Corynebacterium genitalium: KBP53_02890
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Entry
KBP53_02890 CDS
T10365
Name
(GenBank) DEAD/DEAH box helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cgp Corynebacterium genitalium
Pathway
cgp03420
Nucleotide excision repair
cgp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cgp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KBP53_02890
03430 Mismatch repair
KBP53_02890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgp03400
]
KBP53_02890
Enzymes [BR:
cgp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KBP53_02890
DNA repair and recombination proteins [BR:
cgp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KBP53_02890
MMR (mismatch excision repair)
Other MMR factors
KBP53_02890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
NNH1
Motif
Other DBs
NCBI-ProteinID:
UUA90473
LinkDB
All DBs
Position
596885..600178
Genome browser
AA seq
1097 aa
AA seq
DB search
MQPVTLSRYLKEKFPPTDQQAAVIGADPGPLLVVAGAGAGKTETMAARVVWLVANGYVRP
EEVLGLTFTRKAAHELGRRIRTRLEKLAANEQLVRHLDPSGGLAETLEVIAPTVSTYDAF
AGDLIREYGLLVPVEPDARLITDAELHSIAWDVVSNHGGALLDGVDANPGVSTVVDTLLR
LVANMGNDLMPPSRVREEAEAFIDNVAALPRGRAKEQYAKEVRGWIDKQRLRAAYTDLAE
ELSRELRERGVVTFNEQMSVAAQLASNHPSVGESQRGRFRVVMLDEYQDTSHAQRVLLRS
LFGENRDDLARHPHPLTVTAVGDPMQAIYGWRGATAANLQAFVDDFPLADGASAPKAQLT
TSWRNPPEVLALANSVSSAVLGAPGPQRAVEPLNPNPASDPGNVEVGFYGPVDEEIAAVA
DMLAADFHEQLAEHGDVSSAVLVRKNKQSALIAEALEERGIPYEIVGLAGLLTVPEVADA
VAVAKMLVHPQDSAAALRILAGPACGLGLKDITALSRRAVNLAGGRAHDQDDSAVAGLGP
DADPRERLQAQLTDLIREAENAVGENERSVGLADAVADLGEPERYTEEGLARLQVLSSQL
RALRMRSLGKRLPDLFDDIVSIFGIRTEVLSRPSDTGTVHLDKFAETVASYPGADLEGFL
NYLELATEHEDGLAPGTVANTGDRVQILTAHKAKGLEWRTVAVAHADAATYGGTAETFLG
YVATVPDDSYTALAEADTRSDFQKLTNQYKKDKTAELAEESARLFYVAVTRAERRLLVTA
SGISPTRKKPVEPYSHFLPFRDMAEVLSWWDGTVTDELTDIREREGFWPHYSAEPAAVDA
AERVNAALKDLPQLTAGELYGLWERDVTALIEEHEATMSPSVPVIMPAMLTASDIVALRA
NPEQFARRARRPVPFKPNSYAKRGTAFHEWIEGFFGARPLLDDDELPGNTEPDVDATTLA
RLKASFEASHWAQRAPAHIEHPFEIDLGSASVRGRIDAVYRDAPTPEAPHGSWTIVDWKT
GAKPQATEMRAAKLQLAVYREAWKRIAGDGLPVNAVFFYVRTGEDFAPHDLPERGELEEL
LQTAAARGLESDIDMQH
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atgcaacccgtgacactgtcgcggtatctgaaggagaagttcccgccgaccgatcagcag
gcggcggtcatcggggcagaccccggcccgctcctcgttgtcgccggcgcgggcgcaggc
aagaccgaaacgatggcggcccgcgtcgtgtggctggtggccaacggctacgtccggccg
gaggaagtgctcggcctgacgttcacgcgaaaggccgcgcacgagctgggtaggcgcatt
cgtacccggttggagaagctcgccgcgaatgagcagctggtgcgccacttggaccccagc
ggcgggctcgcggagacgctcgaggtcatcgcgccgaccgtgtccacctatgacgcgttt
gccggcgacctcatccgcgaatacggcctgctcgtccccgtggagcctgacgcgcggctt
atcaccgatgccgagctgcattccatcgcctgggacgtagtgagcaatcacggtggcgct
ttgctcgacggtgtcgatgcgaaccccggtgtgagcaccgtcgtggacactctgctgcgg
ctcgtggccaacatgggcaacgacctcatgccgccgtcgcgggtgcgggaggaagcggag
