Nakaseomyces glabratus: 2888907
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Entry
2888907 CDS
T01024
Symbol
GVI51_H02805
Name
(RefSeq) uncharacterized protein
KO
K12571
PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:
3.1.13.4
]
Organism
cgr
Nakaseomyces glabratus
Pathway
cgr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cgr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
2888907 (GVI51_H02805)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgr03019
]
2888907 (GVI51_H02805)
Enzymes [BR:
cgr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
2888907 (GVI51_H02805)
Messenger RNA biogenesis [BR:
cgr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
2888907 (GVI51_H02805)
mRNA degradation factors
3'-5' decay
Pan complex
2888907 (GVI51_H02805)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH_1
RNase_T
UCH
PAN2_N
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_WDR3_1st
WDR55
Beta-prop_WDR5
Motif
Other DBs
NCBI-GeneID:
2888907
NCBI-ProteinID:
XP_446924
UniProt:
Q6FS70
LinkDB
All DBs
Position
H:complement(285073..288354)
Genome browser
AA seq
1093 aa
AA seq
DB search
MNNWQHSFNNARPLDEHLHKPYLQYDGIEKHLTKFIFDDHANLVWTGDTYGCVSSYDVNF
QPYVRQRAHIGGSPVKDLMSHSSGVLSLSSDSLHLQDRRGTTLLNLTNIDIAAFNDLQTM
CYMSADQTSKVYCAGTDIGTGLSLIDLQRGTLETNIPYFSKVNFIKSSKKLAAIGKLSGS
IDLFDPGSNQVIKSFISHSSCITSMDIQDYTLVTTGQSNGFYNTFADPFVNVYDLRTMRQ
LPPISFSKSTSMGTVGADFVQLHPVLPTIVMIASSSGAFDFVDMANPSLRTQFANPGNGI
KCIRLSSNGDHLGVLESNDMFSTWKRPNSSVNFTNMPELLTYPSYPNDGPLANISIDDYN
YPLSTVGMPYYQEKLLSTWSTVIFRSPGTVPRDIDKILTDLKNSKKSKKLVADGVNFYPY
SVAKYGHKDALQPYISLRDKRYQRSTGSVPDDVLITKSVDGELPPAFKNLPLVVTKYATD
SFDFESVNKTPYCGLDNDVDNPFTNALIQLYRFIPEISNFLISTLKHEHFESPLLTDMAY
LFDMMRNTIDGICRTTNYQMSLNDVLEKNNLSLHTISESNMLQKINSLSLNDDGGKKQLS
IQELNDFLLSELCEEEVKFIDQNFVLQHCYCCEFAVKTKGCMTYGQTSGSLYKPSITIGP
NACTQKNGKVSYPHSILGYIEHGLKNSIVLNKKCEQCGIKENLEEDISIQELPPILSLSL
EFDDNAMKLAKTTKNWLPKEFYASIMKNKPLVRGSVNDIRTNTMIYKYELHGYIARISDP
DRGDHYVTFSRIYNEESKMFRWYLFNDYLVTEVDESIVYDLGKHWLKPEVVIYGDAEELR
KPFNYLKDVEIDDSILYKDYFSAAIRESIQKEYELLTRNEAPRPGSLIAIDAEFVTLKNE
KYDIDCRGAKTVVQSKVSALARISVVRGNEEQFGVPFIDDYIIIEKNIDDYLTKFSGILP
GDLDPKTSNKHLVPRNVAYRKIWLLMQLGCTFIGHGLQNDFKHINISVPKEQIRDTAVYF
LQGKRYLSLRYLAYVLLDINVQEGNHDSIEDAYTALVLYKKYLELKSNGMMDQVLNKLYE
EGRTTNYKVPLKL
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgaataactggcagcattctttcaataatgcccgaccattggatgagcatttacataag
ccatacttacagtatgatggtatagaaaagcatttaacaaaattcatatttgatgaccat
gctaatttggtatggactggtgatacttatggttgtgtttcatcatatgatgttaatttc
caaccgtatgtgagacagagagctcacattggaggctctcctgttaaagatctcatgagt
catagcagtggagttctctcattaagttcagactctttacatttacaggatagaagaggt
accacgctattaaatttaaccaatatagatattgctgctttcaacgatttacaaactatg
tgttatatgtcagctgatcagacatcaaaagtatactgtgcaggtacagacataggaaca
ggtttatcactaatagatttgcaacgaggaactttagagacaaacataccgtatttttca
aaagtaaatttcattaagtcaagcaagaaattagctgcaataggtaaattatcaggatca
