KEGG   Nakaseomyces glabratus: 2888769
Entry
2888769           CDS       T01024                                 
Symbol
GVI51_H07117
Name
(RefSeq) uncharacterized protein
  KO
K03679  exosome complex component RRP4
Organism
cgr  Nakaseomyces glabratus
Pathway
cgr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cgr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    2888769 (GVI51_H07117)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cgr03019]
    2888769 (GVI51_H07117)
Messenger RNA biogenesis [BR:cgr03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     2888769 (GVI51_H07117)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     2888769 (GVI51_H07117)
SSDB
Motif
Pfam: RRP4_S1 ECR1_N KH_6 ECR1_N_2 RRP40_S1 Rrn7_cyclin_N
Other DBs
NCBI-GeneID: 2888769
NCBI-ProteinID: XP_447110
UniProt: Q6FRN4
LinkDB
Position
H:712423..713532
AA seq 369 aa
MSSVISVVKRTGGFQSNSIESDFESDEDMSYGSDVEEGQDADGDMEMKEEKGKGNSDIVT
PGELITDDPVWMRGHGTYFLDNMTYSSVAGTVSRVNRLLSVIPLRGRYAPETGDHIIGRI
AEVGNKRWKVDIGSKQHAVLMLGSVNLPGGILRRKSESDELQMRSFLKEGDLLNAEVQSL
FQDGSASLHTRSLKYGKLRDGIFCQVPSSLIIRSKNHTHNLPGNVTVLLGVNGFVWLRKT
SKMDLTRDAPPGGSTGAGRESSVGPTGATHVNTNTNISITRLEEESSWQIYSDENDPTIK
NSERKTISRYANVIKALAFCEIGITQERIISAYEASMAFPNIGSLIEKETMESIGRDVIT
VERMRGTEQ
NT seq 1110 nt   +upstreamnt  +downstreamnt
atgtcttctgttatctcagtggttaaaagaaccggtggattccagagcaactcgattgaa
agtgattttgagagcgatgaggacatgtcctatggcagcgatgttgaagaaggtcaagat
gccgacggagatatggagatgaaagaggagaaaggaaagggtaattcagatatagttaca
cctggtgagttgatcactgatgatccggtgtggatgagaggtcatggtacctattttctt
gataatatgacatactcttctgtggcaggtactgtctctcgagtaaataggttgttatct
gtgatccctttgagaggtaggtatgctccagaaactggtgaccacatcatcggtagaata
gctgaagttggtaataaaaggtggaaggtagatataggtagtaagcagcatgctgtcctg
atgctagggtctgtgaatctacctggtggtatattaagaagaaaatcagagagtgatgag
ttacagatgagatcatttctgaaagaaggtgatcttcttaatgcagaagttcaatctttg
ttccaagatggtagtgcgtctctacatacaagatcgctaaaatacggtaagctaagagat
ggtatcttctgtcaggttccaagctctctaattataagatcaaagaatcatacacacaat
ctaccgggaaatgttaccgtacttttaggtgttaatggatttgtatggttgagaaaaaca
tcaaaaatggatcttacaagagatgcaccaccaggtggcagtactggtgctggaagagaa
tcatctgtcggtccaactggtgctacacatgtcaacacaaacacaaacatttctattaca
agattagaggaagaatcatcatggcaaatatattctgatgaaaacgatccgacaataaag
aatagtgaaagaaagactatatctagatatgccaatgtaataaaagctttggctttttgt
gagataggtattacacaggaaagaatcattagtgcatatgaggcaagtatggctttccca
aatattggttcattaatagaaaaggaaacgatggaatcaataggtagagatgtaataaca
gtagagagaatgagaggtactgaacaataa

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