KEGG   Corynebacterium glutamicum AR1: CGLAR1_04650
Entry
CGLAR1_04650      CDS       T03362                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
cgq  Corynebacterium glutamicum AR1
Brite
KEGG Orthology (KO) [BR:cgq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cgq03400]
    CGLAR1_04650
Enzymes [BR:cgq01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CGLAR1_04650
    5.6.2.6  RNA 3'-5' helicase
     CGLAR1_04650
DNA repair and recombination proteins [BR:cgq03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    CGLAR1_04650
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD WH4_Lhr WH3_Lhr Helicase_C WH2_Lhr ResIII AAA_25 DUF6406 PhoH Thiolase_C
Other DBs
NCBI-ProteinID: AIK84562
LinkDB
Position
958502..963064
AA seq 1520 aa
MAKSILSRFRPQVAEWFRDVFASPTPVQEGTWEAVSKGKNALVVAPTGSGKTLAAFLWAL
DSLTEQTGQQVLDTGTPVPVRGGKVKVLYISPLKALGVDVENNLRAPLTGIARTASRMGL
DVPNITVAVRSGDTPSAERARQVRKPPDILITTPESAYLMLTSKAGATLSDVDVVIIDEI
HAMAGTKRGVHLALTLERLEKLVGRPVQRVGLSATVRPLETVAGFLGGGRPVEIVAPPAE
KKWDLTVTVPVEDMSDLPVQEPGSTIGELVMDDPLGITGESALPTQGSIWPHIEQQVYNQ
VMSAKSTIVFVNSRRSAERLTSRLNEIWAMEHDPESLSPQLRRDPAQIMSSADVAGKAPQ
VIARAHHGSVSKDERATTETMLKEGRLRAVISTSSLELGIDMGAVDLVIQVESPPSVASG
LQRVGRAGHTVGATSIGSFYPKHRSDLVQTAVTVQRMKEGLIEEIHVPKNALDVLAQQTV
AAVSIKDVQVDEWYETIRKAYPYRDLAREVFDSVIDLVSGVYPSTDFAELKPRVVYDRVS
GVLEGRPGSQRVAVTSGGTIPDRGMFGVFLVGDGPRRVGELDEEMVYESRVGDVFTLGAS
SWRIEEITRDQVLVTPAPGHTGRLPFWTGDAAGRPAELGKALGAFRRTTLADPSSSGLEG
WAHDNLIAFLQEQEESTGVLPDEKTLVLERFKDELGDWRIVLHTPYGRGVNAAWALAVGA
KIAEETGMDAQAVAGDDGIVLRLPEGDEDPSAALFMFEAEEIETLVTEQVGNSALFASRF
RECAARALLLPRRNPGKRAPLWQQRQRAAQLLDVARKYPSFPIILETVRECLQDVYDLPA
LKNLIEDLQLRKVRIAEVTTQQPSPFASALLFNYTGAFMYEGDSPLAEKRAAALALDPAL
LAKLLGEVELRQLLDPDIIAEVHQQLRRQGDRAARNNEELADSLRILGPIPLDELGEHIT
FENPDLEDRAMTVRINGREHLAQVLDAPLLRDALGVPVPPGVPAQVETITDALEQLVNRW
VRTRGPFTANDLAEAFGLGIATAITALQSAPVIEGRYRQGVDVQEYCATEVLSIIRRRSL
AAARKQTRPVSQSAFARFLLDWQQIAPVGASPELRGVDGTYTVIEQLAGVRLPASAWEDL
VLPRRVADYSPIHLDELTSNGEVLIVGAGQAGSRDPWISLLPVDYAAQLVGEASTSMSPL
QDAVLDQLRAGGAFLFSDILEENFGYTTAQLQEAMWGLVEAGLVSPDSFAPIRARLASGT
TAHRAKRRPARSRLRTRTSFASDVPPDMRGRWTLSVQPADATSRSVAHGEGWLDRYGVLT
RGSVVAEDIVGGFALAYKVLSGFEESGKAMRGYFIEGLGAAQFSTPAIIDRLRGHDDSPD
VEGWPSGATDPDVYLIAAADPANPYGAALPWPEQGPSRAAGAMVVLCDGLLLAHLTRGGR
TLTVFSDNIPKIATALITYERLTVEKINGDNVFDSPLLEQFRKHGATITPKGMRFRPPVA
RETPSDTLPTRPFRGGFGRR
NT seq 4563 nt   +upstreamnt  +downstreamnt
