Nakaseomyces glabratus: 2889800
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Entry
2889800 CDS
T01024
Symbol
GVI51_J05467
Name
(RefSeq) uncharacterized protein
KO
K12879
THO complex subunit 2
Organism
cgr
Nakaseomyces glabratus
Pathway
cgr03013
Nucleocytoplasmic transport
cgr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cgr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
2889800 (GVI51_J05467)
09122 Translation
03013 Nucleocytoplasmic transport
2889800 (GVI51_J05467)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgr03019
]
2889800 (GVI51_J05467)
03041 Spliceosome [BR:
cgr03041
]
2889800 (GVI51_J05467)
Messenger RNA biogenesis [BR:
cgr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
2889800 (GVI51_J05467)
Spliceosome [BR:
cgr03041
]
Complex C
Other components
EJC/TREX
2889800 (GVI51_J05467)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
2889800 (GVI51_J05467)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
THOC2_N
Tho2
Thoc2
crAss_THA
Motif
Other DBs
NCBI-GeneID:
2889800
NCBI-ProteinID:
XP_447951
UniProt:
Q6FP93
LinkDB
All DBs
Position
J:585371..590077
Genome browser
AA seq
1568 aa
AA seq
DB search
MTNVLGRLKRLSGQVNDNYFTTRTILTDEFASSWNSKREELIDNYKKLDNDSERKEWLRS
FFMDVIRLLKLSEDNNSLQIDTLSELIKLVYNATPSFKQTIGEVFAAVVNTYCPKSVIDK
VLRLITLTPILRTEVYKYSWLSTKLMTNDQKILTKHLLKKNRYEIKKYNLIYENPIGFTQ
ITSLLNVLVLDPYAHQKIPYFVSQLYQIMGKYSLDPLRTLDVMITFFAEHVTLHYKLILD
FLKCTNYWPRDTQLANPDNIMSLNHGGNKTAAKLITVRLNSFFQSAVEGKSISSFEDNYL
NLSCLLIKEGFVNFSNIWSNLSPLSEEFKSTLDDYMKKLELESTKGLDNPLAMASALTNE
DDEADNKELDNKDSDTTMTGTEEEDKELEEAQKRNFEAAVLNHGKLKLLIKLLAHGTYAP
TLWAISEFPEISHLDTDIPILFSKLFEIQIENLYESMSFRWRNTPAIISGLKKLENGLLS
SKPRLYETIYSDDTNECVELNTKRKFYYQDWSSGLPRIADINELVDVCHQYFKYFDVSLG
CNSSLIIKLCRIVSAKLRGTEVDGTDQSQTLELAINYTRKFLLPIVGVMSENSTLGSEIF
NLLKEFPLEKRYFMYNEMLTKTSQDNLLVKIGFNKAEREAKSILKSLSTDNIETGSRKFA
RLLSSNPLATLLPTIKQIENYDKVSELIIFTTKFLNQFGYDVLQYILLLRLTYSRPIMQD
DGINQSMWVQRLAVFIAGLVKSCPQMDISELITYIIKQLHVGSSIAITIMKELISTVAGI
RDLNHVSRERLILINSSRPLQKYGHKLIFDVRNENKSLGMKLMTLFQNQDAVSEIIVLLY
NLNLNINQQDLHYKILSSKCDEMNTLLWSYIELVKYSNTHDNFPKYVYPFERLINEFHIS
TPWAFHIWRDYFKEEDEISGDLSNFSSYEKIDFPELSASNFDRSFFLTFWRLSLLHVQFD
KNLYNTRKKEIESEIVPGLTNRQKNQKVGEKKEIMSSCITHEHIFIKTKKYLCENSSSWG
NSLDLDNQHIFIKFCIVPRILFSPSDALFTSRFLIETFGNELLFSLMDTFIKSRMMHALI
FCSTISEAANLGIFFADLFEYLEKARISGKLTDDLTATLYNWHDVLVEESIILLKERNYM
SIRNGIEFLRNVSDIFPVVDIHIKLCCQALRDILEAETREDIKLPTNALLGHLNSKLKSS
IRKSEYCQLTEDEKLLEEKYNEELNEIKDYETSLENEKKQAELRAKIEENKQKRLEAEKQ
KAELQKQQQVESSRETRVSEAKLKQKGQSHTWRLTKLFRVMDDVCYFISRNELNRAINLV
EDDSEVWNIKHAIKNKGSLGSFRNNIFEIFGRYFKSLILYPQNSDFQVRMDELKAATKYL
