Corynebacterium genitalium: KBP53_06900
Help
Entry
KBP53_06900 CDS
T10365
Symbol
hrpA
Name
(GenBank) ATP-dependent RNA helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
cgp Corynebacterium genitalium
Brite
Enzymes [BR:
cgp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
KBP53_06900 (hrpA)
Messenger RNA biogenesis [BR:
cgp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
KBP53_06900 (hrpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
UUA88652
LinkDB
All DBs
Position
1411820..1415761
Genome browser
AA seq
1313 aa
AA seq
DB search
MSTPESSPPITRDALKARLDELPIAQVRRFDRRLKKAKAPNALAAIHTDLEEEVAKVAAI
DALVPQITYPEQLPVSARREDIKNLIRDNQVVVIAGETGSGKTTQIPKMLLELGRGRRGL
IGHTQPRRIAARTVAERIADELGQDIGRSVGYAIRFDDRVSATTAVKLMTDGILLAEMQR
DRYLNAYDTIIIDEAHERSLNIDFLLGYLKRLLPYRPDLKIIITSATIDPESFAEHFADS
DGNPAPIIEVSGRTYPVEIRYRPLETEVPTKDGGTKVVDTDMLDGLIEALKELMAEGDGD
ILCFFASERDIRDAMELIEKQRWRGVEVTPLFGRLSNAEQHRVFSPHSGRRIVLATNIAE
TSLTVPGIHYVVDTGLARISRYSTRTKVQRLPIEEISQASANQRSGRSGRIADGIAIRLY
SEDNFHARPEFTDPEILRTNLASVILQMTNLRLGDIAEFPFVQPPDKKAVRDGLMLLHEL
GAITDKEDQDMPVLTGIGRDIARIPVDPRMARMLVEAHRLGVLDDVTVIVASMTIQDVRE
RPLEFQAQADQAHARFKDKTSDFLAALNLWDYLKDSRNELSGNAFRKRMKKEYLHYMRIR
EWFDLVRQLREAERQLGWARTATATDDHDDSRDRDPKSIHQALLTGLLSNIGARDGTSKE
FKGARGTRFMIFPGSVLAKKPPEFVMAAELVETSRLWARDVAAIDPAWVEKVAGGLLKHN
YSEPIWSIKRAAPMVHQKSMLYGVTVVADRLVPYHRVDMDAARTMFIRHALIDGEWNAHH
AFLKHNAKLLEEAAKVEEKVRRRGLVVDEEALFDFYDERLPDNIGTGRHFDAWWKKKKHE
DAAFLDFDPSALIDDSDADTSEDSFPDKIRQGSIDYDLQYKFEPGDPFDGVTVLVPVPLL
AGLEEREFDWLVPGLREELVTELIRSLPKALRKTVVPAPEFAARALDKLVPYESPLNEQL
AEVLRSLGGHGINASDFRPEALPPHLKITFASIDRKGKITDHDTSLAALKKRRAGQITSS
VAKATKKAESDSVTKWTEDTLGDVPETVTTKIEGNNVDAFPALEATNDGVRVKVFPTKAA
ADQSMVTATLAMLMRQIDVSVSQMVKGLPLRQRVAVDKYPHGGAAGLVEDARVAAIRDLM
FAHGGPVRTPAEFDALLNKVKPEVAGMVRRTVVGIAGGVVEYINTAAELQNWDGPAIDDI
RQQMNFLLPKNAITVHGMENLQHLPRYMSAIQIRLEEMNRDPDRDADRQSVVDDVKKYLD
AKLARLPQAARKSRAVKDILWRIQELRVSLFAQRLGTAKPVSPRRIEKMVDKL
NT seq
3942 nt
NT seq
+upstream
nt +downstream
nt
atgagcacccccgagtcttccccgcccatcacccgcgacgccctcaaagcgcgtctcgac
gagctgccgattgcccaagtccgccgctttgacaggcgcctgaagaaggcgaaggctccg
aacgctttagccgcgatccacaccgacttagaagaagaagttgcgaaggtcgccgcgatt
gacgctctggtcccgcagatcacctacccggagcagcttcctgtctccgcccgacgcgag
gacatcaagaacctcatcagggacaaccaagtcgtcgtcattgcaggtgaaacgggatct
ggtaaaactacccagatcccgaagatgctgcttgaactgggccgtggccggcgtgggctg
atcggccacacccaaccgcggcgaatcgctgcgcgcactgtcgctgagcgcatcgccgac
gagctcggccaggacattgggcgctccgtcggctacgccatccgcttcgatgaccgtgtg
tctgccacgaccgcggtcaagctcatgacggacggcatcctgctcgccgagatgcagcgg
gaccgctacctgaacgcctacgacacgatcatcatcgatgaggcccacgagcgctccctc
aacatcgatttcttgttgggctacctcaagcggcttttgccgtaccggccggacctgaaa
atcatcattacctccgccacgatcgacccagagtcgttcgcggagcacttcgccgacagt
gacggtaacccggcgcccatcattgaagtctcggggcgcacctacccagtggagatccgc
taccgtccgcttgagacggaggtgcccacgaaagacggcggcacgaaggtcgtcgacaca
gacatgctcgacgggctgattgaagccttgaaggagctcatggcggaaggtgacggcgac
atcctgtgcttcttcgcctccgagcgtgacatccgtgacgcaatggagctcattgaaaag
cagcgctggcgcggtgtcgaggtcactcccctgttcggccgactctccaacgccgaacag
