Nakaseomyces glabratus: 2887997
Help
Entry
2887997 CDS
T01024
Symbol
GVI51_G09933
Name
(RefSeq) uncharacterized protein
KO
K12600
superkiller protein 3
Organism
cgr
Nakaseomyces glabratus
Pathway
cgr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cgr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
2887997 (GVI51_G09933)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgr03019
]
2887997 (GVI51_G09933)
Messenger RNA biogenesis [BR:
cgr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
2887997 (GVI51_G09933)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_22
TPR_19
TPR_2
TPR_16
TPR_1
TPR_11
TPR_8
TPR_17
TPR_14
TPR_12
TPR_CcmH_CycH
TPR_6
CFAP70_mid_TPR
ANAPC3
CFAP70_TPR_C
ARM_TT21_N
TPR_9
RMD1-3
HIR3_bundle
TPR_7
Fis1_TPR_C
Motif
Other DBs
NCBI-GeneID:
2887997
NCBI-ProteinID:
XP_446799
UniProt:
Q6FSJ5
LinkDB
All DBs
Position
G:976416..980651
Genome browser
AA seq
1411 aa
AA seq
DB search
MSNVKQLLKEAKVELGRGDFEEARNLSLKVLKLDPDNYFAHVFLGKCFSMIPNSLYDSVE
HYKKAIDINSQSLLAWKGLFLLFKDVTGIFPNVVSYDEYFTLCAKYADVLAEQGESQIEL
IDDIKKMRRDYQESEEQYLRHLVPGKDLSEKLGRYLLSSSYALDKLIKLLNKKEQDRIAQ
IVSKERLKFSTSDPSFQIKINSLAWEVYADSEVDQMYNQLVNIVDDDEKRAKLEEEWLKY
RLRVLRSMPASMKPLYFEKVKTTIEDMVLVNHDSLDAWKLYFEWQDYSELDKIELKYILQ
FFKKFPNEPLAVILYSWASSKYSQYDKVQIQKVMTDETQADAKSEIGSATESSSAEESDE
EGLKQEDVKALMDTPEEYVGLVEEDILLAMTENIKKAKTSILAHRIIVYYHLLSREYETA
LPTVKAGISLIAYNVKDLGYPFFNSKREFTIALGTVYTYVDTPKNHEAALSLFDKVLLEQ
PSNTEAKLGKGFIYMERENWTEAYELLLAVSSKYADRWDVLSEIGWCRVMLGQCEQAILD
FKEVLKNIHGMDLRTQEFRALNYWRLAETYLNIQESEHVSEGFENVKLAYKILIQSIKAL
DGYAPSYCSLGKIYSNYYGDFSRAFRCHYRAFELDAGDIISAEYLARTYADATNWTLALE
VSERLVKSEKSKKALRKVSWPYRILGVAYLEKQQDAESIQWFQLALRIDPTDVESWIGLG
QSYLNCGRVEASLKVFERALDLDEHHSYALYYKAVCHSQLGEYEESLKLMYNLVGENPKT
IPFKVSCATLISEYSKDLYSQGYLLKSISESQKAILLIDDINNNGGLQSQEVWIALFTCI
NNYLLVQSEIDEMPIELLLNIFQNVNIKKVASVDAIDRLSLNDIIDNTSSSSIEIASKLL
ILCAKYALYLTGEDISQATVGSSLWGNLGLAELNAYSLFDETEYRESAIMCFKKSIQFQS
NYVESWFGLAVSTMDFNYRVSQHCFIKAMSLSPRDPTIIFAYAMLSLRCNDIDLATQLIN
KAQTISPAESSPWLGLALLNEKKNGSSNSVSLFSHAFVLSNGRSPSIQLLFAKSVLNSQI
GSGIMDGDLSSIEQLTSVASALEQYFKKVPNNPFALQCALLCFERLHDFNGTDEICKKLL
NILEERYEKTEDENELLHFALFKSHVARIELESGKYQSCLENADISQDLLNEYSYAYLTK
AKLSNYLCLGLGNFFLNNLDKTFEYFQTLLGESKESGTIICLVSKILYEIGMEDSKEIAL
QELNEYLDENAGELKILLILTAMALIDDQECELKSLLKSLSGLPNSKWLLDKERSIPWLV
NVIEKRIAQAEKSTMDKRSVFYFPNDNRVWGSLSKRIQHRIVCAGQNKVSTKQFSNLTAE
IRSVSYLQRSIFLSPSNCKAIKTLESCFVNM
NT seq
4236 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatgtaaaacagttgttgaaagaggccaaagtggaattgggccgaggtgatttt
gaagaagcccggaatttgtcattgaaggttttaaagttagaccctgataattactttgcg
catgtctttttaggtaaatgtttttccatgattcccaattctttgtatgattcggtggag
cattataagaaagcaattgatatcaacagccagagtttattagcttggaaaggtttattt
ctattatttaaagatgtgaccggtattttccccaatgtggtatcctatgatgaatatttt
acactttgtgctaaatatgccgatgttcttgctgaacaaggggaatcacaaattgaatta
atcgatgatataaagaaaatgagaagagattatcaggaatctgaggaacaatatctgaga
cacctagtaccaggaaaggatctttctgaaaaactggggcgctatcttttaagttcttcc
tacgcccttgataaattgataaagttattgaataagaaggagcaggaccggattgctcag
atcgtaagtaaggaaagactcaaatttagcacgtcagatccttcatttcaaataaaaatt
aatagtctggcttgggaggtgtatgccgattccgaagttgatcagatgtataatcaactg
gttaatattgtagatgatgatgaaaaacgagcaaaattagaagaagaatggttaaaatac
agattacgagtactacgttcaatgccagcatctatgaaacctttatattttgagaaagtc
aaaactactattgaagatatggttctagtgaatcacgattctttagatgcttggaagctt
tattttgaatggcaagattatagtgaattggataaaatagaactaaagtatattcttcaa
ttcttcaagaaattcccaaatgagccattagctgtgatattgtactcatgggcctcttct
