Corynebacterium genitalium: KBP53_04825
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Entry
KBP53_04825 CDS
T10365
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
cgp Corynebacterium genitalium
Pathway
cgp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cgp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KBP53_04825 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgp03021
]
KBP53_04825 (rho)
03019 Messenger RNA biogenesis [BR:
cgp03019
]
KBP53_04825 (rho)
Transcription machinery [BR:
cgp03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
KBP53_04825 (rho)
Messenger RNA biogenesis [BR:
cgp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
KBP53_04825 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
AAA_25
Spore_III_AA
NACHT
Motif
Other DBs
NCBI-ProteinID:
UUA90275
LinkDB
All DBs
Position
986826..988667
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AA seq
613 aa
AA seq
DB search
MTDTDNAAGQDRQDLASLKLPELRKIAADKGLRGTSALRKGELIEAITTGTVPQRAKQRA
SEQAAAEASGEQPTGRNEQNEQNNPEQGEKSGSEKSGSDNDGADSDEQRYESRSAARRAR
RNRAKHEHRAEQRGDRNDQQDEQQSDDHGQRDNRDNGDNRDNRDNRDNRDNQGGNNRQNN
NRDNNRDGEGGGRRGRRNRRNRRNRDGNNNQGGGNNNQDFDPEDLQEIAGIVDIVDNNAA
FVRTTGYRASQADVFINNNLVRRCGLRSGDAVIGQVRANGQGHTHGSGRNRQRYNQLVRV
DTVNGMKVDDAKQRAEFHKLTPLYPNQRLRLETEPNILTTRVIDLVMPIGKGQRALIVSP
PKAGKTTILQNIANAIAHNNPECYLMVVLVDERPEEVTDMQRSVKGEVIASTFDRPPSEH
TAVAELAIERAKRLVEMGQDVVVLLDSITRLGRAYNNSSPASGRILSGGVDSNALYPPKR
FLGAARNIEDGGSLTIIATAMVETGSAGDTVIFEEFKGTGNAELKLDRKIAERRVFPAVD
VNPSGTRKDELLLAPEEARVMHKLRRILSALDPQAAIDLMIKQLKKTKNNGEFLVGVAQS
APMAADTETEEYQ
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgatacggacaacgcagcgggccaggaccgccaagaccttgcttcgctgaagctg
cctgagctacgcaagatcgctgctgacaaaggccttcgggggacctccgccctgcgcaag
ggcgaactgattgaagccatcaccaccggcaccgtgccgcagcgcgccaagcagcgcgct
tccgagcaggcagccgcagaggcatccggtgagcagccgaccgggcggaacgagcagaac
gagcagaacaacccggagcagggggagaagtctggctccgaaaagtctggttctgacaac
gatggcgcagattccgatgagcagcgctacgaatcccgctccgcagcgcgccgtgcacgc
cgcaaccgcgccaagcacgagcaccgtgccgagcagcgcggcgaccgcaacgaccagcag
gacgagcagcagtccgacgatcacggccagcgtgacaaccgcgacaacggtgataaccgc
gacaaccgcgacaatcgtgacaaccgtgacaatcagggcggcaacaaccgccagaacaat
aaccgcgataacaaccgcgacggtgagggtggcggccgccggggccgccgcaaccgccgg
aaccgccgaaaccgcgacggtaacaacaaccagggcggcggcaacaacaaccaggacttc
gatccggaggatctgcaggagatcgcgggtatcgtcgacatcgtcgacaacaatgccgcg
tttgtccgcaccacgggttaccgcgctagccaggctgatgtcttcatcaacaacaacttg
gtccgccgctgcggcctgcgctcgggcgacgctgtgatcggtcaggtccgggctaacggc
caaggccacacgcacggttctggccgtaaccgtcagcgctacaaccagctggtgcgcgtg
gacacggtcaacgggatgaaagtggacgacgcgaagcagcgtgctgagttccacaagctc
accccgctgtacccgaaccagcgtctgcgccttgagacggagccgaatatcctgaccacc
cgcgtgatcgacctggtcatgccgattggtaaggggcagcgcgccttgatcgtgtccccg
ccgaaggccggtaagacgacgattctgcagaacatcgcgaacgcgatcgcgcacaacaac
cctgagtgctacctcatggtcgtgcttgtggatgagcgcccggaggaagtcacggacatg
caacgctccgtcaagggcgaggtcatcgcatcgaccttcgaccgtccgccaagcgagcac
accgctgtcgccgagctggccatcgagcgtgcaaagcgcctggtggagatgggccaggac
gttgtggtcctgctggattccatcacccgcctgggtcgcgcgtacaacaactcgtcgccg
gcgtcgggccgcatcctttctggcggtgtggactccaacgcgctttacccgccgaagcga
ttcctgggtgcagcgcgcaacatcgaggacggcggttcgctgaccatcatcgctaccgcc
atggtggagaccgggtccgctggtgacaccgtgatcttcgaggagttcaagggcaccggc
aacgctgagctcaagctcgaccgcaagatcgccgagcgccgcgtgttcccagcggtcgat
gtcaacccgtccggcacccgcaaggacgagctgctgctcgcaccggaggaagcgcgcgtc
atgcacaagctgcgccgcattctttctgcgctggacccgcaagcggcgatcgaccttatg
atcaagcagctgaagaagacgaagaacaacggcgagttcctcgtcggcgtggcgcagtcc
gcgccgatggccgccgacacggaaaccgaggagtaccagtaa
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