Cytobacillus gottheilii: J1899_21885
Help
Entry
J1899_21885 CDS
T07465
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cgot
Cytobacillus gottheilii
Pathway
cgot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cgot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
J1899_21885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgot03019
]
J1899_21885
03009 Ribosome biogenesis [BR:
cgot03009
]
J1899_21885
Enzymes [BR:
cgot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
J1899_21885
Messenger RNA biogenesis [BR:
cgot03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
J1899_21885
Ribosome biogenesis [BR:
cgot03009
]
Prokaryotic type
rRNA helicases
J1899_21885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_19
NAT10_TcmA_helicase
Flavi_DEAD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QVY61548
UniProt:
A0ABX8FAW9
LinkDB
All DBs
Position
4455063..4456508
Genome browser
AA seq
481 aa
AA seq
DB search
MSNSRFAEYQLSEEIQRALTVLKYEDPTEVQSKVIPLALENQDLVVKAQTGSGKTASFGI
PLCEMVQWEEKKPQALILTPTRELAVQVREDMTNIGRFKRIKAVAVYGKEPFSKQRDELK
QKTHVVVGTPGRVLDHIDRETLELDQIKYLIIDEADEMLNRGFIDEVEDIIQALPSNRVT
MVFSATLPADIEKLCHQYMNHPTHIEIESNGVTADTIEHGLIEVTEEEKISLLKNITIAE
NPDSCLIFCRTKEHVDTLFSELDQAGYPCEKLHGGLEQEDRFAVMEGFKMGNFRYLVATD
VAARGIDIDNVNLVINYDVPMEKESYVHRTGRTGRAGNKGKAITFATPYEEKFIKAIERY
IGFEIPIIEAPSEEEIAGGKAAFEEKLSGRRVVRNNKTARINQDIMKLHFNGGKKKKIRA
VDFVGTIAKIPGVTAEDIGIITIHDQMSYVDILNGKGSLVLQAMENSTVKGKKLRVSKAI
K
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatagccgttttgcggagtatcagctgagtgaagaaatacagagagcactaacc
gttttaaaatacgaagatccaacagaagttcaaagcaaagtcataccattagcattggaa
aatcaagaccttgtcgtaaaagcccaaacaggaagcggaaaaactgcctcctttggtatt
cctctttgcgaaatggtccaatgggaagaaaagaaaccacaagccctgattcttactcca
acgagagagcttgctgttcaagtccgtgaagacatgacgaatatcggaaggtttaaacgc
attaaagcagtagctgtatacggaaaagaacctttctcgaaacaaagggatgaattgaag
caaaaaacacatgtggttgttggcacacctggacgtgttctggatcacattgaccgcgaa
actcttgaactggatcaaataaaatacctcattatcgatgaagctgatgagatgctgaat
agaggtttcattgatgaagtggaagacatcattcaagcacttccttcaaatcgggtaaca
atggtgttttctgctacattgcctgcagatattgagaagctttgtcatcaatatatgaat
catcctactcatattgaaattgaatcaaatggggtaacagccgatacaattgaacatggt
ttaattgaagtgactgaagaagaaaaaatctcacttcttaagaacatcacgattgcagaa
aacccagacagctgcctcatattctgccggacaaaagaacatgtagatacgctattcagc
gaacttgatcaagccggatatccttgtgagaagcttcacggcggacttgaacaagaagac
cgttttgctgttatggaaggctttaaaatggggaacttccgttaccttgtagccaccgat
gtggctgcgagaggcattgatattgataatgtaaatctcgtcatcaactatgatgttcca
atggaaaaagaaagctatgtgcaccgaacaggaagaacaggccgtgccggcaataaagga
aaagccattacgtttgctacaccttatgaagaaaagtttatcaaagccattgaaagatac
atcggctttgagattcctattatagaagctccgagtgaagaggaaatcgctggcgggaaa
gctgctttcgaagaaaaactcagcggccgtcgagttgtaagaaacaataaaacagccaga
atcaaccaagacattatgaagcttcatttcaacggcggcaaaaagaagaaaatccgcgct
gttgactttgttggaaccattgcaaaaatccctggagtaaccgcagaagatatcggcatt
atcaccatccacgatcaaatgtcgtatgttgatattctgaacggaaagggctcactcgtt
ttacaagcgatggagaattcaacggttaaagggaagaaattgagagttagtaaggcgatt
aaatag
DBGET
integrated database retrieval system