caccgggtattctccccgcactccgggcgccgcatcgtgctagccaccaacatcgcggag
acgtcactgactgtccccggcatccactacgtggtggacaccggcctggcgcgcatctcc
cgctattccacgcgcaccaaggtgcagcgcctccccatcgaagagatctcgcaagccagc
gccaaccagcgctcgggccgctccggccgcatcgcggacggtatcgcgatccgcctttat
tcagaggacaatttccacgcccgccccgaattcaccgaccccgagattctgcgcaccaac
ctggccagcgtcatcctccagatgacgaacctgcgcttgggcgacatcgcggagttcccg
ttcgtccagccaccggacaagaaggctgtgcgcgacggcctcatgctcttgcacgagctc
ggcgccatcaccgataaggaagaccaagacatgccggtgctcacaggcatcggccgcgac
atcgcgcgcattcctgtcgacccgcggatggcccgcatgctggtggaggcacaccgcctc
ggtgtactggacgatgtcactgtcattgtcgccagcatgaccatccaggatgtccgcgaa
cgtccgttggagttccaggcgcaagccgaccaggcccacgcgcgtttcaaggacaagacc
tccgactttctcgctgcgctgaatttgtgggattacctcaaagactcccggaatgaactg
tccggcaacgccttccgcaagcgcatgaagaaggagtacctccactacatgcgcatccgc
gagtggttcgaccttgtgcgccagctccgtgaggcggagaggcagctcggctgggcccgc
accgccaccgcaacggacgatcacgatgactcgcgggaccgcgaccccaagtccatccac
caggccttgctcaccggcctgttgtccaatatcggtgcccgcgacggcacttcgaaggag
ttcaagggagcacgcggcacacgcttcatgatcttccccggttcggtgctggcgaagaag
ccgccggagttcgtgatggctgccgaactcgtcgaaacgtctcgtctgtgggcgcgtgac
gtcgccgctatcgatcccgcctgggtggagaaagtcgccggcggcctgctcaagcacaac
tattccgagccgatctggtccatcaagcgcgccgcgcccatggtgcatcaaaagtccatg
ctctacggagtcacggttgtcgctgatcgcctggtgccgtaccaccgcgtggacatggat
gctgcgcgcaccatgttcatcaggcacgcgcttatcgacggcgaatggaacgcccaccac
gcctttctcaaacacaacgccaagctcctcgaagaggccgccaaagtcgaggagaaggtg
cgccgccgcggtctcgttgtcgacgaggaggcgttgttcgacttttacgacgaacgcctg
ccggacaacattgggaccggccgccacttcgacgcatggtggaagaagaaaaagcatgag
gacgccgcattcctcgacttcgacccgagcgcacttatcgacgattccgacgctgacacc
agcgaagactccttccccgacaagatccgccagggaagcattgactacgacctgcaatac
aagttcgaaccgggcgacccctttgacggcgtcaccgtccttgtccctgttcccctgtta
gcgggtctggaggagcgcgaattcgactggctcgtgcccggtttgcgcgaagaactagtc
acagagctcatccgctccctaccaaaggcgttgcgcaagacagtcgttcctgcaccagag
tttgccgcgcgcgccctagacaagctcgttccttacgaatctccgttgaacgagcagctc
gccgaggtgttgcgctccctcggagggcacggcattaacgcatccgatttccggcccgaa
gcgttgccgcctcacctgaagatcacctttgcctccatcgaccgtaaagggaagatcacc
gaccacgacacgtcgctggccgcgctgaagaagcgccgcgccggccaaatcacctcgtct
gtagcaaaggcgaccaagaaggctgaatccgactcagttacgaagtggacggaagacacc
cttggtgatgtgccggaaactgtgacaacaaagatcgaaggcaacaacgtcgatgctttc
cccgccttggaggcgaccaatgacggcgtacgtgtgaaggtgttcccgacaaaggccgct
gctgatcaatccatggtgacggcgacgttggcaatgctcatgcgccaaatcgacgtctcg
gtctcccagatggtgaaaggcctgccgttgcggcagcgtgtggccgtcgataagtatccg
cacggtggtgccgctgggctggtcgaagatgcgcgcgtcgccgcgatccgcgatctcatg
ttcgcccacggtggaccagtgcgtacacctgcagaattcgacgcgctactgaacaaggtc
aagcccgaggtggccggcatggttcggcgcacggtcgtcggcatcgccggtggtgtggtc
gaatacatcaacactgcggcggaacttcagaactgggatggcccagctatcgacgacatc
cgccagcagatgaacttccttctacccaagaacgccatcacagtgcacgggatggagaat
cttcaacaccttccgcggtacatgtcggcgatccagattcggctcgaggagatgaaccgc
gaccccgaccgcgatgcagaccgccaatcggtagtcgacgacgtgaagaagtacctcgat
gccaaactggcccggctaccgcaggcggcccgtaaatcccgggcagtcaaggacattctg
tggcggatccaagagctgcgtgtgagcttattcgctcagcgactcggtacagcgaaaccg
gtaagcccgaggcggatcgagaagatggtggataagctctag
DBGET
integrated database retrieval system
