Nakaseomyces glabratus: 2889928
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Entry
2889928 CDS
T01024
Symbol
CDC48, GVI51_J09185
Name
(RefSeq) CDC48
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
cgr
Nakaseomyces glabratus
Pathway
cgr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cgr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
2889928 (CDC48)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgr03019
]
2889928 (CDC48)
03009 Ribosome biogenesis [BR:
cgr03009
]
2889928 (CDC48)
04131 Membrane trafficking [BR:
cgr04131
]
2889928 (CDC48)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgr04147
]
2889928 (CDC48)
Messenger RNA biogenesis [BR:
cgr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
2889928 (CDC48)
Ribosome biogenesis [BR:
cgr03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
2889928 (CDC48)
Membrane trafficking [BR:
cgr04131
]
SNARE
SNARE associated proteins
Others
2889928 (CDC48)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
2889928 (CDC48)
Exosome [BR:
cgr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
2889928 (CDC48)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_5
AAA_2
AAA_33
CDC48_2
TIP49
AAA_22
RNA_helicase
AAA_14
nSTAND3
Mg_chelatase
AAA_28
AAA_17
ATPase
Parvo_NS1
AAA_7
AAA_24
Vps4_C
IstB_IS21
AAA_25
NPHP3_N
AAA_18
DUF815
Sigma54_activat
ABC_tran
ResIII
PhoH
SLFN-g3_helicase
KAP_NTPase
Motif
Other DBs
NCBI-GeneID:
2889928
NCBI-ProteinID:
XP_448116
UniProt:
Q6FNS8
LinkDB
All DBs
Position
J:complement(966679..969171)
Genome browser
AA seq
830 aa
AA seq
DB search
MGEEHKPLLDGSGAEPTVEDSTATAILRRKKKDNTLIVDDATNDDNSVIAINSNTMDKLE
LFRGDSVLVKGKKRKDTVLIVLIDDELEDGACRINRVVRNNLRVRLGDLVSIHPCPDIKY
ASRISVLPIADTIEGITGNLFDVYLKPYFVEAYRPVRKGDHFVVRGGMRAVEFKVVDVEP
EEYAVVAQDTIIHWEGEPINREDEENNMNEVGYDDIGGCRKQMAQIREMVELPLRHPQLF
KAIGIKPPRGVLMYGPPGTGKTLMARAVANETGAFFFLINGPEVMSKMAGESESNLRKAF
EEAEKNAPAIIFIDEIDSIAPKRDKTNGEVERRVVSQLLTLMDGMKARSNVVVIAATNRP
NSIDPALRRFGRFDREVDIGIPDATGRLEVLRIHTKNMKLADDVDLETLAAETHGYVGAD
IASLCSEAAMQQIREKMDLIDLEEDEIDAEVLDSLGVTMDNFRFALGNSNPSALRETVVE
SVNVTWDDVGGLDEIKEELKETVEYPVLHPDQYTKFGLAPSKGVLFYGPPGTGKTLLAKA
VATEVSANFISVKGPELLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAKARGGSL
GDAGGASDRVVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPAILRPGRLDQLIYVPLPDE
PARLSILKAQLRKTPLEPGLDLTAIAKATQGFSGADLSYIVQRAAKYAIKDSIEAHRESL
AAAEAEVKTEGGDVDMTSEDVKKEPVETVDPVPYITREHFAEAMKTAKRSVSDAELRRYE
AYSQQMKASRGQFSNFNFGDSNQGTTETGNDGNSGANFGSAGDDDDDLYS
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaggaacacaagcccttgttggatggttctggtgccgaaccaactgtggaggac
agtaccgccactgctattttgagacgtaagaagaaggacaacacattgattgtggacgat
gctaccaatgatgacaactctgtgatcgctatcaactcaaacaccatggacaagctagag
ttgttcagaggtgactctgtgcttgtaaagggtaagaaaaggaaagacaccgtgctaatt
gtgttgattgatgacgaattggaggatggtgcctgtaggattaaccgtgtggtaagaaac
aacttgcgtgtgagattgggtgacctggtctcgatccacccatgcccagacatcaagtac
gctagcagaatttctgtgttgccaattgccgacacgattgaaggtatcactggtaactta
ttcgacgtctacttgaagccatacttcgttgaagcttatagaccagttagaaaaggtgac
catttcgttgtcagaggtggtatgagagctgttgaattcaaggttgttgatgtcgaacca
gaagaatatgccgtggttgcacaagataccatcatccattgggaaggtgagccaattaac
agagaagatgaggaaaataacatgaacgaagtcggttatgacgatattggtgggtgccgt
aagcaaatggctcaaatcagagaaatggtcgaattgcctttgagacacccacaattgttc
aaagccatcggtattaaaccaccaaggggtgttttgatgtatggtccacctggtactggt
aaaaccttgatggctagagctgttgccaatgaaactggtgctttcttcttcttgatcaat
ggtcctgaagtcatgtctaagatggcaggtgaatcagaatccaatctaagaaaggctttt
gaggaggctgaaaagaatgctccagctatcatcttcattgatgaaatcgattccattgct
ccaaagagagacaagactaacggtgaagttgaaagaagagttgtttcccaattattgact
ttgatggatggtatgaaggctagatctaatgttgttgtcatcgcagccactaacagacct
aactccattgacccagcactaagaagatttggtagattcgatcgtgaggtcgacatcggt
attccagacgctactggtagactagaggttctacgtatccataccaagaacatgaaactt
gccgatgacgtcgatcttgagactttggctgctgaaacccatggttatgttggtgccgat
attgcttctttgtgttctgaagcagctatgcaacaaattcgtgagaagatggacttgatc
gatcttgaagaagacgaaattgacgcagaagtgctagactctcttggtgtcactatggat
aactttagatttgctcttggtaactctaacccatctgccctacgtgaaaccgttgtcgag
agtgtcaacgttacttgggatgatgttggtggtctagatgagattaaggaagaattgaag
gaaaccgttgaatacccggttcttcacccagaccaatacaccaagtttggcttggctcca
tccaagggtgttctattctatggtccaccaggtactggtaagactttactagccaaggct
gttgccactgaagtttctgcaaactttatttctgttaagggtcctgaacttttgagtatg
tggtatggtgagtctgaatccaacatccgtgatattttcgataaagctagagctgctgct
ccaactgttgttttccttgatgaattggattcgattgctaaggctagaggtggttctttg
ggtgacgctggcggtgcctcagacagagttgtcaatcaattattgacagaaatggatggt
atgaatgcgaagaagaatgtcttcgttattggtgccaccaatagaccagaccaaatcgat
cctgctattttgagaccaggtagattggaccaactgatatatgttccattgccagatgag
ccagcaagattatcaattctaaaggcacaattaagaaagacacctctagaaccaggctta
gatctaacagcaattgccaaggctacccaaggtttctctggtgctgatttgtcatacatt
gttcaaagagctgctaaatacgccattaaggattctattgaagcccacagagaaagctta
gctgctgctgaagctgaagtcaagacagaaggtggagatgttgacatgaccagtgaagat
gtcaagaaggaaccagttgagactgttgatccagttccatacattaccagagagcatttt
gctgaagctatgaagactgccaagcgttctgtttctgatgctgaattacgtcgttacgaa
gcttactctcaacaaatgaaggcctccagaggtcaattcagtaacttcaactttggtgat
tccaaccaaggtactactgaaaccggtaatgacggtaacagcggtgctaacttcggttca
gccggtgatgacgacgacgatttgtacagttag
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