Nakaseomyces glabratus: 2887092
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Entry
2887092 CDS
T01024
Symbol
GVI51_D04257
Name
(RefSeq) uncharacterized protein
KO
K14326
regulator of nonsense transcripts 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
cgr
Nakaseomyces glabratus
Pathway
cgr03013
Nucleocytoplasmic transport
cgr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cgr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
2887092 (GVI51_D04257)
03015 mRNA surveillance pathway
2887092 (GVI51_D04257)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgr03019
]
2887092 (GVI51_D04257)
Enzymes [BR:
cgr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
2887092 (GVI51_D04257)
5.6.2.5 RNA 5'-3' helicase
2887092 (GVI51_D04257)
Messenger RNA biogenesis [BR:
cgr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
2887092 (GVI51_D04257)
mRNA cycle factors
Common to processing body (P body) and stress granule
2887092 (GVI51_D04257)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF1_Zn_bind
AAA_12
AAA_11
UPF1_1B_dom
AAA_30
AAA_19
ResIII
UvrD-helicase
SLFN-g3_helicase
DEAD
NPHP3_N
PIF1
nSTAND3
PhoH
Helicase_RecD
AAA_22
HSP20
AAA
UvrD_C_2
Motif
Other DBs
NCBI-GeneID:
2887092
NCBI-ProteinID:
XP_445603
UniProt:
Q6FVZ1
LinkDB
All DBs
Position
D:complement(432212..435106)
Genome browser
AA seq
964 aa
AA seq
DB search
MNFPAESNDPELAILADLEDAEELEFMQEVQGNLQVEPVERQAEGHACAYCGIDAPTSVI
KCNSCSKWFCNSKNGTVNSHIINHLILSHHHSVSLHPESDLGDTVLECYNCGCKNVFVLG
FVSAKSEAVVVLLCRIPCAQSKNPNWDTDQWQPLIEEKQFLSWVAEPASDEEIKLKAKLI
TPSQISKLENKWRSDKYATMDDVQDESKKVQDDILAGIGEEEDIPPLLLRYQDAYEYQRS
YGPLIKLEADYDKQLKESQALEHISVEWSLALNNRHLASFALSTFESSELKVAVGDEMIL
SYSGIQGEDWKGTGFIVRLPNSFKDMFTLELRPSKTPPPTHLTTGFTAEFIWKATSYDRM
QTALKNFAVDKKSISGYLYYKILGHQVVDLHFDVPMPKELSLPGYTKLNASQSKAVEHVL
QRPLSLIQGPPGTGKTVTSASIVYHLSKIRKDRILVCAPSNIAVDHLAAKLRDLGLKVVR
VTAKSREDVESSVSSLALHNLVAKGAKGVLKKLLKLKEEAGELSARDTKRFISLVKKTEK
SILEQADVVCCTCVGAGDRRLDMKFRTVLIDESTQASEPECLIPIVKGAKQVILVGDHQQ
LGPVILERKASDAGLKQSLFERLISLGHIPIRLEVQYRMNPFLSEFPSNMFYEGSLQNGV
TEEQRTLANSTFPWPINGIPMMFWANYGSEEMSANGTSYLNRTEAMNCERIITRLFRDGV
KPEQIGVITPYEGQRAYVLQYMQMNGALDKELYSNVEVASVDAFQGREKDFIILSCVRAN
EQQMIGFLRDPRRLNVGLTRAKYGLIILGNPRSLSRNTLWNHLLLHFRQKGCLVEGVLEN
LQVCTVPLTRPNVKKNRSTDYNYNFGVEMGDLPNTNDMDTQSLLSFGGQAGNFSNLFSND
SEFNNYLNNEYWNYTRNGKNAKPSAQNFESNTYSNEGPTLNSNYAQELAREQESVRNTLQ
SLEF
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgaactttccagcggaatcgaacgatccagagttagccatcttagcggacttggaagat
gcggaggagctagagtttatgcaggaggtgcaaggcaacttgcaagtggagccagtggag
agacaggcggagggccatgcgtgtgcgtactgtggtattgatgcgccaacgagtgttatc
aagtgtaactcgtgcagcaagtggttttgcaactcgaagaacgggactgtgaactcgcac
atcataaaccacttgattctgtcccaccaccactcggtgtccttgcacccggagtctgac
