KEGG   Nakaseomyces glabratus: 2889800
Entry
2889800           CDS       T01024                                 
Symbol
GVI51_J05467
Name
(RefSeq) uncharacterized protein
  KO
K12879  THO complex subunit 2
Organism
cgr  Nakaseomyces glabratus
Pathway
cgr03013  Nucleocytoplasmic transport
cgr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cgr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    2889800 (GVI51_J05467)
  09122 Translation
   03013 Nucleocytoplasmic transport
    2889800 (GVI51_J05467)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cgr03019]
    2889800 (GVI51_J05467)
   03041 Spliceosome [BR:cgr03041]
    2889800 (GVI51_J05467)
Messenger RNA biogenesis [BR:cgr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     2889800 (GVI51_J05467)
Spliceosome [BR:cgr03041]
 Complex C
  Other components
   EJC/TREX
    2889800 (GVI51_J05467)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    2889800 (GVI51_J05467)
SSDB
Motif
Pfam: THOC2_N Tho2 Thoc2 crAss_THA
Other DBs
NCBI-GeneID: 2889800
NCBI-ProteinID: XP_447951
UniProt: Q6FP93
LinkDB
Position
J:585371..590077
AA seq 1568 aa
MTNVLGRLKRLSGQVNDNYFTTRTILTDEFASSWNSKREELIDNYKKLDNDSERKEWLRS
FFMDVIRLLKLSEDNNSLQIDTLSELIKLVYNATPSFKQTIGEVFAAVVNTYCPKSVIDK
VLRLITLTPILRTEVYKYSWLSTKLMTNDQKILTKHLLKKNRYEIKKYNLIYENPIGFTQ
ITSLLNVLVLDPYAHQKIPYFVSQLYQIMGKYSLDPLRTLDVMITFFAEHVTLHYKLILD
FLKCTNYWPRDTQLANPDNIMSLNHGGNKTAAKLITVRLNSFFQSAVEGKSISSFEDNYL
NLSCLLIKEGFVNFSNIWSNLSPLSEEFKSTLDDYMKKLELESTKGLDNPLAMASALTNE
DDEADNKELDNKDSDTTMTGTEEEDKELEEAQKRNFEAAVLNHGKLKLLIKLLAHGTYAP
TLWAISEFPEISHLDTDIPILFSKLFEIQIENLYESMSFRWRNTPAIISGLKKLENGLLS
SKPRLYETIYSDDTNECVELNTKRKFYYQDWSSGLPRIADINELVDVCHQYFKYFDVSLG
CNSSLIIKLCRIVSAKLRGTEVDGTDQSQTLELAINYTRKFLLPIVGVMSENSTLGSEIF
NLLKEFPLEKRYFMYNEMLTKTSQDNLLVKIGFNKAEREAKSILKSLSTDNIETGSRKFA
RLLSSNPLATLLPTIKQIENYDKVSELIIFTTKFLNQFGYDVLQYILLLRLTYSRPIMQD
DGINQSMWVQRLAVFIAGLVKSCPQMDISELITYIIKQLHVGSSIAITIMKELISTVAGI
RDLNHVSRERLILINSSRPLQKYGHKLIFDVRNENKSLGMKLMTLFQNQDAVSEIIVLLY
NLNLNINQQDLHYKILSSKCDEMNTLLWSYIELVKYSNTHDNFPKYVYPFERLINEFHIS
TPWAFHIWRDYFKEEDEISGDLSNFSSYEKIDFPELSASNFDRSFFLTFWRLSLLHVQFD
KNLYNTRKKEIESEIVPGLTNRQKNQKVGEKKEIMSSCITHEHIFIKTKKYLCENSSSWG
NSLDLDNQHIFIKFCIVPRILFSPSDALFTSRFLIETFGNELLFSLMDTFIKSRMMHALI
FCSTISEAANLGIFFADLFEYLEKARISGKLTDDLTATLYNWHDVLVEESIILLKERNYM
SIRNGIEFLRNVSDIFPVVDIHIKLCCQALRDILEAETREDIKLPTNALLGHLNSKLKSS
IRKSEYCQLTEDEKLLEEKYNEELNEIKDYETSLENEKKQAELRAKIEENKQKRLEAEKQ
KAELQKQQQVESSRETRVSEAKLKQKGQSHTWRLTKLFRVMDDVCYFISRNELNRAINLV
EDDSEVWNIKHAIKNKGSLGSFRNNIFEIFGRYFKSLILYPQNSDFQVRMDELKAATKYL
