Nakaseomyces glabratus: 2888769
Help
Entry
2888769 CDS
T01024
Symbol
GVI51_H07117
Name
(RefSeq) uncharacterized protein
KO
K03679
exosome complex component RRP4
Organism
cgr
Nakaseomyces glabratus
Pathway
cgr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cgr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
2888769 (GVI51_H07117)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgr03019
]
2888769 (GVI51_H07117)
Messenger RNA biogenesis [BR:
cgr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
2888769 (GVI51_H07117)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
2888769 (GVI51_H07117)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
ECR1_N
KH_6
ECR1_N_2
RRP40_S1
Rrn7_cyclin_N
Motif
Other DBs
NCBI-GeneID:
2888769
NCBI-ProteinID:
XP_447110
UniProt:
Q6FRN4
LinkDB
All DBs
Position
H:712423..713532
Genome browser
AA seq
369 aa
AA seq
DB search
MSSVISVVKRTGGFQSNSIESDFESDEDMSYGSDVEEGQDADGDMEMKEEKGKGNSDIVT
PGELITDDPVWMRGHGTYFLDNMTYSSVAGTVSRVNRLLSVIPLRGRYAPETGDHIIGRI
AEVGNKRWKVDIGSKQHAVLMLGSVNLPGGILRRKSESDELQMRSFLKEGDLLNAEVQSL
FQDGSASLHTRSLKYGKLRDGIFCQVPSSLIIRSKNHTHNLPGNVTVLLGVNGFVWLRKT
SKMDLTRDAPPGGSTGAGRESSVGPTGATHVNTNTNISITRLEEESSWQIYSDENDPTIK
NSERKTISRYANVIKALAFCEIGITQERIISAYEASMAFPNIGSLIEKETMESIGRDVIT
VERMRGTEQ
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgttatctcagtggttaaaagaaccggtggattccagagcaactcgattgaa
agtgattttgagagcgatgaggacatgtcctatggcagcgatgttgaagaaggtcaagat
gccgacggagatatggagatgaaagaggagaaaggaaagggtaattcagatatagttaca
cctggtgagttgatcactgatgatccggtgtggatgagaggtcatggtacctattttctt
gataatatgacatactcttctgtggcaggtactgtctctcgagtaaataggttgttatct
gtgatccctttgagaggtaggtatgctccagaaactggtgaccacatcatcggtagaata
gctgaagttggtaataaaaggtggaaggtagatataggtagtaagcagcatgctgtcctg
atgctagggtctgtgaatctacctggtggtatattaagaagaaaatcagagagtgatgag
ttacagatgagatcatttctgaaagaaggtgatcttcttaatgcagaagttcaatctttg
ttccaagatggtagtgcgtctctacatacaagatcgctaaaatacggtaagctaagagat
ggtatcttctgtcaggttccaagctctctaattataagatcaaagaatcatacacacaat
ctaccgggaaatgttaccgtacttttaggtgttaatggatttgtatggttgagaaaaaca
tcaaaaatggatcttacaagagatgcaccaccaggtggcagtactggtgctggaagagaa
tcatctgtcggtccaactggtgctacacatgtcaacacaaacacaaacatttctattaca
agattagaggaagaatcatcatggcaaatatattctgatgaaaacgatccgacaataaag
aatagtgaaagaaagactatatctagatatgccaatgtaataaaagctttggctttttgt
gagataggtattacacaggaaagaatcattagtgcatatgaggcaagtatggctttccca
aatattggttcattaatagaaaaggaaacgatggaatcaataggtagagatgtaataaca
gtagagagaatgagaggtactgaacaataa
DBGET
integrated database retrieval system