Corynebacterium genitalium: KBP53_05560
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Entry
KBP53_05560 CDS
T10365
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
cgp Corynebacterium genitalium
Pathway
cgp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cgp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KBP53_05560 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgp03400
]
KBP53_05560 (uvrA)
DNA repair and recombination proteins [BR:
cgp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KBP53_05560 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KBP53_05560 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
RsgA_GTPase
nSTAND1
AAA_16
AAA_21
AAA_33
nSTAND3
APS_kinase
AAA_25
AAA_22
NACHT
AAA_18
NB-ARC
AAA_14
DnaJ_CXXCXGXG
ATPase
MMR_HSR1
SLFN-g3_helicase
NTPase_1
Viral_helicase1
MeaB
cobW
DUF87
Septin
Dynamin_N
Motif
Other DBs
NCBI-ProteinID:
UUA90414
LinkDB
All DBs
Position
1141304..1144159
Genome browser
AA seq
951 aa
AA seq
DB search
MADKLTVRGAREHNLKGIDVELPRDKMVVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSS
YARMFLGQMDKPDVDYIDGLSPAVSIDQKSTNRNPRSTVGTITEIYDYLRLLYSRAGTPH
CPVCDAVIDRQTPQQIVDRVMENPERTKFQVLAPIVRKRKGEFVDLFSDLSAQGYARINV
DGETYQLSDPPKLEKQVKHNIDVVVDRLTVKESQKQRLTDSVETALKLADGLVGFDFVDR
DEDDPNRVEIFSEKMACPNGHTLNVEEYEPRAFSFNSPFGACPACDGLGTRSEIDPDLVI
PDPDAPAVDAFQPWNSSPNKGYFTKLIVALGKAEGFDPYEPLSSLSKKHRTALIDGTSTK
VSVRYKNRYGRQRNFTAAFEGVKGYLNRKIEQSESEHAKEKYLAYTRDVACPTCNGARLK
PEILAVRLDSKTHGEKSIAGLTELSVEDASQYLDNLVLGYREEMIAGAVLREIQARLHFL
LDVGLNYLTLSRSAGTLSGGEAQRIRLATQIGSGLAGVLYVLDEPSIGLHQRDNQRLIAT
LQKLRDLGNTLVVVEHDEDTIRAADWLIDVGPLAGEYGGKVVYQGEPKGIEKVEESLTGA
YISGRKEITVPDARRPLDKERKLRVVGARENNLDNVSVDIPLGMLVAVTGVSGSGKSTLV
NQILAKTLQNRLNGARQVPGRVKKVDGLEHLDKLVQVDQSPIGRTPRSNPATYTGVFDKI
RNLFAETQEAKVRGYKAGRFSFNVKGGRCEACRGDGTIKIEMNFLPDVYVPCEVCGGARY
NRETLEVRYKGKNIAEVLDMPISEATDFFEPITSIHRYLQTLCDVGLGYVRLGQSATTLS
GGEAQRVKLAAELQKRSNGRTIYILDEPTTGLHFEDIRKLMLVLNGLVDKGNTVLVIEHN
LDVIKCADWIIDMGPEGGSGGGTVVAQGTPEKVSKVKGSFTGEFLADVLTT
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
gtggccgacaaactcactgtgcgcggagcgcgcgaacacaacctcaaaggcatcgacgtg
gagctgccacgcgacaagatggtcgtgttcacgggcttgtcgggctcgggcaagtcctcg
ctggcgttcgacacgatcttcgcggaagggcagcgccgctacgtcgaatcgctcagttct
tacgcgcgcatgttcctcggccaaatggacaagccggatgtcgactatatcgacggtctg
tcgccggctgtgtccattgaccagaagtcgaccaaccgcaatccgcgctcgacggtgggc
acgatcacggagatctacgactatctccgtctgctgtactcgcgcgccggcaccccgcac
tgtccggtgtgcgacgccgtcatcgaccggcaaactccgcagcagattgtggaccgcgtc
atggagaacccggagcgcacgaagttccaggtgctcgcgcccatcgtgcgcaagcgcaag