aagtattctcagtatgataaagtgcaaattcaaaaagtgatgactgatgaaacacaggct
gatgctaaaagtgaaattggttcagctactgagtcatcgtctgctgaggaatctgatgaa
gaaggattgaaacaggaagatgtgaaggctctaatggatacaccagaggagtatgtagga
ctagtggaagaggatatactgttggcaatgactgaaaatattaagaaagctaaaactagt
attctggcgcatagaattatagtgtattaccatttattatcaagggaatatgaaactgcc
cttccaactgttaaagctggaatttcattgatagcgtataatgttaaggatcttgggtat
cccttctttaattcaaagagagaattcacgattgcgcttggtactgtctacacatatgtg
gatacgcccaaaaatcatgaagctgctttgtcgttatttgataaggttctgttggagcaa
ccatctaataccgaagccaaactaggaaaaggatttatctacatggaaagagaaaactgg
accgaggcctatgaattgcttcttgctgtctcatcaaaatatgcagatcgatgggacgtt
ctttcagagattggctggtgtagggtaatgcttgggcaatgtgagcaagcaatcctagac
tttaaagaggttttgaaaaatattcatggtatggatttgagaacacaagaatttagggca
ttgaattactggaggttggccgagacttacctaaatattcaagaaagtgagcatgttagt
gagggctttgagaatgtcaagctcgcctataaaattctcatccaatccattaaggcttta
gatggttatgctccaagctactgttcattaggtaagatatattcaaattattatggtgat
tttagcagagcctttaggtgccattatcgggcttttgaactagatgccggtgatattata
tctgcagagtatttggcaagaacctatgctgatgccaccaactggacgcttgctctagag
gtttcagagcgtcttgtaaaatcggaaaagtctaaaaaggctctgagaaaggtatcctgg
ccatatcgtatactgggtgtcgcctatttggagaaacaacaagacgcggaatcaatacag
tggtttcaacttgccttaagaatcgatccaacagacgttgaatcatggattggacttgga
cagtcttacttaaattgtggtagagtcgaggcctctttaaaggtttttgaaagggcttta
gatcttgatgaacatcacagttatgctttatattataaagcagtgtgccattcacaatta
ggcgaatatgaagaaagcctgaaactaatgtataacttagttggagaaaatccaaagacc
attccattcaaggtaagctgcgctacactaatttcagaatactccaaagacttgtatagc
cagggatatttgttaaaaagtatatctgaaagtcagaaagctattcttttaattgatgat
atcaacaataatggaggtctacaaagtcaagaagtttggattgctctgtttacttgtatt
aataattatcttctggttcagtccgagattgatgagatgccaattgaattactattgaac
atttttcaaaatgttaacatcaaaaaggtagcatctgtagatgcgattgacagattatct
ttgaatgatattatcgacaatacatcgtccagcagcattgagatagcaagtaaattgttg
atactatgtgctaaatacgcattatatttaactggtgaggatatttcacaagcaactgtg
ggcagctcactttggggaaatttagggttagctgaactaaatgcgtattctctttttgat
gaaactgagtatagagagagtgcaatcatgtgctttaaaaaatcaatccaatttcaatca
aactatgttgaatcttggtttggattggcggtttcaacaatggattttaattatcgagtt
tcacaacactgttttataaaggcaatgtcactttctccaagagatcctaccattatattt
gcctatgctatgctttccttgagatgtaacgatattgatttagcaacacaattgattaat
aaagctcaaacaatatcaccagcagaatcatcaccttggttaggtctggctcttttaaac
gaaaaaaagaatgggtctagtaatagcgtatccctcttctcccatgcatttgttctctca
aatggtagatctccctcaatacagttgctatttgcaaaaagtgtactaaactcgcaaatc
ggatccggtatcatggatggcgatttaagctctattgagcaacttacatcggttgcaagt
gccttggaacaatatttcaaaaaagtgccaaacaatccgtttgctcttcagtgtgctttg
ttatgttttgaaaggttacatgatttcaatgggactgatgaaatttgtaaaaagcttctt
aacatattggaagagaggtacgaaaagactgaagatgagaatgaactactacattttgcg
ttgttcaagtcccatgttgccagaattgaacttgaaagtggtaagtatcaatcctgtctg
gaaaatgctgatatctcacaagatctattaaatgagtatagttatgcttatctgactaaa
gcaaagctttcaaattatctatgtttgggtttaggcaatttcttcctaaacaatctagat
aaaacatttgaatactttcaaacattattaggagaatcaaaagaaagtggtacgataata
tgcttagtgtctaagattctttatgaaattggtatggaagatagtaaagagattgctctc
caggagttgaacgaatacctagatgaaaatgcaggtgaattgaaaatattactcatatta
acagcaatggccctaatagatgaccaagaatgtgaattaaagtctttgctgaaatcatta
tcaggcctcccaaattctaagtggcttttggataaagagagatctattccctggctggtc
aatgtaattgaaaaaagaatagcacaagctgaaaaatctactatggataaaaggtctgta
ttttatttccctaacgacaatagggtatggggttctttatcaaaaagaatacaacacaga
attgtatgtgctgggcaaaacaaagttagtaccaagcaattcagcaacctaactgctgag
attaggagtgtttcatacttacaaagaagtatttttttgtcaccatcgaattgcaaggcc
ataaagactctagagtcatgctttgttaatatgtag
DBGET
integrated database retrieval system