atggctaaaagcattctttcccgattccgacctcaagtagcggagtggttccgggatgtc
tttgcatctccgacccctgttcaggagggaacgtgggaggcggtatctaaggggaagaat
gccctcgtggtggcgccgaccggtagtggtaaaaccttggctgcgtttttgtgggcgtta
gattccctcactgaacaaacaggtcaacaggttttagacacgggaacaccggtgcctgtt
cgtggtgggaaagtgaaagtgctctacatttccccactcaaagcgcttggcgtggatgta
gaaaataatctgcgtgcaccgttgactggtattgcgaggactgcctctcggatgggtttg
gatgtgcccaatatcactgtggcggttcgttcgggtgatacgccatcggcggagcgggcc
cggcaggtgcgtaagcctccagacattttgatcaccactccggagtcggcgtatttgatg
ttgacctcaaaagcgggggcgaccctttcggatgttgatgtggtgatcatcgatgaaatc
cacgccatggccggaaccaaacggggagtgcatctggcgttgacgctggagcgtttggaa
aagctcgtggggcggcctgtgcagcgagttggtttgtctgcaacggtgcgtcctttggaa
acggtggcgggtttcttgggcggtggcagacccgttgagattgtggctccacctgcggag
aaaaagtgggatctcactgtcactgtgccggtggaagacatgtcggatttgccggttcag
gagccgggatcaactatcggtgaactagtcatggatgatccgttggggattactggcgaa
tcagcgctgcctactcaaggctcgatttggccacacattgagcagcaggtgtacaaccag
gtgatgtcggcgaaatcgaccatcgtgtttgtaaattccaggcgttccgcggagcgttta
accagtcggttgaatgaaatctgggcgatggaacacgatccggaatcgctgtcgccgcag
ctgcgaagagatccggcgcagattatgtcgtcagcggatgtggcaggaaaagcaccacag
gtgatcgcacgtgcgcaccacggatccgtatccaaagatgaacgtgccaccaccgaaacc
atgctgaaggaaggtcggttgcgcgcagttatttccacctcctcgctggagttaggcatt
gatatgggtgccgtggacctggtgattcaggtggaatcgccaccgtccgtggcaagtggc
ctgcagcgcgtggggcgtgcggggcacacggtgggggcgacgtcgataggctccttttat
cccaagcaccgctccgacctggtgcaaaccgcggtgaccgtgcagcggatgaaggaaggg
ctgatcgaagagatccacgtgcctaaaaacgcgcttgatgtgctggcacagcagacggtg
gcggctgtctcgattaaagatgtgcaggtcgatgagtggtacgagactattcgcaaggcg
tatccgtaccgggatttggcgcgcgaagtcttcgattccgtcatcgacctggtcagcggt
gtgtatccctccacagattttgccgagctgaagccacgtgtggtgtacgaccgggtatca
ggcgtgctggagggccggccaggatcccagcgcgtggccgtgaccagtggcggaacaatt
cccgatcgaggaatgttcggagtcttcctcgtcggcgatggaccccggcgcgtcggcgaa
ctcgatgaggaaatggtctacgaatcccgcgtgggcgatgtgtttacgctcggggcgtcg
agctggcggattgaagagatcacccgcgaccaggtactggtcactcccgcgccggggcat
acgggtcggctgcctttttggacgggtgatgccgcaggtaggcccgctgagctgggcaaa
gctttaggcgcttttcgacgcacgaccctcgccgatccatccagctccggcttggaaggc
tgggcgcacgacaacctgatcgcctttttacaggagcaggaagaatccaccggtgtgttg
ccggatgagaagacgttggtgttggagcgtttcaaagatgaactgggcgactggcgcatt
gtcctgcacactccttatggacgaggagtaaacgcagcatgggctttggccgtcggtgcg
aaaatcgctgaagagaccggcatggatgctcaagctgtcgcaggtgatgatggcattgtg
cttcggttgccggaaggggatgaagatcccagcgcagcgttgtttatgtttgaggcggaa