ctgggcgatacggtgttggagtgttacaactgtggttgcaagaacgtattcgtgttgggc
ttcgtctcagccaagagcgaggccgtcgtggtgttgctgtgcagaatcccctgtgcgcag
agcaagaatcccaactgggacaccgatcagtggcagccgttgatagaggagaagcagttc
ttgtcgtgggtcgctgaacctgcgtcggatgaggagatcaaactgaaggcgaagctgatt
acgcccagccagatcagcaagctggagaacaaatggagatcagacaaatacgctaccatg
gacgacgtgcaagacgaatccaagaaggttcaggacgacatactggcgggtataggtgaa
gaggaggatataccgcctctgctgctgagataccaggacgcttacgaatatcagagatcc
tacgggcccttgatcaagctggaggccgattacgataagcagttgaaggagtcccaagca
ttagaacatatcagtgtcgaatggtctctagctctgaataataggcacttggcatccttt
gcactatctacatttgaatcaagtgaattgaaagtcgcagtaggtgatgagatgattttg
agctattctggtattcaaggtgaagattggaaaggaaccggttttattgtccgtttacca
aacagtttcaaagatatgtttactctagagttaaggcctagtaagacacctccaccaact
cacctaaccactggatttactgccgagtttatatggaaagctacatcatatgacagaatg
caaactgccctaaaaaactttgcagtggacaaaaaatccatttcaggttatctttactat
aagattctgggccatcaagttgtggatttacactttgacgtgcctatgccaaaggagctt
tctctaccaggctacactaagctaaatgcttctcaatctaaagctgtagagcacgtctta
cagagaccactgtccctgatccaaggtccaccaggtacaggtaaaactgttacatcagcc
tctattgtgtatcatctatcaaaaattcgcaaggatagaatactggtttgtgcaccttct
aacattgctgtcgatcatcttgctgcaaagctaagagatttaggtttgaaagtcgtcagg
gttacagccaagagcagagaagatgtagaaagttctgtttcatctctagctcttcataat
ttggttgccaaaggtgctaaaggtgtattgaagaaacttttgaaattgaaggaagaagcc
ggtgaactctctgcccgtgatacaaagaggtttattagcttagtcaagaagacagaaaag
agcatcttggaacaggcggatgttgtctgttgcacatgtgttggtgcaggcgatagacgt
ttagatatgaaattcagaactgttcttattgatgagagtactcaagcatctgaacctgaa
tgtctgatacctattgttaagggtgctaagcaagttatcttagttggtgatcaccaacaa
ttaggtccagttattttggaaagaaaagctagtgatgctggtttaaagcaatctcttttc
gaacgtttgatctccttggggcatattccaattagattagaggttcaatatcgtatgaat
ccttttttaagtgaattcccaagtaacatgttctatgagggtagtttgcagaatggtgtt
acggaggagcaaagaactttggccaacagtactttcccatggcctattaatggtatacca
atgatgttctgggccaattatggttctgaagaaatgtctgcaaacggtacatcatatttg
aatagaacagaagccatgaactgtgagagaattataacaagactcttccgtgacggtgtt
aagcccgaacaaattggtgtgattacaccatatgaaggtcagcgtgcttatgtcttgcaa
tacatgcaaatgaacggtgcgttggacaaggagttgtattctaacgtggaagttgcatca
gtggatgcattccaaggtcgggaaaaggatttcattattctttcctgtgtgcgtgctaat
gaacagcaaatgattggtttcctgagagacccacgtcgtctaaatgttggtctcacccgt
gcaaaatacggtttgattattttaggtaatccaagatctctttcaaggaatacgttgtgg
aaccacctgttgttacatttcagacaaaaaggttgtttggtagaaggtgttctggaaaac
ttacaagtttgtactgtgccattgaccagacctaacgtcaagaaaaatcgttcaactgat
tacaattacaattttggtgtggaaatgggcgatttgccaaacaccaacgatatggatacc
cagagtttgctatcattcggtggacaagctgggaacttcagtaatcttttctccaatgac
tccgagttcaataactacttgaataacgaatactggaactatacacgtaacggaaagaat
gcgaaaccgtctgctcaaaactttgaaagcaatacatactctaatgaaggtcctacacta
aactctaactatgctcaggaattggcaagagaacaggagagtgtgaggaatacattacaa
tctttggagttttga
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