Nakaseomyces glabratus: 2890822
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Entry
2890822 CDS
T01024
Symbol
GVI51_L06787
Name
(RefSeq) uncharacterized protein
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
cgr
Nakaseomyces glabratus
Pathway
cgr03013
Nucleocytoplasmic transport
cgr03015
mRNA surveillance pathway
cgr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cgr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
2890822 (GVI51_L06787)
09122 Translation
03013 Nucleocytoplasmic transport
2890822 (GVI51_L06787)
03015 mRNA surveillance pathway
2890822 (GVI51_L06787)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgr03019
]
2890822 (GVI51_L06787)
03041 Spliceosome [BR:
cgr03041
]
2890822 (GVI51_L06787)
Enzymes [BR:
cgr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
2890822 (GVI51_L06787)
Messenger RNA biogenesis [BR:
cgr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
2890822 (GVI51_L06787)
Spliceosome [BR:
cgr03041
]
Complex C
Other components
EJC/TREX
2890822 (GVI51_L06787)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
2890822 (GVI51_L06787)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
2890822
NCBI-ProteinID:
XP_449077
UniProt:
Q6FL17
LinkDB
All DBs
Position
L:complement(787237..788556)
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AA seq
439 aa
AA seq
DB search
MSHEGEEDLLEYSDNEQEIQVDNKETAVEGTTENEATQENGEADKKGSYVGIHSTGFKDF
LLKPELSRAIIDCGFEHPSEVQQHTIPQSIHGTDVLCQAKSGLGKTAVFVLSTLQQLDPV
PGEVSVVVICNARELAYQIRNEYLRFSKYMPDVRTAVFYGGTPIAKDAELLKNKDTAPHI
VVATPGRLKALVRDKMIDLSHVKNFVIDECDKVLEELDMRRDVQEIFRATPRDKQVMMFS
ATLSQEIRPICRRFLQNPLEIFVDDEAKLTLHGLQQYYIKLEEREKNRKLAQLLDDLEFN
QVIIFVKSTSRANELTKLLNASNFPAITVHGHMKQEERIARYKAFKDFEKRICVSTDVFG
RGIDIERINLAINYDLLNEADQYLHRVGRAGRFGTKGLAISFVSNKEDEEVLSKIQERFD
VKIAEFPEEGIDPSTYLNN
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgtcccacgaaggtgaagaagatttattggagtactctgacaacgagcaagagatccaa
gttgacaacaaggagactgctgttgaaggtactaccgaaaatgaagctacccaggagaat
ggtgaggctgacaagaagggttcctacgttggtatccactctaccggtttcaaggacttc
ttgttgaagcctgagttgtccagagctattatcgactgtggtttcgagcacccttctgaa
gtccaacagcacaccatcccacaatccattcacggtacagatgtgctatgtcaagccaag
tccggtttgggtaagaccgcggtcttcgtcctgtccacattgcaacagctagatccagtt
ccaggtgaagtgtccgttgttgttatatgtaacgccagagagttggcttaccaaatccgt
aacgaatacctaagattttccaaatacatgccagacgtcagaaccgctgtcttttacggt
ggtactccaatcgccaaggatgccgaactactaaagaacaaagacaccgctcctcacatt
gttgtcgctactccaggtcgtctaaaggcccttgttagggacaagatgattgacttgtct
cacgtcaagaacttcgttatcgatgaatgtgacaaggtccttgaagaacttgacatgaga
agagacgtccaagaaattttcagagccactccaagagacaagcaagtaatgatgttctcc
gccaccctatcccaagaaatcagaccaatctgcagaagattcctacaaaacccactggaa
atctttgtcgatgatgaggctaagttgactctacacggtctacaacaatactacatcaaa
ttagaagagcgtgagaagaaccgtaaacttgcacaattgctagatgacttagaattcaac
caagttatcatctttgtcaaatctacctccagagctaacgaactaacgaaactattgaac
gcttcaaacttcccagccattaccgtccatggccacatgaaacaagaagaacgtattgcc
cgttacaaggctttcaaggactttgaaaagcgtatctgtgtctccactgatgtcttcggt
agaggtatcgatattgaacgtatcaacttggctattaactacgatttactaaatgaagcc
gaccaatacttacaccgtgttggtagagccggtagattcggtaccaagggtttggctatt
tcttttgtctctaacaaggaagacgaggaagtcttgtccaagattcaagaaagattcgac
gtcaagattgctgaattcccagaggaaggtattgacccatccacttacttaaacaactaa
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