attgacttgtttgatcctggaagcaatcaagtaataaagtcatttatttcgcattcatca
tgcattacctcaatggatatacaagattatacattggttaccactggtcaatcaaatggt
ttttacaatacatttgcagatccatttgtaaatgtatatgatctaaggacgatgagacaa
ttaccacccatatcattctctaaaagcactagcatgggaactgttggtgctgactttgtt
caactgcatcctgtgcttccaactattgttatgatcgcttcttcttccggggcatttgat
tttgtagacatggccaatcctagcttgaggacgcaatttgctaatcctgggaacggaatc
aaatgcattcgcttatcttctaatggtgatcatctgggtgtattagaatcaaacgatatg
tttagtacatggaaaagacctaatagttcagtaaattttacaaatatgccagagctttta
acatacccttcatatccaaatgatggacccttggccaatattagtatcgatgattataat
tatccattgagcaccgttggtatgccttactatcaagaaaagttattatctacttggtct
actgtcatatttagatctccaggcacagtacctagagatatagataagatactaactgat
ttaaagaacagcaaaaaatcaaagaagctagttgctgacggtgttaatttctatccttat
agtgttgctaaatacggacataaagatgccttacaaccatatatatcattgagggataag
cgttatcagaggtcaactggttctgttccagatgatgtgcttattacaaagagtgttgat
ggagaacttccgccagctttcaaaaatctgccattggttgtcacaaagtatgcaacagat
tcctttgatttcgaatcagttaataagacaccgtattgtggattagacaatgatgtagac
aaccctttcactaatgctctgattcaactatatagatttattccggagatctccaacttc
ttgataagtacgttgaaacatgagcatttcgagtcacctttgcttaccgatatggcatat
ttatttgatatgatgagaaatacaattgatggtatttgcaggacgaccaattatcagatg
tctctaaatgatgttttggagaagaacaatctttcccttcatacaatctcagagtccaat
atgctacaaaaaattaattcactatcgctgaatgacgatgggggcaagaagcaactttcc
attcaagaacttaatgactttttattgagtgaattatgtgaggaggaggttaaatttatc
gatcaaaactttgttctgcagcattgttattgctgtgaatttgcagtaaaaaccaaaggc
tgtatgacttacggtcaaacatctggtagtctgtacaagccatcgattaccatagggcca
aatgcgtgcactcaaaagaacggtaaagtatcctatcctcattcaatattgggatatatt
gagcatggtttaaaaaatagcatagtgctgaataagaagtgtgaacaatgtggaataaaa
gaaaatttggaggaagatattagtatacaagaattgccaccaattctctccctttctcta
gaattcgatgacaacgcaatgaaattagcaaagacgactaaaaattggctacctaaagaa
ttttatgcttctattatgaaaaacaaaccgttagtaagagggtctgttaatgatataagg
acaaatactatgatctacaaatatgaactacatggttatattgcgcgtatttccgacccg
gatagaggtgatcattatgttacattttcaagaatttataatgaagaatctaagatgttt
aggtggtacctctttaatgactatttggtcactgaagttgatgaatcgatagtgtatgat
ctaggaaagcattggttaaaacctgaggtggtaatttatggagatgcagaagaattgaga
aagccctttaattatctaaaagatgtagaaattgatgattcgattctttataaagactac
ttttctgctgccattagagaatcgatccaaaaagagtatgagctgcttaccagaaatgag
gcaccaaggccgggatccttgattgctattgatgctgagtttgttacattgaagaatgaa
aaatatgatattgattgtcgaggagcaaaaacagtagttcagtcaaaagtaagtgcccta
gcaaggatatccgttgttagaggtaatgaagaacaatttggtgtcccatttatagatgat
tatatcataattgagaagaatattgatgattatctgacaaaatttagtggtatattgcca
ggtgatctagatccaaaaactagcaataagcatttggtgcctagaaatgttgcctataga
aagatttggctactaatgcaactgggttgtacattcattggtcatggtcttcaaaatgac
ttcaaacatataaatatttctgtgccgaaagaacaaatacgtgatactgcagtatatttc
ctacaaggtaaacgttatttatcgttaaggtatctagcatatgtgttgttggacataaat
gtacaagaaggaaatcatgattcaatcgaagacgcttacactgctcttgttctgtacaag
aagtatcttgaactcaagagcaatggcatgatggatcaagtgttgaacaagctatatgaa
gaaggaagaactactaattacaaggtacctttgaagctatag
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