KEGG   Nakaseomyces glabratus: 2889856
Entry
2889856           CDS       T01024                                 
Symbol
GVI51_J07711
Name
(RefSeq) uncharacterized protein
  KO
K12880  THO complex subunit 3
Organism
cgr  Nakaseomyces glabratus
Pathway
cgr03013  Nucleocytoplasmic transport
cgr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cgr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    2889856 (GVI51_J07711)
  09122 Translation
   03013 Nucleocytoplasmic transport
    2889856 (GVI51_J07711)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cgr03019]
    2889856 (GVI51_J07711)
   03041 Spliceosome [BR:cgr03041]
    2889856 (GVI51_J07711)
Messenger RNA biogenesis [BR:cgr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     2889856 (GVI51_J07711)
Spliceosome [BR:cgr03041]
 Complex C
  Other components
   EJC/TREX
    2889856 (GVI51_J07711)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    2889856 (GVI51_J07711)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st WD40_Prp19 Beta-prop_WDR5 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_WDR3_1st WD40 WDR55 ANAPC4_WD40 Beta-prop_WDR3_2nd Beta-prop_RIG_2nd EIF3I Beta-prop_WDR36-Utp21_1st Beta-prop_Aladin Beta-prop_EML Beta-prop_WDR36-Utp21_2nd WD40_Gbeta Pep3_Vps18 Beta-prop_VPS8 Beta-prop_HPS5 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_BBS7 Beta-prop_DCAF4 Beta-prop_NUP159_NUP214 ASA1 Beta-prop_SPT8 Beta-prop_IP5PC_F KNTC1_N WD40_RFWD3 Lactonase WDR93 Beta-prop_ELP1_2nd
Other DBs
NCBI-GeneID: 2889856
NCBI-ProteinID: XP_448049
UniProt: Q6FNZ5
LinkDB
Position
J:complement(812248..813546)
AA seq 432 aa
MPATAIDSFNNISSKSHEYVNVVENVAVKFLQSAFENEHINAIEDDRYNHVITRIQSRFK
NSLTPNEILAFEFHPAGHSLAYSRIDGSITIWPSIQATFIPGKMIHIKDACGTDKLVTSI
SWNPNEITQLITSCNSDELDIWEYDELNLKASKVRSISVDHKTKLNNALFDPTGEYILAI
TKSDSIYLFSAKDDYRLLHTIKLKSIMSSDTLYSVTWDSSGSNIFLGTKNGSIIAMSINK
ENNEMFKVLEVTAHRFSVTCLKIDPLGRYLFSGSKDGSCSIWELRTLICIKEISGLESNI
LSMDICHLGKMLGLCLEDERVCFCDVTTGKIIYESSLSGSNSEPLLRFFPDKTMFILSGK
NDTLEKHFYGSGKLSLLSVLSTESRKNGDSKGHSKGISKKSSKKSNTDREKSQGPRSTRP
NRKSRFLASKRR
NT seq 1299 nt   +upstreamnt  +downstreamnt
atgccagcaacagcaattgattcattcaacaacatttccagcaagagtcacgagtacgtt
aatgtagttgagaatgtcgccgtcaagtttttacaaagtgctttcgagaatgaacacatt
aatgctatagaagatgatcgctacaatcatgtcatcaccagaatccaatcacggtttaaa
aactcgttaacacctaatgaaatactggcctttgaattccacccggctggtcactcgtta
gcatacagtagaattgatggttctattactatttggccatctattcaagccacttttatt
ccaggaaagatgatacatattaaagatgcatgtggaaccgataaattagtaacttcaatc
tcatggaatcctaatgaaataacacaattgattacttcttgcaattctgatgaactagat
atatgggaatacgacgaattgaatttaaaggcatccaaagtgaggagcatctcggtcgat
cataaaactaagcttaataacgctttatttgatcccactggcgaatatatacttgcaatt
accaaatcagactcaatttacttattcagcgcaaaagatgactataggctgttacatact
ataaaattgaaatccattatgagcagtgatacactatattctgtaacatgggacagttca
ggttctaatattttccttggaactaaaaatggcagtattatagctatgagcataaataaa
gaaaataatgaaatgttcaaggtactagaagtaacagcacataggttttcagttacatgt
ttaaaaatagatccattgggcagatatttattttctggtagcaaagatggctcctgctca
atatgggagcttcgaactctcatatgcattaaagagatatctgggttagaatctaatatt
ttatcaatggatatctgccatttagggaaaatgttaggtttatgtctagaagatgagagg
gtatgcttttgtgatgtaacgactggaaagataatatatgaatcatctttatccggctct
aattcagaaccactactaagatttttcccagataagactatgtttattttatctggtaag
aatgacactctggagaaacatttctatgggtcaggtaaattgtcattactatcagtttta
tccacagaatccagaaaaaatggagattctaaaggtcacagcaaaggaatatcgaagaaa
agtagcaagaaaagtaataccgatagagagaagagtcaagggccgagatctacacgtcct
aaccgtaagagtaggttcctggcatcgaagagacgttaa

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