Corynebacterium genitalium: KBP53_01580
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Entry
KBP53_01580 CDS
T10365
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
cgp Corynebacterium genitalium
Pathway
cgp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cgp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KBP53_01580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgp03021
]
KBP53_01580
03400 DNA repair and recombination proteins [BR:
cgp03400
]
KBP53_01580
Enzymes [BR:
cgp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KBP53_01580
Transcription machinery [BR:
cgp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KBP53_01580
DNA repair and recombination proteins [BR:
cgp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KBP53_01580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
UUA89695
LinkDB
All DBs
Position
324452..328462
Genome browser
AA seq
1336 aa
AA seq
DB search
MFDVNLFDELRIGLATAEDIRRWSHGEVKKPETINYRTLKPEKDGLFCERIFGPTRDWEC
SCGKYKRVRYKGIICERCGVEVTKSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLERIIYFAANIITSVDEEARHNDMSTLEAEMILEKKEIEQDTEAEIADRAQKLEED
LAELEASGAAASARKKVQNAADKEMQHMREAGEREIEHLDEIWNTFIKLAPKQMIIDENL
YEELVDRYEDYFTGGMGAEAIQTLIRNFDLDAESEELRHIIAEGKGQKKVRALKRLKVVA
AFQRSGNDPAGMILDAIPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRMIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIIVGPQLKMHECGLPKLMALELFKPFVMKRLVDNDYAQNIKSAKRMVERQR
PEVWDVLEEAIAEHPVLLNRAPTLHRLGIQAFEPVLVEGKAIQLHPLACEAFNADFDGDQ
MAVHLPLSAEAQAEARVLMLSSNNILSPASGKPLAMPRLDMVTGLYFLTMVKGEGEIGGE
GAYAPADENGPARGVYSSHREAIMAYDRGVLGLQAPIKVRIDHLRPTAEIEAEQFPDGWE
KGQSWMADTTLGRIMFNEMLPFNFPYQEGAMVRKGGKDKVLLGDIIQAMVEKYPMITVAQ
TMDKLKDAGFYWATRSGITITMSDVLVLPNKTEILDEYEREAEAIERKYFEKGALTEKDR
YDRLVELWQDATDKVGKAVEALYPDDNPIPMIVKSGAAGNMRQIWTLAGMKGMVVNSRGE
YITRPIKTSFREGLSVMEYFNNSHGSRKGLADTALRTADSGYLTRRLVDVAQDVIVREED
CGTHQGVKVPVAEAAGTGRFNRHDLVETSVSGRVLASDATDADGNVLLEAGSDLSEERID
ALVDAGIESVKVRSVLTCQTPTGVCAKCYGKSMATGKLVDIGEAVGIVAAQSIGEPGTQL
TMRTFHQGGVGGDITGGLPRVQELFEARVPKNRAPIASVAGEISLEDEGNFWTLTIHPED
GSDDVVYEKLSKRQGLAQVRRPMESNPEAMIERSLRDGDTVKVGDRLLRGAADPHDVLEV
LGRRGVEKHLIDEVQAVYRTQGVSIHDKHIEIIIRQMLRRGTVIDAGSTEFLPGTLVDLS
EARQINGQAVAEGGEPAELRSEIMGITKASLATESWLSAASFQETTRVLTDAAINKRSDK
LIGLKENVIIGKLIPAGTGISRYRNISVKPTEAARSAAYSIPTFGDAIYGDEGYGEFTGA
SVPLDEYGMGGYDSYQ
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgacgtaaacctcttcgacgagctccgcatcggcctggccaccgccgaagacatc
cgccgttggtcccacggcgaagtcaagaagccggagaccattaactaccgcaccctcaag
ccggagaaggacggtctgttctgcgagcgcatcttcggcccgacccgcgactgggaatgc
tcttgcggtaagtacaagcgtgtccgctacaagggcatcatttgtgagcgctgcggtgtt
gaggtgaccaagtccaaggtccgccgtgagcgcatgggccacattgagctggctgctccc
gtcacccacatctggtacttcaagggtgtgccgtcccgcctgggttacctgctggacctg
gcgccgaaggaccttgagcgcatcatttacttcgccgccaacatcatcacgtccgttgac
gaggaggcgcgtcacaacgacatgtccaccctcgaggcggagatgatcctggagaagaag
gaaatcgagcaggacaccgaggctgagatcgccgaccgtgcccagaagctcgaggaagac
ctcgctgagctggaagcttccggtgctgctgcgtctgcccgcaagaaggtgcagaacgcc
gctgacaaggaaatgcagcacatgcgcgaggctggcgagcgcgagatcgagcacctggac
gagatctggaacaccttcatcaagctcgctccgaagcagatgatcatcgacgagaacctc
tacgaagagctcgtcgaccgctacgaggactacttcaccggcggcatgggcgctgaggcg
attcagaccctgatccgcaacttcgacctggacgccgagtctgaggagctgcgccacatc
atcgccgagggcaagggccagaagaaggtccgcgctctcaagcgcctgaaggttgtcgcc
