Nakaseomyces glabratus: 2888182
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Entry
2888182 CDS
T01024
Symbol
GVI51_G03333
Name
(RefSeq) uncharacterized protein
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
cgr
Nakaseomyces glabratus
Pathway
cgr03018
RNA degradation
cgr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cgr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
2888182 (GVI51_G03333)
09123 Folding, sorting and degradation
03018 RNA degradation
2888182 (GVI51_G03333)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgr03019
]
2888182 (GVI51_G03333)
03041 Spliceosome [BR:
cgr03041
]
2888182 (GVI51_G03333)
Messenger RNA biogenesis [BR:
cgr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
2888182 (GVI51_G03333)
mRNA degradation factors
5'-3' decay
Lsm complex
2888182 (GVI51_G03333)
Spliceosome [BR:
cgr03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
2888182 (GVI51_G03333)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
2888182
NCBI-ProteinID:
XP_446514
UniProt:
Q6FTD0
LinkDB
All DBs
Position
G:349462..349980
Genome browser
AA seq
172 aa
AA seq
DB search
MLPLYLLTNAKGQQMRIELKNGDIVEGELTNVDNWMNLTLANVNEYKGSENNTNLPQVKV
VKSKEIYVRGVYIKYITLQDDIIEKVKQQINNNNNNNNNRKFNNRNHQNNYGYRRNNTGG
NYNNGNNNNNNNNNNNNRRNYNNRRYYNNQNQNQNQNQSQGQSQGQKNQQFE
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgctaccactttacttgttaactaatgccaagggacagcagatgcgtatagagctgaag
aatggtgatatagtggagggtgagctgactaatgtggataattggatgaatctgactctt
gccaatgtgaatgaatacaaaggtagtgagaacaacacaaacttgcctcaagttaaagtt
gttaagtctaaagaaatctacgtcaggggtgtttatataaaatatatcacacttcaagat
gatatcatagagaaggtcaagcaacaaatcaacaacaataataataataacaataataga
aagtttaacaacagaaatcatcaaaacaactacggatataggaggaataacactggtggt
aattacaacaatggcaacaacaacaataataataataacaataataataacaggagaaac
tacaacaaccgtcgctactacaacaaccaaaaccaaaaccaaaaccaaaaccaaagccaa
ggtcaaagtcagggtcaaaagaatcaacaatttgagtag
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