Nakaseomyces glabratus: 2887692
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Entry
2887692 CDS
T01024
Symbol
nup116, GVI51_F05775
Name
(RefSeq) nup116
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
cgr
Nakaseomyces glabratus
Pathway
cgr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cgr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
2887692 (nup116)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgr03019
]
2887692 (nup116)
03036 Chromosome and associated proteins [BR:
cgr03036
]
2887692 (nup116)
Messenger RNA biogenesis [BR:
cgr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
2887692 (nup116)
Chromosome and associated proteins [BR:
cgr03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
2887692 (nup116)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nucleoporin_FG
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
2887692
NCBI-ProteinID:
XP_446238
UniProt:
Q6FU56
Structure
PDB
PDBj
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All DBs
Position
F:636264..639371
Genome browser
AA seq
1035 aa
AA seq
DB search
MFGQPRLFGANSQPFGSTNNTGSTGAFGNVQNNNVQSGFSGFGSNNNASNAPQSGAFGAN
TSSLNSPFGSNNNAMGTPSNSTTSGGGLFGMQNPNTSGMAGGNSLFGMNNNGNTGTTMMG
GLPVGGMNAGAGTGTAIKPFQVVEEKDMTTNAINMYQSITFMNEYRNYSFEELRMQDYKA
GRKFANSSATSTGFGTGQNQQFGAFGNTNSAQPGAQSSPFGQKPASGGLFGGNGVGSTST
GLFGSNQTSTNTFGANNGSTFGNNAASSGGLFGSTNNTNTNTGMFGSASNANSGGLFNQQ
NQTQQQQSSPFGASSGFGKPPASSGGLFGQTGANPFSSNNANTAFGQTAQQQTPNQGGLF
GQSNQSQGTGLFGQSGQQQPQGGLFGQAANGNSLFGSKPQPSTGFGQQTTSAGGFGSSGG
LFGGQNTQQQGGLFNQTSQTQTGGLFGQNQPPNQAGGLFSQTQNTNANSPFGMKSATPAG
GLFGNNQGQQGGGIFNQNQNQQQGNTTGLFGGGQSQQTQSNTAGSLFGQKPTGFGSTAQP
NTSSFGNTQSSGGLFGNKSTGGGLFGSTNTQNTTPSFGSGGTQSLLGAKPAGGLGGLGAQ
QPAATQTSGLFNKPATSTSFGGTSSLFGNKAGPQQGSTGGLFGSNSTSNIGAGLATSQQF
SNNSANQQIGNPSQNNDQEKLQQQQLLVTNPYGTNELFSKVQQAAPGSMQVSVQIQVSAT
KIDADNKKKSDLISAYKHTPKPLFAAALSGKGLVAEKTNEIKNDLDKETSTRIMNNEIDA
NFQQIGSKLFEPDSLMFKQLLKSKGNHRNKDLKSKEKLFIANVADSNLNEADKDKAKNEI
AKLNASQVVATTLASSVRETEKQEKIETDICNENAISESKLDGIDDLEFVDENYYISPSL
DTLATLSKYEIQKVENLVVGNKQYGKIEFLDPVDLSDIPLGSICDDLVVFQPMSVLLYNN
STNVPEKGKGLNVRARISCYNCYPLDKSTRKPIKDPNHRIMERYSEKLKKIPHTHFESYD
PASGTYCFTVDHALI
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtcagcctaggttgtttggtgcgaactcgcagccgtttggatctactaataat
actggatcaacaggcgcatttggaaatgtacaaaacaacaatgttcaatctggttttagt
ggttttggtagcaacaacaacgcaagcaatgcaccacaaagcggtgcttttggagcaaat
accagtagtttgaactctccttttggatcaaacaacaatgccatgggaactccatccaat
tccacaacaagtggaggtggtcttttcggtatgcagaaccctaatacatctggaatggct
ggtggcaactctttatttggtatgaacaataatgggaatacaggaactacaatgatgggt
ggcttgcccgtcggtggtatgaatgctggtgctggtactggtactgcaattaaaccattt
caggttgtggaagagaaggacatgacaaccaatgctattaatatgtatcaaagtatcacc
tttatgaatgagtaccgcaactattcttttgaagaattgagaatgcaagattataaagct