DRKSNDVEPEKSSRYGGSVKVPPGASAKSEDLRGRSTTPSGPASDKNKQSSNQFRQAPGR
NTYNNDRQHSGHSYKTGKDDKEKTPQQRSQLQFPDRPTQGRNDHQIAGQKRGYQSQQKDS
HDDHASKRFRKEDSSRMSYTDRNNRSFNQNLASRFGGPTNKNSNASSDHKPTALPQGPKG
SSGSRYQR
NT seq
4707 nt
NT seq
+upstream
nt +downstream
nt
atgactaatgttctgggacgtttaaagcgtctttctggacaggttaacgacaactacttc
accaccagaactattttgaccgatgaatttgcatccagttggaatagcaaaagggaggaa
ttgattgataattacaaaaaattggataacgattctgagaggaaagaatggctgcgatct
tttttcatggatgttattagattgttgaaactgtctgaagataacaattctctacaaatt
gatactttatctgaactcatcaaactggtatataatgccactccgtcttttaagcaaact
ataggtgaagtgtttgctgcagtggtaaatacatattgtccgaagtcggtaattgacaaa
gttttgaggttgattactttaacgccaattcttcgcactgaagtatataaatacagctgg
ttgtcgacaaagttaatgaccaacgaccaaaagatactaacaaaacacctactaaaaaaa
aataggtatgaaatcaaaaaatataacttgatatatgaaaatccaattggttttacgcaa
ataacatcgctattaaatgtactggtcctagatccttatgcacatcaaaaaattccatac
ttcgtttcacagctatatcagataatgggaaaatactcattggacccattgagaacccta
gatgtaatgataacgttttttgcagagcatgtaactcttcattataaactaatactcgat
tttctgaaatgtacaaactactggccaagggatactcaacttgccaatcctgataacatc
atgagtttaaaccacggtggtaacaaaacagctgccaaattgattactgtaaggttgaat
tctttctttcaatcggcggttgaaggaaaatctatttcttcgttcgaggacaattatctt
aacctcagttgcttactcataaaagaaggatttgtaaatttttcaaatatatggagtaat
ttaagtccattaagtgaagagttcaagagcaccttagatgattatatgaaaaaacttgag
ttggagtctacaaaagggttagataatccgttagctatggcttctgctttgaccaacgag
gatgacgaggctgataacaaagaattagacaacaaagattctgatacaactatgacaggt
acagaagaagaagataaggaacttgaggaagcacagaaacgaaattttgaagcggctgta
ttgaatcacggcaaactcaagcttcttataaaacttttagctcatggaacttatgcacca
actttatgggccattagtgagtttccagaaatttctcatttagatacagatattccaatc
ttgttttcaaagctattcgaaatacaaatagagaacctctatgagagcatgtcgttcagg
tggcgtaatactcctgccataatctcaggactaaaaaagctggaaaatggcctcttgtct
tctaagccaagattatatgaaacaatatactcagatgataccaacgagtgtgtagagctg
aatactaagagaaaattctactatcaagattggtcatctggcttaccaagaatagctgac
atcaatgaattggtagatgtgtgtcaccagtatttcaagtactttgatgtctcattagga
tgcaatagcagcttaataataaagctttgtcggattgtatctgcaaagttaagaggaacc
gaagttgatgggactgatcaatctcagacactcgaattagctataaattatacccgtaaa
tttcttttgcctattgtaggtgtgatgagcgaaaattccactcttgggagtgagatattt
aatcttttgaaggaatttccattggaaaaaaggtacttcatgtacaatgaaatgttaact
aagacatcgcaggataatcttctcgtaaagatcggatttaataaagctgaaagggaagct
aagtcaattctgaaatctttgagtacagataatattgaaactggttccaggaaatttgca
agacttttatcatcaaatccacttgcaactttgctccccacgataaagcaaattgaaaac
tacgacaaagttagtgaattgataatctttacaacaaagttcttaaatcaatttggatac
gatgttcttcaatatattctacttcttcgtttaacatattctaggcccattatgcaagat
gatggtataaatcagtctatgtgggttcagagattggcagtatttattgctgggttagtc