gcgttccagcgctccggcaacgacccggccggcatgatcctcgacgcgatcccggtgatc
ccgccggagctgcgcccgatggttcagcttgacggtggccgttttgccacctccgacctg
aacgacctgtaccgccgcgttatcaaccgcaacaaccgtctcaagcgcatgattgacctc
ggtgcccccgagatcatcgtgaacaacgagaagcgcatgctgcaggagtccgtcgacgca
ctgttcgacaacggccgccgcggccgtccggtcactggcccgggcaaccgtccgctgaag
tccctgtccgacctgctcaagggtaagcagggccgcttccgccagaacctgctgggtaag
cgcgtggactactccggtcgttccgtgattatcgtgggtccgcagctgaagatgcacgag
tgcggtctgccgaagctgatggctctcgagctgttcaagccgttcgtgatgaagcgcctg
gtggacaacgactacgcgcagaacatcaagtccgcgaagcgcatggtggagcgccagcgt
cctgaggtgtgggacgttctggaagaggctattgctgagcacccggtgctgctcaaccgc
gcaccgacgctgcaccgcctgggtattcaagccttcgagccggtcctggtggagggcaag
gctatccagctgcacccgctggcgtgtgaggccttcaacgccgacttcgacggcgaccag
atggctgtccaccttccgctgtccgcggaggcacaggcagaggcacgcgtcctcatgctg
tcctccaacaacatcctgtctccggcatccggtaagccgctggctatgccgcgcctggat
atggtgaccggcctgtacttcctcaccatggtcaagggcgagggtgagatcggtggcgag
ggcgcgtacgctccggccgacgagaacggcccggcacgcggtgtgtactcctctcaccgt
gaggccatcatggcctacgaccgcggcgttctgggcctgcaggccccgatcaaggtccgc
atcgatcacctgcgcccgaccgcagagattgaggcggagcagttccccgacggctgggag
aagggtcagtcctggatggctgacaccactttgggccgcatcatgttcaacgagatgctc
cccttcaacttcccgtaccaggaaggcgcgatggtgcgtaagggcggcaaggacaaggtg
ctgctcggtgacatcatccaggcgatggtggagaagtacccgatgatcaccgtcgcgcag
acgatggacaagctcaaggacgccggtttctactgggcgacccgctcgggcatcaccatc
actatgtctgacgttctggttctgccgaacaagaccgagatcctcgacgagtacgagcgt
gaggcggaggccattgagcgcaagtacttcgagaagggtgcgctgaccgagaaggaccgc
tacgaccgcctggttgagctgtggcaggacgccaccgacaaggtcggtaaggctgtcgag
gctctgtacccggacgacaacccgattccgatgatcgtgaagtccggtgctgccggtaac
atgcgccagatctggacgctggccggcatgaagggcatggtcgtgaactcccgcggtgag
tacatcacccgtccgatcaagacctccttccgcgagggcttgagcgtgatggagtacttc
aacaactcccacggttcccgtaagggcctggctgataccgctctgcgtacagctgactcc
ggttacctcacccgtcgtcttgttgacgtcgctcaggacgtcatcgtccgcgaagaggac
tgtggcacccaccagggtgtcaaggtgccggtcgctgaggctgcaggaacgggccgcttc
aaccgccacgacctggtcgagacctctgtctccggccgcgtgctggcgtccgacgcgacc
gacgctgacggcaacgtccttctcgaggcaggctcggacctgtccgaggagcgtatcgac
gctctcgtcgacgccggcatcgagtccgtcaaggtccgctccgtgctgacctgccagacc
ccgaccggtgtctgcgcgaagtgctacggcaagtccatggcgacgggcaagctcgtcgac
atcggcgaggccgtcggcatcgtcgccgcccagtccattggtgagccgggtacccagctg
accatgcgtaccttccaccagggtggtgtcggtggcgacattaccggtggtctgccgcgt
gtccaggagctgttcgaggcccgcgttccgaagaaccgcgccccgatcgcctctgtcgcc
ggcgagatctcgctggaggacgagggcaacttctggaccctgaccatccacccggaggac
ggctccgacgacgtggtctacgagaagctgtccaagcgccagggcctggcccaggtgcgc
cgcccgatggagtccaacccggaggccatgatcgagcgttcgcttcgcgacggcgacacg
gtcaaggtcggcgaccgcctcctgcgcggtgccgctgatccgcacgacgtgcttgaggtg
ctgggacgccgcggcgtcgaaaagcacctcatcgacgaggtgcaggctgtgtaccgcaca
cagggtgtgtcgatccacgacaagcacatcgagatcatcatccgccagatgctgcgccgc
ggcaccgtcatcgacgcaggctccaccgagttcctcccgggcaccctggtggacctgtcc
gaggcacgccagatcaacggtcaggctgtcgccgagggtggcgagccggcagagctgcgc
agcgagatcatgggtatcaccaaggcctcgctggccacggagtcctggctgtccgccgcc
tccttccaggagacgacgcgcgtgcttaccgacgccgccatcaacaagcgctccgataag
ctcatcggcctcaaggagaacgtgatcatcggtaagctgatcccggccggtacgggtatt
tcccgctaccgcaacatctccgtgaagccgaccgaggccgcgcgttccgccgcctactcg
atcccgaccttcggcgatgccatctacggcgacgagggttacggcgagttcaccggcgcg
tccgtgccgctcgacgagtacggcatgggcggctacgacagctaccagtag
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