Cytobacillus gottheilii: J1899_15310
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Entry
J1899_15310 CDS
T07465
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
cgot
Cytobacillus gottheilii
Pathway
cgot02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cgot00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
J1899_15310 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgot03021
]
J1899_15310 (rpoD)
Transcription machinery [BR:
cgot03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
J1899_15310 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Exonuc_VII_L
DUF2316
Motif
Other DBs
NCBI-ProteinID:
QVY60374
LinkDB
All DBs
Position
complement(3081393..3082517)
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AA seq
374 aa
AA seq
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MAEKSARSKEVDSELTLEQAKEQVLEVGKKTGVLAYDDIAERLANFELDSHQMDEFYEFL
GDQGIELVGDNDDADPNVKELAKGEEEFDLNDLSVPPGVKINDPVRMYLKEIGRVDLLTA
EEEISLANRIEEGDEEAKRRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLIKAVEK
FDYRKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRQLLQDLGREP
SPEEIAEDMDLTPEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQDATSPSEHAAYE
LLKEQLEDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKL
RHPSRSKRLKDFLE
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaaaatcggcccgttcaaaagaggttgattcagaattgacccttgaacaagca
aaagaacaagtgttagaggtaggaaagaagactggtgttctcgcctatgacgatatagca
gaaagattagccaactttgagttggattcacaccaaatggatgagttttatgagttcctt
ggagatcagggaattgaacttgtcggtgataatgacgatgcagatccaaacgtaaaggaa
cttgccaaaggtgaagaggaatttgaccttaatgatttaagtgtacctcctggggtgaaa
atcaacgatccagtccgcatgtatctgaaagaaattggccgtgttgacctactgactgca
gaggaagaaatttcattggcaaaccgcattgaagaaggcgatgaagaagcaaaacgccgt
cttgcagaagccaacttgcgcctagtagttagtatcgccaagcgttatgtcggacgcggt
atgttattcctggacttaattcaggaaggaaatatgggtcttattaaagctgttgagaaa
tttgattaccgtaaaggattcaaattcagcacctatgctacttggtggattcgtcaggct
attacgcgtgcgattgcagaccaggcaagaacgatcaggattcctgtgcatatggttgag
acgattaacaagttaattcgagtacagcgccagctgcttcaagatcttggccgtgaacct
tcaccagaagaaattgcggaagatatggacttaacacccgaaaaggtacgtgaaatccta
aagattgctcaagaacctgtttcacttgaaacaccgattggtgaagaggatgactcacat
cttggcgactttattgaagatcaggatgcaacttcaccttctgagcatgctgcctacgaa
ttattgaaggaacagctcgaagacgttcttgatacattaaccgatcgtgaagaaaatgtg
cttagacttcgttttggtcttgacgacggccgtacacgaacgcttgaagaagtcggcaaa
gtattcggggtaactcgtgagcgtatccgccaaattgaagcaaaagcacttcgcaaactt
agacatcctagtcgaagcaaaagacttaaggacttcttagaatag
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