Cytobacillus gottheilii: J1899_16840
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Entry
J1899_16840 CDS
T07465
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cgot
Cytobacillus gottheilii
Pathway
cgot03030
DNA replication
cgot03430
Mismatch repair
cgot03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cgot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J1899_16840 (dnaE)
03430 Mismatch repair
J1899_16840 (dnaE)
03440 Homologous recombination
J1899_16840 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cgot03032
]
J1899_16840 (dnaE)
03400 DNA repair and recombination proteins [BR:
cgot03400
]
J1899_16840 (dnaE)
Enzymes [BR:
cgot01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
J1899_16840 (dnaE)
DNA replication proteins [BR:
cgot03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
J1899_16840 (dnaE)
DNA repair and recombination proteins [BR:
cgot03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
J1899_16840 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
tRNA_anti_2
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
QVY60660
LinkDB
All DBs
Position
complement(3404632..3407997)
Genome browser
AA seq
1121 aa
AA seq
DB search
MSFIHLHVYSAYSLLMSTAKVEDLAKQAKQLGFEAIALTDRNVMYGAVSFYKECLKNEIK
PILGLTADVVDDESEQAEPFPLVLLARNQTGYQNLLKISSVIGTKSPGGIPARWLKAYNQ
GLIMLSPGLEGKIEQHLINDEYEEAKKSACFYRDHCEEQQFYLSLHDHGISNEEKVRNGL
VQISSETGIELTAANAVHYLQKEDAFAQDCLTCIKNGEKIQAEDRMRLQGEEYNLKSAAE
MTGLLSMYPDALENTLKIAEQCNVMLELNGEHLPKYPAVDGLTSEQLLEKLCWQGYQERF
PQDTKVHKERLAYELSILKKMKYSDYFLIVYDFMKYCREHDILTGPGRGSAAGSMVAYVL
YITDVDPIAHGLLFERFLNPERISMPDIDIDFPDHRRDEVIQYVANKYGEMHVAQIVTFG
TMAAKAALRDVGRAFGLNTKELDRLSKSVPSKLGITLSEAYNSSDSLRRFTEESGLHKRL
FETALKLEGLPRHTSTHAAGVVISEMPLVSVVPIQAGHDQVYLTQYSMEYLENIGLLKMD
FLGLRNLSLIENIVNSINRHSKEKIDIKSIPVNDEHVFKLLSSGRTNGIFQFESAGMQRV
LKNLRPSSFEDIVAVNALYRPGPMENISLFIDRKHGKQEISYYHPDLKPILENTYGVIVY
QEQIMQIAAMMAGFTLGEADMLRRAVSKKQKEVLDQERTHFVAGALKKGYSEQTAHNIYD
LIVKFANYGFNRSHAVAYSLIAYQLAFLKANYPLHFMAALLSSSAGNEVKISQYIRELKD
LKLKVLPPSINKSWYTFTVEHHSVRYSLGAIKGIGGNVLKEIFKARGQQKFHDLFDFCMR
VSHKIANRKIIETLIHSGSFDEFGEDRAVLLASIDAALEHALLVNPDDEQADFFSDGEFF
PKPKYTIVDPITAEAKLAFEKEVLGLYLSDHPISVYENEQERMGTDIIAELDTSARQVKL
FVFLAELNKIRTKKGDTMAFITLSDQSGEVEGVIFPNVLNQYSHLLNKGRILFISGKPEE
RDGKKQIIVQSIQTPEQAIATFKPKEPILYLKITEQQETNEQLRKLKDLFRENSGAISVI
LYYESSGKRIKLGEEDCVHPTSIFMDRLKGLLGSENVILKR
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
gtgtcttttattcaccttcatgtgtatagtgcatatagcttgctgatgagtacagcaaaa
gtggaggacttggctaaacaagccaaacaacttggctttgaggcgattgcattaacagac
agaaacgtgatgtatggcgctgtctctttttataaggaatgcttaaaaaatgagataaag
cctattttaggtttaacagcagatgtagtagatgatgaatctgaacaggcagagccattt
cctctagtgttactggctagaaatcaaacaggctatcaaaatctgcttaagatttcgagt
gtgattggcacaaaatctccaggtggaattcctgcaagatggctaaaggcatataaccaa
ggcttaattatgctgagtccaggtcttgaagggaaaattgagcagcacttgattaatgac
gaatacgaagaagcgaaaaagtcagcatgtttctatcgggatcactgcgaggagcagcag
ttttatttatcgctgcatgatcatggaatatcaaatgaagaaaaagtgagaaatgggctt
