinkDB
All DBs
Position
complement(2469773..2470948)
Genome browser
AA seq
391 aa
AA seq
DB search
MPNFNQLGLSPSLAAAVEQAGFIHPTDIQNKAIPQIIAGNDLVALAQTGTGKTFAFILPI
LDHVDPALNIIQALIVTPTRELALQVTDELEKLIHVKEGLNVLAVYGGQDVEKQLSSLSS
SVHIAVGTPGRIIDHMNRGSIDLAHVSMLVLDEADQMLHIGFLNEVEKIISACTAQRQTL
LFSATMPEDIKKLSVSYMNDPRLIETKKLYKKAEHIKQLAYYTTDRAKQQTLIDILRTHR
PFLAIIFCRTKRRVTKLYQSLMEKGFSCAELHGGLSQAKREETMRAFRENEFQLLIATDV
AARGLDVEGVTHVFNYDIPLDTDSYIHRIGRTGRAGMRGLAITLYTRAEMSKLEQIENDL
SAKLSKRTMEPQQPQQNREHHSKKRYGKHRK
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
ttgccgaattttaatcaattaggattatctccttcccttgcagcagctgttgaacaggct
ggatttattcatccgacagatattcaaaacaaagcgattccacagatcattgcaggaaac
gatcttgttgcattagcacagacaggaacaggaaaaacatttgcattcattttgcctatt
ttagatcatgtggatccggccttaaatatcattcaagccttaatcgttacacccactcga
gagctcgctcttcaagtaactgatgaactggaaaaattgattcatgttaaggaaggtctc
aatgtgctggcggtctatggcggtcaggatgttgaaaaacagctgtcatctctcagcagc
tcagtccatattgctgttggaacgcccggcaggatcattgaccatatgaatagaggcagt
attgatttagcacatgtatcaatgctggtccttgacgaagcagatcaaatgctccatatt
ggttttcttaatgaagttgaaaaaatcatctctgcgtgtacagctcagcgacagacgctg
cttttttctgctacaatgcctgaggatattaaaaagctatcagtatcatatatgaatgat
ccgcggctgatcgaaacgaaaaaattatataaaaaagctgaacatatcaaacagcttgcc
tactatacaactgatcgtgccaagcagcaaacgctgattgatattttgcgtacacatcgt
ccattcttagcgattatcttttgcagaaccaaaaggagagtgacgaaattatatcaatct
ttaatggaaaaaggattttcatgtgctgagctgcacggcggcctttcccaggcaaagcgg
gaagaaacgatgagagcgttccgagagaatgagtttcaacttttaatagcaacagatgtc
gcagcccgcggactcgatgtcgaaggtgtcacacatgtttttaattatgacattccactt
gatacagacagctatattcaccgcattggcaggactggaagagctggcatgagagggttg
gcgatcacattatatactagagcggaaatgtccaaacttgaacagattgaaaatgattta
tctgctaaactctccaaaaggacaatggaaccacaacagccgcaacaaaacagagaacat
cattcgaaaaaaagatatggaaaacatagaaaataa
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