Nakaseomyces glabratus: 2887906
Help
Entry
2887906 CDS
T01024
Symbol
GVI51_F04631
Name
(RefSeq) uncharacterized protein
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
cgr
Nakaseomyces glabratus
Pathway
cgr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cgr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
2887906 (GVI51_F04631)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgr03021
]
2887906 (GVI51_F04631)
03019 Messenger RNA biogenesis [BR:
cgr03019
]
2887906 (GVI51_F04631)
Transcription machinery [BR:
cgr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
2887906 (GVI51_F04631)
Messenger RNA biogenesis [BR:
cgr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
2887906 (GVI51_F04631)
U7-dependent histone pre-mRNA processing factors
2887906 (GVI51_F04631)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B
Lactamase_B_6
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Motif
Other DBs
NCBI-GeneID:
2887906
NCBI-ProteinID:
XP_446189
UniProt:
Q6FUA5
LinkDB
All DBs
Position
F:complement(532469..534784)
Genome browser
AA seq
771 aa
AA seq
DB search
MDVKERSNQFRFFSLGGGNEVGRSCHIIQFKGKTIMLDAGIHPAYQGMASLPFYDDFDLS
IVDVLLISHFHLDHAASLPYVMQKTNFKGRVFMTHPTKAIYRWLLRDFVRVTSIGSQSSN
AEDDNLYSNEDLIESFDKIETIDYHSMIDVNGIKFTAFHAGHVLGAAMFQIEIAGLRVLF
TGDYSREIDRHLNSAEVPPLPSDILIVESTFGTATHEPRLHREKKLTQLIHSTVNKGGRV
LMPVFALGRAQELMLILDEYWSQHKEELGSNQIPIFYASNLARKCLSVFQTYVNMMNDNI
RKKFRDSQTNPFIFKNIAYIKNLDEFQDFGPSVMLASPGMLQNGLSRDLLERWCPDEKNL
VLITGYSVEGTMAKYLLLEPDTIPSVSNPEVTIPRRCRVEELSFAAHVDFQENLEFIEQI
NASNIILVHGEPNPMGRLKSALLSNYASFKGTEDEVHVHNPRNCYELDIECKGVKVAKAV
GNIVDEIKRTEEEVVKPENDAGQSKEGIEEFTGKTQDVRKDAEGEGAIISSILVSDEKNF
DLNLVSLSDLREHHPELSTTVIRERQTIQVDCKKELIYWHICQMFGDVSVLIDDDNVTNT
KETKLETSRGMLVLQIMGAIRLTVQHNKAILEWTQGLISDTIADSIIAILMSVDSAPVSV
KKSSNSCSHGHEHATPILSQPSETDKIKQVAELFKTQFGDSFTLILNKDDDNDTAEEKED
DEFVKGLITIGKNTASINFTDMCVVECNSNPLKGRVESLLKIGIDMVSSLC
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atggatgttaaggaaagaagcaatcagtttagatttttctctttgggtggtggaaatgaa
gttggaagatcatgccatataattcaattcaaaggtaagacaatcatgctagatgccggt
atccatcccgcttatcaaggaatggcgtctttgccgttttatgatgactttgatttatca
atagttgacgttttactcatatcgcatttccatttagatcatgcagcctctttgccatat
gttatgcagaaaactaatttcaaaggaagagtttttatgacacatccaacaaaagcaata
tacaggtggttgctcagagattttgttagagttacaagtatcggtagtcagagtagcaat
gcagaggatgataatttatattccaatgaggacttgattgaatcattcgataaaatagag
accattgattatcactcaatgatcgatgtgaatggtataaaatttactgcctttcatgcg
ggtcatgtgctcggtgcggcaatgtttcaaatagaaatagccggtcttcgagtattattt
acaggtgattattcaagagagattgacagacatttaaactccgccgaagtgccgccttta
ccatctgatattcttattgtagaatcaacctttgggacagctacacatgaaccaagactg
catagagagaaaaaattaacccagttaatacactcaactgtgaacaaaggaggtcgtgtg
cttatgcctgtctttgctcttggtagagcacaagaactaatgctgatattagacgaatat
tggtcgcaacataaagaagagctaggatcaaatcagatacccattttctatgcctcaaat
ttggctcgtaagtgtctgagtgtttttcagacatatgttaatatgatgaatgataatatt
aggaagaaatttagagactcccaaaccaatccctttattttcaagaatattgcatatatt
aagaacttggatgaatttcaggatttcggaccaagcgtaatgcttgcctccccgggtatg
ttacaaaacggtctctctagagacttattagaaaggtggtgtcctgatgaaaaaaacctt
gtacttattactggttattctgtcgaaggtacaatggctaagtatcttcttttagaacct
gatactatcccttcagtatccaatccagaagtaacaatacctaggaggtgtagagttgaa
gaactctcatttgctgcacatgttgactttcaagaaaatctggaatttattgaacagatt
aatgcgtcaaatatcattttagttcacggtgaaccgaatccaatgggtcgtttaaagtct
gcgctattatcaaactatgcttcatttaaaggaacagaagatgaagtacatgttcacaat
ccaagaaattgctatgaacttgatattgaatgtaagggtgttaaagtagcaaaagctgtg
ggaaatatcgtagacgaaatcaaaaggacagaagaagaagtagtaaagccagaaaacgat
gctggacaatctaaagaaggtatagaagagttcacagggaaaacacaggatgtgcgaaag
gatgcagaaggtgaaggtgccattatatcaagtattttagtttccgacgaaaaaaacttt
gatctgaatcttgtttcattgtcagatttgagggaacatcacccagaattatcgacaaca
gttattcgagaacgtcaaacaattcaagttgattgtaagaaagagcttatatattggcac
atatgtcagatgtttggagatgtttcagttctaattgatgatgataatgttacgaatact
aaagaaacgaaattagaaaccagcaggggtatgcttgttttgcagattatgggagctatt
agattgactgtacagcataacaaagcaattctagaatggacacaaggattaatcagtgat
acaattgctgactctattatagcaatcctaatgagcgtcgattctgcaccagtgagtgtt
aaaaaaagtagtaattcatgctctcatggccatgagcatgctacacccatactttctcaa
ccttcagaaactgataagataaagcaggtagcagaattatttaagacacaatttggggat
tcatttactctcattttaaacaaagatgatgataatgatactgctgaagagaaagaagat
gatgaatttgtgaaagggctaattactattggaaagaatacagcttcaataaatttcact
gatatgtgtgttgtggaatgtaactccaatccactaaaaggtagagttgaaagccttttg
aaaataggaatcgacatggtctcttctttatgctag
DBGET
integrated database retrieval system