gtgcaaatcagttcagaaacggggattgagcttactgctgcgaatgcggtgcattatttg
cagaaggaagacgcttttgcgcaagactgcctgacttgtattaaaaacggtgaaaagatt
caagctgaagacagaatgagactgcagggcgaagaatacaatctaaaatctgcagcggaa
atgactgggcttttatccatgtatcctgatgcgttggaaaatacgctaaaaatcgctgag
caatgcaatgtaatgcttgagctgaatggagaacatctgccaaaatatcctgcggtggat
ggtttaacgtcagaacaattactagaaaaattatgctggcaagggtatcaggaacgattt
cctcaggatacaaaagtgcataaggaacgtctggcatatgagttaagtattctaaagaaa
atgaaatacagcgactattttttaatagtctatgattttatgaaatattgccgagagcac
gatattttaacaggacctggccggggttcagcagccggttcgatggtggcttatgtactt
tatattacagatgtggacccaatcgctcacggattgctgttcgagcgtttcttgaaccct
gagagaatttctatgcctgatatcgatattgattttccagatcatcgccgggatgaagtg
attcagtatgtggccaacaagtatggcgaaatgcatgtagcccaaattgtgacctttgga
acgatggcagcaaaagctgcactgcgggatgttggcagagcttttggcttaaatacaaag
gagctggacaggctgtcaaagtcagtgccttccaagctggggattacactgagtgaggca
tataattcatccgattctctgcgaagatttacagaagaatcaggcctgcataaacgtcta
tttgaaacagcactaaaactggaaggattgccgcggcatacatctacacacgcagctgga
gtggtgatcagcgaaatgccgctagtttctgttgtccctatacaggcagggcatgatcaa
gtgtacctgacacaatactcaatggaatatttagagaatataggtctcttaaaaatggac
tttttgggattaagaaacttatcccttatcgaaaatatagtgaactccattaatagacat
tcaaaagaaaaaatagatattaagtctatccctgtaaatgacgaacatgtttttaaactg
ctgagcagcggcagaaccaatgggatttttcagtttgaatcagcagggatgcaaagagta
ctgaaaaatttgcgtccatcgtcctttgaagatatcgtcgccgttaatgccctctatcgt
ccaggtccaatggaaaacatttctctctttattgaccgtaagcatgggaaacaagagatt
tcatactaccatcctgacttaaagccgatccttgagaacacatatggtgttatcgtgtat
caggagcagattatgcagattgctgcgatgatggctggatttactttaggggaagcagat
atgctcagacgggcagttagtaagaaacagaaggaagtactggatcaagaacggactcat
tttgttgctggcgcattgaaaaaagggtattcagagcaaacggcacacaatatatatgat
ttaattgtgaaatttgctaactatggatttaacaggagccatgcggttgcttatagttta
attgcgtatcagctagcttttctaaaagcaaactacccgcttcattttatggcggccctg
ctttcatcctctgcaggcaatgaggtgaaaatctctcaatatattcgagagttaaaagac
ttgaaactcaaagtgctgcctccatccattaacaaaagctggtatacatttactgttgaa
caccattctgtccgctatagccttggtgctattaaagggataggaggaaatgttctaaag
gaaatcttcaaggcgcggggacagcagaaatttcatgatttatttgatttctgtatgcgc
gtttcccacaaaatagccaatagaaaaatcattgaaacacttatccattccggtagcttt
gatgaattcggtgaagaccgggcagtccttcttgccagcattgatgcagcattggagcat
gcattacttgtgaacccggatgatgagcaggctgacttcttttctgacggtgaatttttc
ccgaaacctaaatatacaatcgttgatccaataactgcagaagctaagctggcatttgaa
aaagaagtgctggggctgtatttgtctgaccaccctatatctgtttatgaaaatgagcag
gaaaggatggggacggatatcatcgctgaattggatacatcagcccgtcaggtaaagtta
ttcgtctttttagcagagttaaataaaattcgcactaaaaaaggggacacgatggcgttt
atcacacttagtgatcagagtggtgaagtagaaggagtcatctttccgaatgtcctaaat
caatattcgcatcttctaaacaaaggaaggattctcttcatatcaggcaagcccgaagaa
agggatggaaagaagcagatcattgtacaatcgatccagacaccagaacaggcaatagct
acatttaagccgaaagagcctatcctttatttgaaaattacagagcagcaggaaacaaat
gaacagctgcgaaagcttaaggatttgtttagagaaaattccggagctatttcagttatt
ctctattatgagagcagcggcaagaggatcaagcttggagaagaagattgtgttcatccc
acttcaatttttatggataggctaaaaggtttattaggcagtgaaaatgtgatattaaag
cgatag
DBGET
integrated database retrieval system