aaaagttgtcctcaaatggatatctcggagcttatcacttatataatcaaacaattgcat
gttggaagttctattgcaatcacaattatgaaagagttaatttcgactgttgcaggtata
cgtgatttgaatcatgttagcagagaacgtctaatcttgatcaactcaagtagacctctt
caaaaatatggtcataagcttatatttgatgttagaaatgaaaataaatcattgggtatg
aaacttatgactttattccaaaatcaagatgctgtttctgaaattattgttttgctatac
aatctcaatttgaatattaatcaacaagatctgcattacaaaattctctcctccaaatgc
gatgagatgaatacgttattatggtcttacatagagcttgtaaaatacagtaatactcat
gacaactttccaaaatatgtttaccctttcgaaagactgattaatgagtttcacatttcc
acaccatgggcattccatatctggagagattattttaaggaagaggatgaaatatctggg
gatctatcaaattttagtagctatgaaaaaatagatttcccagaactttcagcatcgaac
tttgacagaagcttctttctgacattttggagactatctcttttacatgttcaatttgat
aagaatctttataataccagaaaaaaggaaattgaaagtgaaatagttccaggattgact
aacagacaaaaaaatcaaaaagtaggtgagaagaaggaaataatgtcaagttgtattact
catgaacatatctttatcaaaaccaaaaaatatttatgtgaaaattcatctagctggggt
aatagcttggacttagataaccagcacattttcattaaattctgtattgtgcctagaatt
ttattttctccttcggatgccttattcacctcaagatttttgatagaaacttttggtaat
gaattattattttccctcatggacacctttatcaaatcaagaatgatgcatgctttgata
ttttgttctactatttcggaggctgctaacttaggtatattttttgctgatttgtttgaa
tatttggaaaaagccagaatatctgggaaattgacagacgatctaacagctaccctttat
aattggcatgacgttcttgtagaagaatcaattatactgttgaaagaaagaaactatatg
tctattcgtaatggaattgaatttcttcgtaacgtttctgatatattccctgttgttgac
attcatatcaagttatgctgtcaggcattaagagacatattagaagctgaaactagagag
gacatcaaacttcctacaaatgctcttttaggtcacttaaactccaaattaaaatcgtcg
attagaaagagtgaatattgtcaattaacagaagatgaaaagcttctggaagagaaatat
aatgaggagctgaatgaaattaaggattatgaaactagcctagaaaatgagaaaaaacaa
gctgaattgagggcaaaaatagaagaaaataaacaaaagagattggaggctgagaagcag
aaagcagagttgcaaaaacaacagcaggttgaatcttccagagaaacaagagtgtcagaa
gcaaaactaaaacaaaaaggtcaatcccacacttggagattaaccaaactgtttagagtt
atggatgatgtttgctacttcatttcaagaaatgaattgaacagagctattaatcttgtt
gaagatgattctgaagtgtggaatattaagcatgctatcaagaataaaggctctctagga
agctttaggaataacatctttgaaatttttggacgctatttcaaatcgcttattttgtat
ccacaaaatagtgatttccaggtaagaatggacgaattgaaggcggcaaccaaatatttg
gatcgtaaatccaatgatgttgaacccgagaagagcagcagatacgggggctctgtaaag
gttcctcctggtgcatcagcaaagtcagaggacctgagaggacgctcaactacacccagt
gggccagcatcagataagaacaaacaaagttctaatcagttcagacaagcacctggtaga
aatacctacaataatgatagacaacatagtggtcatagctacaaaactggcaaggatgat
aaagaaaagactccccagcaacggtctcaacttcaattccctgaccgtccgactcaagga
agaaatgatcatcagattgctggtcagaaaagaggataccaatctcaacaaaaagacagt
catgatgaccatgctagcaaacggttcagaaaggaggactcctcacgcatgtcttacaca
gacagaaataatcgctcatttaatcagaatttggcttcaagattcgggggtcccacaaat
aaaaacagcaatgcctctagtgatcacaagccaacagcattgcctcaaggccccaaggga
tcaagtggcagcagataccaacgttaa
DBGET
integrated database retrieval system