Nakaseomyces glabratus: 2888281
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Entry
2888281 CDS
T01024
Symbol
RFA1, GVI51_G00583
Name
(RefSeq) RFA1
KO
K07466
replication factor A1
Organism
cgr
Nakaseomyces glabratus
Pathway
cgr03030
DNA replication
cgr03420
Nucleotide excision repair
cgr03430
Mismatch repair
cgr03440
Homologous recombination
cgr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cgr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
2888281 (RFA1)
03420 Nucleotide excision repair
2888281 (RFA1)
03430 Mismatch repair
2888281 (RFA1)
03440 Homologous recombination
2888281 (RFA1)
03460 Fanconi anemia pathway
2888281 (RFA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgr03000
]
2888281 (RFA1)
03032 DNA replication proteins [BR:
cgr03032
]
2888281 (RFA1)
03400 DNA repair and recombination proteins [BR:
cgr03400
]
2888281 (RFA1)
Transcription factors [BR:
cgr03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
2888281 (RFA1)
DNA replication proteins [BR:
cgr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
2888281 (RFA1)
DNA repair and recombination proteins [BR:
cgr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
2888281 (RFA1)
MMR (mismatch excision repair)
2888281 (RFA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
2888281 (RFA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
tRNA_anti-codon
Rep-A_N
CDC24_OB3
DUF223
Motif
Other DBs
NCBI-GeneID:
2888281
NCBI-ProteinID:
XP_446394
UniProt:
Q6FTQ0
LinkDB
All DBs
Position
G:complement(81012..82895)
Genome browser
AA seq
627 aa
AA seq
DB search
MSAELTKGDFVAIFTNQQRYQDPANGVYQVINIRKADPSKPNKKFLIMISDGVYHMKALF
KADAIPKLHSMNIDRGDIIKTLRVEPLLIKEKKLVLVIEDFDMVQSGAEVVDSNTQFLDS
VLANRLNEVIAARKDPNSPFPQQQQQVDSSSNVNGNGTLGMPSSTTAIGNATTSHNNKFN
DSASQKSRAIFAIEQLSPYQNVWTIKARVSYKGDIKTWHNQRGEGKLLNVNFLDTSGEIR
ATAFNDNATAFNEILQEGKVYYVSKARLQPAKPQFTNLSHPYELNLDRETVIEESFDENN
VPKTHFNFIKLDNIQSQENNSNVDVLGIIQTVNPHFELTSRAGKKFDRRDIQIVDDSGFA
ISVGLWNQQALDFNLPEGSVVAIKGVRVSDFGGKSLSMGFNSTLIANPEIPEAYKLKGWY
DQQGKDQDFTSLKQDAGAGTTSAANLAKFISQRITIARAEAENLGKNERGDFFSVKAAIS
FMKVDNFAYPACSNENCNKKVIEQPDGTWRCEKCDINNPSPRWRYILTISIIDETGNLWL
TLFDDQAKQLLGVDANTLMSLKENDPDEFTRTTQNVQMNQYDFRIRAREDNYNDQTRIRY
TVANLHKLNFKAEADYLADELTKVFLT
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcagagttgactaagggcgattttgtcgcaatattcactaaccagcagcggtac
caggatcctgccaatggtgtttatcaagtgattaatatccgcaaagctgatccaagcaag
ccaaacaagaagtttcttattatgatatctgacggtgtgtaccacatgaaggcgttattt
aaagccgatgctattccaaagcttcattcaatgaatattgacaggggtgacattatcaag
actctgagagtggaaccattgttgattaaggagaagaaacttgttctagttattgaagat
tttgatatggtccaatctggagcagaagtagttgatagcaacactcaatttttggacagt
gtacttgctaacagattgaatgaagtcatcgccgctagaaaagatccaaattccccattc
ccacaacagcagcaacaggtagattcgagctctaatgttaatggtaatggtacactagga
atgccatcatcaacaactgcaattggtaatgcaacaactagccacaacaacaaatttaat
gattctgcttctcaaaaatcaagagcaatctttgccattgaacaactatcaccataccaa
aatgtttggactattaaagctagagtttcttataagggtgatattaagacttggcataat
caaagaggtgaaggtaagcttcttaacgttaatttcctggatacctctggtgaaattaga
gctaccgcattcaatgataatgctactgcttttaatgaaatattgcaagagggtaaagtt
tattatgtttcaaaagcgagactacaacctgctaaacctcaatttaccaacttgtctcac
ccttacgaactgaatttggatagagaaactgtcattgaagaatcgtttgatgagaataac
gtaccaaagactcactttaactttattaaattagacaatatccaatctcaagaaaacaac
tctaacgtagatgttttaggtataattcaaactgtcaacccccactttgaactaacatct
agagctggtaaaaaatttgatcgtcgtgacatacagattgttgacgattctggatttgct
atttccgtgggtctatggaatcaacaagcgctcgatttcaatttaccagagggctctgtg
gtagctatcaagggtgttagggtatcagattttgggggtaagtcgctatctatgggtttt
aatagcaccttaattgccaatcctgaaattccagaagcttataaattaaagggatggtac
gatcagcaaggtaaagatcaagactttacatcattgaaacaagatgcaggagcaggaaca
acttctgcagcaaacttagcaaaattcattagtcagcgtataacgattgccagagcagag
gctgaaaaccttggaaagaatgaacgtggtgacttttttagtgttaaggcagctatcagt
tttatgaaggtagacaactttgcttatcctgcttgttctaatgaaaattgtaacaaaaaa
gtcattgaacaacccgatggtacatggagatgtgagaagtgtgatattaataacccatct
ccaaggtggagatacattttaacaatttctataatagatgaaactggtaacctatggtta
acattatttgatgaccaagctaaacagttactaggagttgatgcaaacactctcatgtcc
ctgaaagaaaatgacccagatgaattcacaagaactactcaaaatgttcaaatgaatcag
tatgactttagaattcgtgctcgtgaagataactacaacgatcaaactagaattagatat
acagttgccaacttgcataagttgaacttcaaggctgaggcagactacttggccgacgaa
ttaaccaaagtattccttacataa
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