DRKSNDVEPEKSSRYGGSVKVPPGASAKSEDLRGRSTTPSGPASDKNKQSSNQFRQAPGR
NTYNNDRQHSGHSYKTGKDDKEKTPQQRSQLQFPDRPTQGRNDHQIAGQKRGYQSQQKDS
HDDHASKRFRKEDSSRMSYTDRNNRSFNQNLASRFGGPTNKNSNASSDHKPTALPQGPKG
SSGSRYQR
NT seq 4707 nt   +upstreamnt  +downstreamnt
atgactaatgttctgggacgtttaaagcgtctttctggacaggttaacgacaactacttc
accaccagaactattttgaccgatgaatttgcatccagttggaatagcaaaagggaggaa
ttgattgataattacaaaaaattggataacgattctgagaggaaagaatggctgcgatct
tttttcatggatgttattagattgttgaaactgtctgaagataacaattctctacaaatt
gatactttatctgaactcatcaaactggtatataatgccactccgtcttttaagcaaact
ataggtgaagtgtttgctgcagtggtaaatacatattgtccgaagtcggtaattgacaaa
gttttgaggttgattactttaacgccaattcttcgcactgaagtatataaatacagctgg
ttgtcgacaaagttaatgaccaacgaccaaaagatactaacaaaacacctactaaaaaaa
aataggtatgaaatcaaaaaatataacttgatatatgaaaatccaattggttttacgcaa
ataacatcgctattaaatgtactggtcctagatccttatgcacatcaaaaaattccatac
ttcgtttcacagctatatcagataatgggaaaatactcattggacccattgagaacccta
gatgtaatgataacgttttttgcagagcatgtaactcttcattataaactaatactcgat
tttctgaaatgtacaaactactggccaagggatactcaacttgccaatcctgataacatc
atgagtttaaaccacggtggtaacaaaacagctgccaaattgattactgtaaggttgaat
tctttctttcaatcggcggttgaaggaaaatctatttcttcgttcgaggacaattatctt
aacctcagttgcttactcataaaagaaggatttgtaaatttttcaaatatatggagtaat
ttaagtccattaagtgaagagttcaagagcaccttagatgattatatgaaaaaacttgag
ttggagtctacaaaagggttagataatccgttagctatggcttctgctttgaccaacgag
gatgacgaggctgataacaaagaattagacaacaaagattctgatacaactatgacaggt
acagaagaagaagataaggaacttgaggaagcacagaaacgaaattttgaagcggctgta
ttgaatcacggcaaactcaagcttcttataaaacttttagctcatggaacttatgcacca
actttatgggccattagtgagtttccagaaatttctcatttagatacagatattccaatc
ttgttttcaaagctattcgaaatacaaatagagaacctctatgagagcatgtcgttcagg
tggcgtaatactcctgccataatctcaggactaaaaaagctggaaaatggcctcttgtct
tctaagccaagattatatgaaacaatatactcagatgataccaacgagtgtgtagagctg
aatactaagagaaaattctactatcaagattggtcatctggcttaccaagaatagctgac
atcaatgaattggtagatgtgtgtcaccagtatttcaagtactttgatgtctcattagga
tgcaatagcagcttaataataaagctttgtcggattgtatctgcaaagttaagaggaacc
gaagttgatgggactgatcaatctcagacactcgaattagctataaattatacccgtaaa
tttcttttgcctattgtaggtgtgatgagcgaaaattccactcttgggagtgagatattt
aatcttttgaaggaatttccattggaaaaaaggtacttcatgtacaatgaaatgttaact
aagacatcgcaggataatcttctcgtaaagatcggatttaataaagctgaaagggaagct
aagtcaattctgaaatctttgagtacagataatattgaaactggttccaggaaatttgca
agacttttatcatcaaatccacttgcaactttgctccccacgataaagcaaattgaaaac
tacgacaaagttagtgaattgataatctttacaacaaagttcttaaatcaatttggatac
gatgttcttcaatatattctacttcttcgtttaacatattctaggcccattatgcaagat
gatggtataaatcagtctatgtgggttcagagattggcagtatttattgctgggttagtc
aaaagttgtcctcaaatggatatctcggagcttatcacttatataatcaaacaattgcat