ggcgagtttgtcgacctgttctctgacctgtccgcacagggctatgcccgcatcaacgtc
gacggtgagacctaccagctgtcggatccgccgaagctggaaaagcaggtcaagcacaac
atagacgtcgtcgtcgaccgtctcactgtgaaagaaagccagaagcagcggctcacggac
tccgtcgagacagcattgaagcttgccgacggtctcgtcgggttcgatttcgtcgaccgc
gacgaggacgacccgaaccgcgtggaaatcttctccgaaaagatggcctgcccgaacggg
cacacgctcaacgtggaggagtacgagccgcgcgcgttctccttcaactctcccttcggc
gcatgccccgcgtgcgacggcctgggcacccgcagcgagatcgatccggacctggtgatt
ccggacccagacgcaccggccgtcgacgcgttccagccgtggaactcctcgccgaacaag
ggctacttcaccaagctcatcgtcgcgctcggcaaagcggaggggtttgatccgtacgag
ccgttgtcgtcgttaagcaaaaagcaccgcacggcgctgatcgacggcacctccacgaag
gtgtccgtccgctacaagaaccgctacggccgccaacgcaacttcaccgccgcgttcgaa
ggcgtgaagggctacttgaacaggaagatcgagcagtccgagtcggagcacgcgaaggag
aagtacctcgcctacacccgcgatgtcgcctgcccgacgtgcaacggtgcgcgcctcaag
cccgagatcttggcggttcgcctcgactcgaagacgcacggggagaagtccattgcgggg
ctgaccgagctgtccgtcgaagacgcgtcccaatacctagacaacctcgtgctcggatac
cgcgaggaaatgatcgccggggctgtgctgcgcgagatccaggcgcgcctgcacttcctg
ctcgacgtcggactgaactacctgacgctgtcgcgctctgcgggaacgctctccggcggt
gaggcacagcgcatccgtctggctactcagatcggttcgggtctggctggtgtgctttac
gtgctcgacgagccgtcgattggcctgcaccagcgcgacaaccagcgcctcatcgcgacg
ctgcagaaattgcgcgacttgggtaacaccctggttgtggtcgagcacgacgaagacacc
attcgggccgccgactggcttatcgacgtcggccccctcgccggtgaatacggcggcaaa
gttgtgtaccagggcgagccgaagggcattgagaaggtcgaggagtccctgaccggtgcc
tatatctccggccgcaaggagatcacggttccggatgcacgccgcccgctggacaaggag
cggaagctgcgcgtcgtcggtgcccgcgagaacaacttggacaacgtgtctgtcgacatt
ccgctgggcatgctcgtcgcggtgacgggtgtgtccggctccggtaagtccacgctggtc
aaccagatcttggcgaagaccctgcagaaccgcctcaacggtgcgcgccaggtgcccgga
cgtgtgaagaaggtcgatggcctcgagcacctggacaagctcgtgcaggtggaccagtcg
ccgatcggccgcacgccgcgctcgaacccggcgacgtacaccggtgtcttcgataaaatc
cgcaacctgttcgcggagacacaagaagcgaaggtgcgcggttacaaggcggggcgtttc
tccttcaatgtcaagggtggacgctgcgaggcttgccgcggtgacggcacgatcaagatt
gagatgaacttcctgccggacgtctacgtcccctgcgaagtgtgcggcggcgcgcgctac
aaccgcgaaacgctcgaggtccgctacaagggcaagaacatcgccgaagttctggacatg
ccgatcagtgaggcgaccgatttcttcgagcccatcacatcgatccaccgctacttgcag
acgctgtgcgatgtcggccttggctacgttcgactgggtcagtccgctacgactctttcc
ggtggcgaggcccagcgtgtgaaactcgccgcggagctgcagaagcgctccaacggccgg
acgatctacatcctggatgagcccacaacgggcctgcacttcgaggacatccgcaagctc
atgctcgtgctcaacggcctggtggacaagggcaacaccgtcttggtgattgagcacaac
cttgacgtgatcaaatgcgctgactggatcatcgacatgggtccggagggcggctccggc
ggcggaaccgttgttgcgcaaggcacgccggagaaggtgtccaaggtgaaggggtccttc
acgggcgagttcctcgcggatgtgctgacgacgtag
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integrated database retrieval system
