Cytobacillus gottheilii: J1899_15495
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Entry
J1899_15495 CDS
T07465
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
cgot
Cytobacillus gottheilii
Pathway
cgot03030
DNA replication
cgot03430
Mismatch repair
cgot03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cgot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J1899_15495 (holA)
03430 Mismatch repair
J1899_15495 (holA)
03440 Homologous recombination
J1899_15495 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cgot03032
]
J1899_15495 (holA)
03400 DNA repair and recombination proteins [BR:
cgot03400
]
J1899_15495 (holA)
Enzymes [BR:
cgot01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
J1899_15495 (holA)
DNA replication proteins [BR:
cgot03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
J1899_15495 (holA)
DNA repair and recombination proteins [BR:
cgot03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
J1899_15495 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
QVY60410
LinkDB
All DBs
Position
complement(3121258..3122277)
Genome browser
AA seq
339 aa
AA seq
DB search
MFDIWKQIKGQRFAPVYLIYGTEPYLINETKQLLIEHSLNEDELDFNLASYDLEETPIET
ALEDAETLPFMGERRLILLQNPVFLTAEKSKSKVEHNVAKLEAYLKEPSPYSIVVFSGAY
EKLDERKKITKQLKKTAAIVEAKKLGENELKTWVRERAALNGVQIDEDAVELMLALAGTN
LFMLTSEIDKISLYADDEKRIDQQMVEKLVARSLEQNIFALVDKIVHRKIDEALRIFYDL
LKQNEEPIKILAVITGQFRLIYQVKELSRKGYGQNQMAGQLKIHPFRVKLAAGQAQLFDD
QELSAIMSQLADADYQMKTGGMNKTMLIEMFLFKLSASK
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgatatatggaaacaaattaaggggcagcgatttgcaccagtttatttaatttat
ggaacggagccttatctgataaatgaaacgaagcagctgctcattgagcatagtttaaat
gaggacgagcttgatttcaatttagcctcttacgacttggaagagacaccaattgaaaca
gctctggaagatgccgaaacactgccttttatgggagagcggcgcttaattctcctgcag
aatcccgtttttctaactgctgaaaaatccaagtccaaagtggagcacaatgtggcaaag
cttgaggcatatttaaaagagccttcaccttattccatcgttgtattttcaggagcatat
gaaaaattggatgagcgcaaaaaaatcacgaagcaacttaagaaaacagcagccattgta
gaggcaaaaaagctcggagaaaatgaattaaaaacctgggttcgtgagcgggcggcactg
aatggtgttcagattgatgaagatgctgttgaattaatgcttgcacttgcaggcaccaat
ttatttatgctgacaagtgagatagataaaatttctttatatgcggatgatgaaaaacgc
atagatcaacaaatggtagagaagcttgttgcacggtcattggaacaaaatatttttgcg
ctcgtagataaaattgtacatagaaaaattgatgaggcactgcggattttttacgatctc
ctcaaacaaaatgaagagccgatcaaaattttagcggtcattaccgggcagttcagactt
atctaccaggtgaaggagttatccagaaaaggctacggacaaaatcagatggctggtcag
ctgaaaatacatccattccgggtgaagcttgcagccggacaagcgcagctttttgatgat
caggaactatccgcaatcatgagccagctcgctgatgcagattatcagatgaaaacgggc
ggaatgaacaaaaccatgctgattgaaatgtttttatttaaattaagtgcgtcgaaataa
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