Nakaseomyces glabratus: 2889175
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Entry
2889175 CDS
T01024
Symbol
GVI51_I03135
Name
(RefSeq) uncharacterized protein
KO
K10747
DNA ligase 1 [EC:
6.5.1.1
6.5.1.6
6.5.1.7
]
Organism
cgr
Nakaseomyces glabratus
Pathway
cgr03030
DNA replication
cgr03410
Base excision repair
cgr03420
Nucleotide excision repair
cgr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cgr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
2889175 (GVI51_I03135)
03410 Base excision repair
2889175 (GVI51_I03135)
03420 Nucleotide excision repair
2889175 (GVI51_I03135)
03430 Mismatch repair
2889175 (GVI51_I03135)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cgr03032
]
2889175 (GVI51_I03135)
03400 DNA repair and recombination proteins [BR:
cgr03400
]
2889175 (GVI51_I03135)
Enzymes [BR:
cgr01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
2889175 (GVI51_I03135)
6.5.1.6 DNA ligase (ATP or NAD+)
2889175 (GVI51_I03135)
6.5.1.7 DNA ligase (ATP, ADP or GTP)
2889175 (GVI51_I03135)
DNA replication proteins [BR:
cgr03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
2889175 (GVI51_I03135)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
2889175 (GVI51_I03135)
DNA repair and recombination proteins [BR:
cgr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
2889175 (GVI51_I03135)
NER (nucleotide excision repair)
Other NER factors
2889175 (GVI51_I03135)
MMR (mismatch excision repair)
Other MMR factors
2889175 (GVI51_I03135)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
RNA_ligase
Motif
Other DBs
NCBI-GeneID:
2889175
NCBI-ProteinID:
XP_447396
UniProt:
Q6FQU8
LinkDB
All DBs
Position
I:complement(291290..293464)
Genome browser
AA seq
724 aa
AA seq
DB search
MFSRLAPPIRFISARIIKEPTRPLIVMKRQATLARFFSSVKKDADGDKKGEQADVKTAAV
DLNSHEVDANKSPLKKMKLESTGSLTATKNGNQGKEEHEGTPIASTPRQVDSKFFCKVPY
SDLCNLFEEIEGTSSRLAIIKLCSDFFIKIMKEDPQNLIPVTYLFINKLGPDYEPGLELG
LGENLLMKTISESCGKSMQQIKNQYREIGDLGQIALEARNVQPTMFKPKPLVVGEVFENL
KTIAKSQGKDSQTKKMKLIKRMLTACQGTEAKFLIRSLESKLRIGLAEKTVLIALSKALL
IHDEKYSNKEPSMDVVEQAEQKIRDAFCQVPNYELVINACLDYGIMKLDEHCTIQPGIPL
KPMLAKPTKAINEVLDRFQGQTFTSEYKYDGERAQVHLLKDGTMRIYSRNGENMTERYPE
IQIKDFLADPASTTSLILDCEAVAWDKEQNKILPFQVLTTRKRKDVNINEVKVRVCLFAF
DILLHNDMRLINEPLSKRREVLHEVTKPVEGEFQYATQMTTSNLDELQKFLDESVKNSCE
GLMVKMMDGVESYYEPSKRSRNWLKLKKDYLEGVGDSLDLCVLGAYFGRGKRTGTYGGFL
LGCYNADSEDFETCCKIGTGFSEEMLQTLYEKLSPTVIDGPKGTYVFDSSAEPDVWFEPT
MLFEVLTADLSLSPIYKAGSSVYDKGISLRFPRFLRIRDDKSVEDATSSEQIIEMYQNQS
HVAN
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgttttcaaggttggcaccacctatccgttttatcagtgcaagaattataaaggagcct
acgagaccattgattgtgatgaaaagacaagctacgttggccaggtttttcagttctgtg
aagaaggacgccgatggggacaagaaaggtgagcaagctgatgtgaagaccgcagcggtc
gatttgaacagtcatgaagtggacgcgaacaagagtcccttaaagaagatgaagctggag
tccacaggttctctgacagctacgaagaacggcaatcagggcaaggaagagcacgaaggt
actccgattgcaagcactcctcgccaagttgactctaagtttttttgcaaggtgccttat
tctgacttgtgtaacttgtttgaggagatcgagggcacttcttcccgtttggcaattatc
aagctatgttctgacttcttcatcaagataatgaaggaggacccacagaatcttatccca
gtgacgtacttgtttattaacaaactgggccccgactatgagcctgggttggaattgggt
ttaggtgaaaatctgctgatgaagacaattagtgaatcatgcggtaaatcaatgcaacag
ataaaaaaccagtacagagaaattggtgatctcggtcaaattgctctcgaggccagaaat
gtgcaacctacaatgttcaaacctaagccactggtagtgggtgaggtattcgaaaacctg
aagactatcgcaaagtctcaaggtaaagattctcagacaaagaagatgaaactgattaaa
agaatgttgacagcgtgtcaaggtactgaggcaaaattcttgatcagatctctggaatcg
aagttaagaattggtctggctgaaaaaaccgttttaattgcactttcgaaggcattactg
atacatgacgagaaatacagcaataaagagccctcgatggacgttgtcgaacaagctgag
caaaagattcgagacgcattttgtcaagttccaaactatgaattggttattaatgcatgc
ttagattacggcattatgaaacttgatgaacattgtactatacaacctggtatcccatta
aaacctatgcttgcaaagcctacaaaggcaattaatgaagtgttagatagatttcaagga
caaacttttacatcggaatataaatacgatggtgaaagagctcaagttcatttgctaaaa
gatggtaccatgagaatttactccagaaatggtgaaaacatgactgaaagatatccagaa
attcaaatcaaggattttttggcagatccggcatcaactacatcattaattcttgattgt
gaagcagtcgcttgggataaagaacaaaataaaatactaccatttcaagtcttgaccaca
agaaaaaggaaggatgttaatattaatgaggtgaaagttcgtgtgtgtctgtttgctttc
gatattttattgcataatgacatgcgcctgataaatgagccactgagtaaaaggcgggag
gtattgcatgaggtaacaaaaccagttgaaggtgaattccaatatgcaacacagatgacc
actagtaatcttgacgaattacagaaattcttagacgaatcagttaaaaattcttgtgaa
ggtttgatggttaagatgatggatggtgttgagtcatattacgaaccaagtaaacgttcg
agaaattggttgaaattgaaaaaggactatcttgaaggtgttggtgattctctagattta
tgtgtgttaggggcctattttggtagaggtaaaagaacgggtacctatggtggtttttta
cttggttgttataatgctgacagtgaggattttgagacttgttgtaaaataggtacaggt
ttttcggaagaaatgctacaaacactatatgaaaagctatcgcccactgttattgatggc
ccaaaaggtacgtatgtgtttgactcaagtgcagaaccggacgtatggtttgaaccaaca
atgctattcgaagtattgactgctgatctgtcactatcaccaatctacaaagcaggtagc
tctgtttatgataagggtatatccttgagatttccgcgttttctaagaatcagagatgat
aaatctgttgaggacgctacatcatcagaacagatcatagaaatgtaccaaaatcaaagt
catgtagctaattaa
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