Corynebacterium genitalium: KBP53_04645
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Entry
KBP53_04645 CDS
T10365
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cgp Corynebacterium genitalium
Pathway
cgp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cgp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KBP53_04645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgp03019
]
KBP53_04645
03009 Ribosome biogenesis [BR:
cgp03009
]
KBP53_04645
Enzymes [BR:
cgp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KBP53_04645
Messenger RNA biogenesis [BR:
cgp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KBP53_04645
Ribosome biogenesis [BR:
cgp03009
]
Prokaryotic type
rRNA helicases
KBP53_04645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
UvrA_inter
adh_short
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
UUA90496
LinkDB
All DBs
Position
947377..949404
Genome browser
AA seq
675 aa
AA seq
DB search
MNTDDFAAEDQADTAGEVAGTEADTQPDTHNTQTEENTETPAEAPAETSAENSEPNQDGE
NAETSETKPEGFNGLGLPAPVLDAIKRVGFESPSQIQAETIPLLMEGRDVVGLAQTGTGK
TAAFALPILARIDTSARYPQALILAPTRELALQVSDSFQSFADHLGGISVLPIYGGQAYG
IQLSGLRRGAQIIVGTPGRVIDHLEKGSLDISNLRFLVLDEADEMLNMGFQEDVERILED
TPEDKQVALFSATMPNAIRRISHDYLNDPEEVTVKAKTRTNTNITQRYLFTAHRNKLDAI
TRVLEVTEFDAMIVFVRTKQETEEIAEKLRARGFSAAAINGDIAQQQRERTVDMLRDGRL
DILVATDVAARGLDVERISHVLNYDIPNDTESYVHRIGRTGRAGRTGEALLFVTPRERRM
LRSIEKVTGAKIEEMDLPTVDEVNVSRMNKFADSITESLENDQMELFRGLVRSYSVDHDV
PMEDIAAALAAQQQGDEFLMKEPPKDKRDRRERERFDREDRRDRDRGDRGRGRDRGNRGG
KGRFHNDDVNFDTYRLDVGKRQNVRPGAIVGALANEGGLTNRDFGRITIGGDFTLVELPK
NMDKSVLDRLSDTRISGQLINIQRDTGAPPRDRGDRGGRGGRGGYRKRDDDRDRGRGRGG
HGGRGGGRGKRDWRD
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgaatacagatgacttcgcggccgaggaccaggccgacaccgccggcgaggttgccggc
acagaggctgatacgcagcctgacacccacaacacccagactgaagagaacaccgaaact
ccggctgaggctccggccgagacctctgctgaaaactccgagccgaaccaggacggcgag
aacgccgagacttccgagaccaagcccgagggcttcaacggccttgggctcccagcgccg
gtgctcgacgcgatcaagcgcgtcggcttcgaatcgccgtcgcagatccaggctgagacg
atcccgctgttgatggaaggccgcgatgttgtcggcctagcccagaccggtaccggtaag
acggcggcatttgcgctgccgattctggcgcgcatcgatacgtcggcacgctacccgcag
gcccttatcctcgcgccgacgcgcgagctggcgctgcaggtgtctgactccttccagtcc
ttcgcggaccacctcggtggcatctccgttctgccgatctacggcggccaggcttacggc
attcagctgtcgggcctgcgccggggcgcgcagatcatcgtcggcacgccaggccgcgtc
atcgaccacctggagaagggctcgctggacatctccaacctgcgcttcctcgtgctggat
gaggcagacgagatgctcaacatgggcttccaggaagacgtggagcgcattctggaggac
acccccgaagacaagcaggtcgcgctgttctccgcgacgatgccgaacgcgatccgccgc
atctcgcatgactacttgaacgaccctgaagaggtcacagtcaaggcgaagacccgcacg
aacaccaacatcacccagcgctacctgttcaccgcgcaccgcaacaagctcgacgccatc
acgcgcgtgcttgaggtgactgagttcgacgcgatgatcgtcttcgtccgcaccaagcag
gagaccgaggagatcgccgagaagctgcgagcacgcgggttctccgcggctgcgatcaac
ggcgacatcgctcagcaacagcgcgagcgtaccgtcgacatgcttcgcgacgggcgcttg
gacatcctcgtggccaccgacgtcgccgcgcgcggcctggatgtggagcgaatctcccac
gtgctcaactacgacatcccgaacgacacggagagctacgtccaccgcatcggccgcacc
ggccgtgctggacgcaccggtgaagcgctgctgttcgttaccccgcgtgagcgccgcatg
ctgcgttccattgagaaggtcaccggcgcgaagatcgaggagatggacctgcccactgtg
gatgaggtcaatgtctcccgcatgaacaagttcgccgactccattaccgagtccctcgaa
aacgaccaaatggaactcttccgcggactcgtgcgcagctactcggtcgaccacgacgtg
ccaatggaggacatcgccgccgcgcttgccgcacagcagcagggtgatgagttcctgatg
aaggagcccccgaaggacaagcgcgaccgccgcgagcgcgagcgcttcgaccgtgaggat
cgtcgcgaccgtgaccgcggggatcgtggccgcggccgggaccgtggcaaccgcgggggc
aagggccggttccacaacgacgacgtcaactttgacacctaccgcctagacgtgggcaag
cgtcagaatgttcgcccgggtgccatcgtcggcgcgctggcgaatgagggcggtctgacc
aaccgcgacttcggccgcatcaccattggcggcgacttcaccctcgtcgagctgccgaag
aacatggataagagcgtgctcgaccgcctgtccgacacccgcatctccggccagctgatc
aacattcagcgcgacaccggtgccccgccgcgcgaccgtggtgacaggggcggccgtggt
ggacgcggcggctaccgcaagcgtgacgacgaccgcgaccgcggccgggggcgcggcggc
cacggtggccgtggcggtggccggggcaagcgcgactggcgcgactaa
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