gttggaagttctattgcaatcacaattatgaaagagttaatttcgactgttgcaggtata
cgtgatttgaatcatgttagcagagaacgtctaatcttgatcaactcaagtagacctctt
caaaaatatggtcataagcttatatttgatgttagaaatgaaaataaatcattgggtatg
aaacttatgactttattccaaaatcaagatgctgtttctgaaattattgttttgctatac
aatctcaatttgaatattaatcaacaagatctgcattacaaaattctctcctccaaatgc
gatgagatgaatacgttattatggtcttacatagagcttgtaaaatacagtaatactcat
gacaactttccaaaatatgtttaccctttcgaaagactgattaatgagtttcacatttcc
acaccatgggcattccatatctggagagattattttaaggaagaggatgaaatatctggg
gatctatcaaattttagtagctatgaaaaaatagatttcccagaactttcagcatcgaac
tttgacagaagcttctttctgacattttggagactatctcttttacatgttcaatttgat
aagaatctttataataccagaaaaaaggaaattgaaagtgaaatagttccaggattgact
aacagacaaaaaaatcaaaaagtaggtgagaagaaggaaataatgtcaagttgtattact
catgaacatatctttatcaaaaccaaaaaatatttatgtgaaaattcatctagctggggt
aatagcttggacttagataaccagcacattttcattaaattctgtattgtgcctagaatt
ttattttctccttcggatgccttattcacctcaagatttttgatagaaacttttggtaat
gaattattattttccctcatggacacctttatcaaatcaagaatgatgcatgctttgata
ttttgttctactatttcggaggctgctaacttaggtatattttttgctgatttgtttgaa
tatttggaaaaagccagaatatctgggaaattgacagacgatctaacagctaccctttat
aattggcatgacgttcttgtagaagaatcaattatactgttgaaagaaagaaactatatg
tctattcgtaatggaattgaatttcttcgtaacgtttctgatatattccctgttgttgac
attcatatcaagttatgctgtcaggcattaagagacatattagaagctgaaactagagag
gacatcaaacttcctacaaatgctcttttaggtcacttaaactccaaattaaaatcgtcg
attagaaagagtgaatattgtcaattaacagaagatgaaaagcttctggaagagaaatat
aatgaggagctgaatgaaattaaggattatgaaactagcctagaaaatgagaaaaaacaa
gctgaattgagggcaaaaatagaagaaaataaacaaaagagattggaggctgagaagcag
aaagcagagttgcaaaaacaacagcaggttgaatcttccagagaaacaagagtgtcagaa
gcaaaactaaaacaaaaaggtcaatcccacacttggagattaaccaaactgtttagagtt
atggatgatgtttgctacttcatttcaagaaatgaattgaacagagctattaatcttgtt
gaagatgattctgaagtgtggaatattaagcatgctatcaagaataaaggctctctagga
agctttaggaataacatctttgaaatttttggacgctatttcaaatcgcttattttgtat
ccacaaaatagtgatttccaggtaagaatggacgaattgaaggcggcaaccaaatatttg
gatcgtaaatccaatgatgttgaacccgagaagagcagcagatacgggggctctgtaaag
gttcctcctggtgcatcagcaaagtcagaggacctgagaggacgctcaactacacccagt
gggccagcatcagataagaacaaacaaagttctaatcagttcagacaagcacctggtaga
aatacctacaataatgatagacaacatagtggtcatagctacaaaactggcaaggatgat
aaagaaaagactccccagcaacggtctcaacttcaattccctgaccgtccgactcaagga
agaaatgatcatcagattgctggtcagaaaagaggataccaatctcaacaaaaagacagt
catgatgaccatgctagcaaacggttcagaaaggaggactcctcacgcatgtcttacaca
gacagaaataatcgctcatttaatcagaatttggcttcaagattcgggggtcccacaaat
aaaaacagcaatgcctctagtgatcacaagccaacagcattgcctcaaggccccaaggga
tcaagtggcagcagataccaacgttaa

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