ggtagaaaatttgctaacagttccgctacttcaactggttttggcacgggccaaaatcag
cagtttggtgcatttggtaatactaattcagcacagcctggtgcacaatctagtccattc
ggccaaaagccagcatccggaggtttatttggaggtaatggtgtgggatccacctcaaca
ggtctttttggatccaatcagacctctacaaatacttttggtgctaacaacggaagcaca
tttggaaacaatgctgcaagtagtggcggtcttttcggtagcacaaataataccaatacc
aacactgggatgtttggttcagcatctaatgcaaattcgggaggtttattcaaccaacag
aatcaaacacaacaacaacaatcatctcccttcggggcttccagtggttttggtaaacct
cctgcatcttctggagggctgttcgggcaaactggcgctaacccatttagtagcaataat
gctaatactgcttttggacaaactgcgcaacaacaaacgccaaatcagggaggtcttttt
ggtcaaagcaatcaatcacaaggcaccgggctttttggtcagtcagggcaacaacaacct
cagggcggtctttttggtcaagctgctaatggtaattccttatttggtagtaaacctcaa
ccatcgactggttttgggcaacagacaactagtgccggcggattcgggtcttcgggaggt
ttatttggagggcaaaatacacaacaacaaggcggattatttaaccaaacttctcaaacc
caaactggtggtctttttggacaaaatcagccaccaaatcaagcgggtgggttattctca
caaactcaaaatacaaatgctaattcaccctttggaatgaaatcagctactcctgctgga
gggctatttggaaataaccaaggccaacaaggaggtggtattttcaatcagaatcaaaat
caacaacaaggaaacactacaggcttgtttggtggtggccaaagtcagcaaactcaatct
aatacggcgggcagcttattcggccaaaaacccactggttttggttctactgcacaaccc
aatacctcttcgtttggtaatactcagtcttctggaggtctattcggtaacaaaagtact
ggaggtggactttttggatcgactaatactcaaaatactacccctagctttggatctggt
ggaactcagtctttgttgggtgcaaagcctgctggtggtttgggtggtttgggtgcacag
caacctgcagcaactcaaacatctggtttgttcaacaaacccgctacctcaacatcattt
ggtggaacatcaagtctgtttggtaataaagcaggacctcaacagggtagcacaggtggg
ttgtttggtagtaactcaacctcaaacattggtgcgggtttggctactagtcaacagttt
tcaaataatagcgctaatcagcaaataggaaaccccagccaaaataacgatcaagaaaag
ttacaacaacagcaattactggtcactaatccttatggaacgaatgaactgtttagcaag
gttcaacaagcagcaccgggctcaatgcaggttagtgtgcagattcaggttagtgcaact
aagattgatgcagataataaaaagaaaagtgatttaattagtgcctataagcatacacca
aaacctttatttgcagcagctttgtctggaaaaggcctcgtagctgagaaaactaatgaa
ataaaaaatgatctagataaagaaacctcaacaagaataatgaataacgagattgacgct
aatttccaacaaattggttcaaaacttttcgaacctgactctcttatgttcaagcagttg
ttaaaatcgaaaggtaatcacaggaataaagatttgaagagcaaggagaagctttttatc
gcaaatgttgctgatagtaatttgaacgaagccgataaagacaaggccaaaaatgaaata
gctaaacttaacgcttctcaggtcgttgccacaaccttggcttcttctgtgagggagact
gagaaacaggaaaaaattgaaactgatatatgtaacgagaatgcaatttctgaatctaag
cttgatggcattgatgatctagaatttgttgatgaaaattattatatttctccttctctt
gatacattagctacactatccaaatatgaaattcagaaggttgagaatttggttgttggc
aataaacaatatggtaagattgagttcttagatcctgttgatctgtcggatattcctttg
ggttcgatatgtgacgatctagtagtttttcagccgatgtccgtcttgttatacaataat
agcaccaacgttcctgaaaagggtaaaggtctaaatgtaagggcacgtataagttgttac
aattgttatcctttagacaaatctaccagaaagccaatcaaggatcctaaccatagaatt
atggaaaggtactcagagaagctgaagaaaattcctcatactcattttgaatcatatgat
ccggcttctggaacatactgcttcactgttgatcatgcattaatatag
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