gcgttcattgataacgtcgcagcccttccccgcggcagagcgaaagagcagtacgccaag
gaagtccgcggctggatagacaagcagcgtcttcgcgccgcctacaccgacctcgcggag
gagctcagccgcgagctgcgcgaacgcggagtggtcacgttcaacgagcaaatgtccgtc
gcggcgcaactggccagtaaccacccgtcggtcggggagagccaacgcggccgcttccgg
gtggtcatgttggatgaataccaggacacctcccacgcccagcgcgtgcttctgcgcagc
ttgttcggcgaaaaccgcgacgacctcgcgcggcacccgcacccgctgaccgtcaccgcc
gtcggtgacccgatgcaggcgatttacggctggcgcggagccactgccgctaatctgcag
gcgttcgtcgacgactttccgcttgccgacggtgcctccgccccgaaagcccagctcacc
acctcatggcgcaacccaccggaagtgctggcactggccaactcagtgtcgtcggccgtg
ctcggcgccccggggccgcagcgcgccgtcgaaccgctcaatccgaatccggcgtctgac
cccggtaacgtggaggtgggcttctacgggcctgtggacgaggaaatcgccgccgtcgct
gacatgctggccgcggacttccatgagcagttggcggagcacggtgatgtctcctcggct
gtgctggtgcgcaagaacaaacagtccgcactgattgctgaagctctggaggagcgcggc
atcccttatgagattgtcggtctggcaggtctcctgaccgtgccggaggtcgccgatgcg
gttgctgtagcgaaaatgcttgttcacccgcaggattctgccgctgctctgcgcatcctg
gctggccccgcatgcggattggggctgaaagacatcacggccttgtctcggcgagcagtg
aacctggccggcggccgggcgcacgaccaagacgacagcgctgtagcggggctggggcct
gatgcagatccgcgggaacggttgcaagcccagctcaccgacctgatccgcgaggctgag
aacgccgtcggtgagaacgagcgctccgttggcctcgccgacgcggtggcggacctcggt
gagccggagcgctacacggaggaaggtctggcgcgcctgcaggtgctgtcctcgcagctg
cgcgccctgcgcatgcgcagcttgggcaagcgcctgccggacctgttcgatgacatcgtc
tccatcttcggcatccgcaccgaggtgctctcccgcccctccgacaccggcactgtgcat
ctggacaaattcgctgaaacggtcgcgtcgtatccgggtgcggatctggaaggcttcctg
aactacctggagttggccaccgagcatgaggacggtctggcgcccggcactgtcgcgaac
accggcgaccgggtgcagatcctcaccgcgcacaaggcgaaaggcttggaatggcgcacc
gtcgctgtcgcccacgctgacgccgcaacgtacggcggaacggcggagaccttcctcggc
tacgtagcgacggtcccggacgactcctacaccgcactcgccgaagccgatacccgcagc
gacttccagaagctcaccaaccagtacaagaaggacaagaccgctgagcttgccgaagag
tccgctcggctcttctacgtcgcggtgacccgggcggagcggcgtcttttggtcacggcg
tccgggatctctccgacgcggaagaagccggtggagccctactcccacttcctgcccttc
cgggatatggcggaggtgttgtcctggtgggacggaacagtgacggatgagctgacggac
attcgcgaacgcgaaggcttctggccccactacagcgccgagcctgccgcagtggatgcc
gctgagcgcgtcaacgcggcccttaaggacctgccgcagctcaccgccggtgagctctac
gggctgtgggagcgcgatgtgacagcgctgatcgaggagcatgaggccaccatgagcccg
tcggtgccggtcatcatgcccgcaatgctcaccgcctccgacatcgtcgcgctgcgcgcc
aacccggagcagttcgcccgccgcgcgcgccgcccggtgccgttcaaaccgaactcttat
gccaagcgcggaacagcgttccacgaatggatcgaggggttcttcggtgcgcgcccgctt
ctcgacgacgacgagctgcccggcaacaccgaacccgacgtcgacgcgaccacactggca
cgcctcaaggcgtcctttgaggccagccactgggcgcagcgcgctccggcgcacatcgag
cacccctttgagatcgacttgggctcggcgagcgtgcgcggccgcattgacgctgtgtac
cgtgacgcgcccacaccagaggcgccgcacggcagctggaccatcgtcgactggaagacc
ggcgccaaaccccaggcgacggagatgcgggccgcgaaactgcagctggccgtctaccgg
gaggcgtggaaacgcatcgccggcgacgggctgccagtcaacgcagtgttcttctacgtc
cgcaccggggaagacttcgccccgcacgacctgccagaacgcggcgagctggaggagctg
ctgcaaaccgccgcggcaagaggtctagagtccgatatagacatgcagcattaa
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