Corynebacterium glutamicum AR1: CGLAR1_14395
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Entry
CGLAR1_14395 CDS
T03362
Name
(GenBank) transferase
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
cgq
Corynebacterium glutamicum AR1
Brite
KEGG Orthology (KO) [BR:
cgq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cgq03016
]
CGLAR1_14395
Enzymes [BR:
cgq01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
CGLAR1_14395
Transfer RNA biogenesis [BR:
cgq03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
CGLAR1_14395
Prokaryotic type
tRNA splicing ligases
CGLAR1_14395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
AIK86374
LinkDB
All DBs
Position
3042674..3043825
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AA seq
383 aa
AA seq
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MNHVVNFASHLEDAALKQAEATATMPFIYPHVALMPDAHFGLGSSVGTVFGTKGAIIPAA
VGVDIGCGMIGVCTNYTASDLEGRDLVTLRDYIERVIPLSPGNYNSTTLKETAKVKVAEL
EELAERDGVDLSHSPTWKRQLGSLGGGNHFIELCLDELDRVWMFLHSGSRGVGNKIAQKH
IKIAQAECKNEDLPDKDLAYLTEGTEEFESYIKELNWAQRFAFLNREEMMDRFARELGFF
VDKQLEEVERINCHHNYTVREEHYGETIWLTRKGAVLADEGTPALIPGSMGTASYVVSGK
GNAEALRSAPHGAGRRMSRNQAKKRFSTADLDSRMAGIVYRPGKEWIDEIPDAYKDIDQV
MADAADLVTIRHKLRQIVNVKGT
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgaatcatgttgttaattttgcttcacatttggaagacgcagccctgaagcaagccgaa
gctactgccaccatgccgtttatttacccgcatgtggcgttgatgcctgatgctcacttt
gggttgggttcgtcggtgggaacggtgttcggcaccaagggtgcgatcattccggcggct
gtgggtgtggatataggttgcggaatgataggagtgtgtaccaattacacggcctctgac
ctggagggacgtgatttggtgacgcttcgggattacatcgagcgggtgattccgttgtct
cctggaaattacaattccaccaccttgaaggaaaccgcgaaggtgaaggtcgcggagttg
gaggagctcgcggagcgcgatggtgtggatttgtcgcactctccgacgtggaagcgccag
ttgggttcgcttggtggaggtaatcacttcattgagttgtgtcttgatgagttggatcgg
gtgtggatgtttttgcactctggttcccgcggtgtgggtaacaagattgcccagaagcac
atcaagatcgcgcaggctgagtgtaagaatgaggaccttcccgataaggatcttgcgtac
ttgaccgaggggactgaggagtttgagtcttacatcaaggaactgaattgggcgcagcgt
tttgcgttcctcaacagggaagaaatgatggacagattcgcacgggagctgggttttttc
gtcgacaagcagcttgaagaggtcgagcgcatcaactgccaccacaactacacggtccgg
gaggagcactacggcgagaccatttggctcacccgtaagggtgccgtgttagcggacgaa
ggcacgccggcattgattccggggtcgatgggcaccgcgtcgtacgtggtcagcggcaag
ggcaacgccgaggcactgcggtcagcgccgcatggggcgggccggaggatgtcgcgcaac
caagctaaaaagcgcttctcgacggctgacctggattctcggatggcgggcatcgtctac
cggcccggcaaggagtggatcgatgaaattcccgacgcttacaaagacatcgatcaggtg
atggccgatgctgccgatttggtgacaattcgccataaattgcgccagatcgtcaacgtg
aaaggcacctaa
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