gagatcgaaacgctagtgacagagcaggtgggtaactccgcgctgtttgccagcaggttc
cgtgaatgcgccgcgagggccctattgctgccgagacgaaaccccggcaagcgcgcaccg
ctgtggcagcaacgacaacgagcagcacagcttcttgatgtggccagaaagtacccgagt
ttcccgatcattttggaaacagtgcgcgaatgtcttcaagatgtttacgatctgcccgct
ctgaagaatctcattgaggatctacagctgcggaaggtaagaatcgcggaagtcaccacc
cagcagcccagtccttttgcctccgcattgctgttcaattacaccggtgcattcatgtac
gaaggcgacagcccgctcgcagagaaacgtgccgcagcgttggccctggatccggcactg
ttggcgaaattgctgggtgaggtggagcttcgacaattactggatcccgacatcatcgca
gaagtgcaccaacaattgcgcaggcaaggcgatcgtgcggcgagaaacaatgaagaactc
gcagattctttgaggattttaggaccgattcctttggatgaattgggcgaacacatcacc
tttgaaaaccccgacctggaggatcgagcgatgactgttcggatcaacggtcgggaacat
ttagcgcaggtcttggatgcacctttgcttcgagatgccttaggtgttcccgtaccgcct
ggtgtgcccgcgcaggtagaaaccattacggatgcgttggaacagttagtcaacaggtgg
gttcgtaccagagggccatttactgcgaatgatctagcagaagcctttggactgggcatc
gccacggcgatcaccgcactgcagagcgcacctgtgattgaaggccgctaccgacaaggc
gtggacgtgcaggaatactgtgcgacagaagtgttgtcgatcatcaggcgacgcagcctc
gcagcagcgaggaaacaaaccaggccggtttcacaatcagcctttgcgcgattcctgctt
gattggcaacagatcgcaccagtgggcgcctcacctgaactccgaggcgttgatggcacc
tacacagtcattgaacaactcgccggtgtacgtcttcccgccagtgcgtgggaagatctc
gtgttgccgcgccgggttgccgactattcaccgatccatctcgatgagctgacctccaat
ggggaagtcctcatcgtgggagcgggccaagccggaagccgcgatccgtggattagcttg
ctgcccgtggattatgcggcgcagttggtgggggaggcgtcgacaagcatgagcccattg
caggacgccgtgcttgaccagctgcgtgcgggaggcgccttcctgttttccgacattctc
gaagagaatttcggctacaccacagcccagctgcaagaagcgatgtgggggctggtggaa
gcaggcctggtcagccctgatagcttcgcgccgatccgcgcgcgcctagcgtcgggaacc
acggcgcatcgggcgaaacgtcgaccagcgagatcccggctgcgcacccgcaccagcttc
gcgagcgacgtgcccccagacatgcgcggacgatggacgctgtccgtgcaacccgccgac
gccaccagccgctccgtcgcacacggcgaaggctggctcgaccgctacggcgtgctcacc
cgcgggagcgtcgtcgccgaagacatcgtcggaggcttcgccctggcctacaaagtgctc
tccggcttcgaagaaagcggcaaagcgatgcgcggctacttcatcgaagggctcggcgcc
gcgcaattctccacgcccgccatcatcgaccgcctccgcggccacgacgattcccccgac
gtcgaaggctggccctccggcgccaccgacccagacgtctacctcatagccgccgccgac
cccgcaaacccctacggcgccgcacttccctggcctgagcaggggcccagccgcgccgcc
ggagccatggtcgtgctttgcgacggactcctcctcgcccacctcacccgcggcgggcgc
accctcaccgtgttctccgacaacatccccaaaatcgcgacagccctaatcacatacgaa
aggctcacggtagaaaaaatcaacggcgacaacgtcttcgactccccactcctggaacaa
ttccgcaaacacggcgccaccatcaccccgaagggaatgcgatttcgaccaccagtggca
cgggaaaccccctcagatacgcttcccaccaggccttttcgtggaggcttcggacggcgc
taa

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