Nakaseomyces glabratus: 2889805
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Entry
2889805 CDS
T01024
Symbol
GVI51_J05577
Name
(RefSeq) uncharacterized protein
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
cgr
Nakaseomyces glabratus
Pathway
cgr03018
RNA degradation
cgr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cgr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
2889805 (GVI51_J05577)
09123 Folding, sorting and degradation
03018 RNA degradation
2889805 (GVI51_J05577)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgr03019
]
2889805 (GVI51_J05577)
03041 Spliceosome [BR:
cgr03041
]
2889805 (GVI51_J05577)
Messenger RNA biogenesis [BR:
cgr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
2889805 (GVI51_J05577)
mRNA degradation factors
5'-3' decay
Lsm complex
2889805 (GVI51_J05577)
Spliceosome [BR:
cgr03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
2889805 (GVI51_J05577)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
TMEM51
CTD9
Hfq
SM-ATX
Motif
Other DBs
NCBI-GeneID:
2889805
NCBI-ProteinID:
XP_447956
UniProt:
Q6FP88
LinkDB
All DBs
Position
J:join(595333..595344,595512..595853)
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AA seq
117 aa
AA seq
DB search
MSEQNTQQAEQNNNNRGQQKKKFEAPKREAIVDLGKYKDSKVSVKLMGGRIVTGILKGYD
QLMNLVLEETEETLKPEVETGATQQVTRQLGLTVIRGTILISLSPLDGSEVLYIQTN
NT seq
354 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaacagaatactcaacaagcggaacagaataacaacaacagagggcagcaaaag
aagaagtttgaagctccaaagagagaggccattgtagatctaggtaaatataaagacagc
aaggtttcagtcaaactgatgggtggtagaatagtgacaggcattctaaagggttacgat
cagttgatgaatctcgtgcttgaagaaacagaagagacattgaaaccagaagtcgaaaca
ggtgctacccagcaagttacaaggcaattgggtctaactgtcataagaggaactatttta
atatccttgagcccactggatggctctgaggtgctttacattcaaactaactaa
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