Nakaseomyces glabratus: 2890892
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Entry
2890892 CDS
T01024
Symbol
SNF5, GVI51_L01903
Name
(RefSeq) SNF5
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
cgr
Nakaseomyces glabratus
Pathway
cgr03082
ATP-dependent chromatin remodeling
cgr03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cgr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
2890892 (SNF5)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
2890892 (SNF5)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cgr01009
]
2890892 (SNF5)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgr03021
]
2890892 (SNF5)
03036 Chromosome and associated proteins [BR:
cgr03036
]
2890892 (SNF5)
Protein phosphatases and associated proteins [BR:
cgr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
2890892 (SNF5)
Transcription machinery [BR:
cgr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
2890892 (SNF5)
SWI/SNF complex
2890892 (SNF5)
Chromosome and associated proteins [BR:
cgr03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
2890892 (SNF5)
PBAF complex
2890892 (SNF5)
SWI/SNF complex
2890892 (SNF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
Motif
Other DBs
NCBI-GeneID:
2890892
NCBI-ProteinID:
XP_448862
UniProt:
Q6FLN2
LinkDB
All DBs
Position
L:complement(256002..259121)
Genome browser
AA seq
1039 aa
AA seq
DB search
MNNQAADNVMNNDPNNGTQTSNTGKPNKKPNPQSASIMQTIFRNIGTPSFKLSQIPQQYL
QNLTPQQLQMIQNRHQQLLYARMQQQQAQNSQASTPQEQVSAANKISTQRKPASNAPSPA
VQEIQQNHAFQQSNSTPTAFHNSPPNSSTGSVNPNTGGVPPTLPPQIAQLPLASQQQVLQ
TLKQQAIAKNNPAVVAAITAAEQHVKNLLEQQDQQNTGSKSQTKMTANKQGSRVVNQKMT
TAANYVPESPGITNQIPPMALPQNIPPPQIDMRKYELPSFQTINYDPPETKLPNPSYWSS
RNPTTDILLYEQITQRDKANVSAQHREVNGYDPFSIYGFSNKEYVSKLWHTLKYYQDLKT
TRMKSITNTSQNIPTASIWGNGYSGYGNGITNTTTKVVPFHPIAGRNFYSPDKIKLYKQA
MSEDAENLVPVRLEFDLERDKFFLRDTLLWNRNESVVDINEFVEDMVADYQFDTSIKRHA
IDMISQSIKEQVQEYQPNPFIEEHLSRIGGDDMRITIKLDIVVGQTQLIDQFEWDLSNPD
NSPEEFAECMCRELELPGEFVSAIAHSIREQVHMYHKSLIMLGYGFDGGIVEDDDIRSRI
LPVVTVDDVYRPPADCKVFTPNILQISPAELERLDKDKDRDTRRKRRQGRFSRRGNTNIG
GMSMSSTNANASAANNSSVGGEATLPDIADIPRTFRTPIPSTILPGGVDLGPSVFSYNLE
TSVEYQSRGPPPEPVMPPCYVVDHIPGKSMLVSIKLPQKTAAPLAVEQHGQHFGGDSTNT
DVPIKKEDDNISAEAAPSMQNISNPSQTIQAASEVPEDKREQDIDAITPIVESQTEEKKE
EPETATENSEKIEDKETMDKVVEAESGEKQVVSEQELNSHIDEKLDGEKPPVDSTDIKKV
GESEQVNGTPPLEVNTTQKEAKSPSDEVPQSIESGMKSPEEENKEGSSNDNRLESENINT
SNENDNADTEVAGKDNEETEVAGKDNKETEVAGKDNEETEATRMGSEESGNQYDDNQTHN
ETTEKPDTDNTDGQEKTQL
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atgaataatcaggccgccgacaatgttatgaataacgacccgaacaatggcacgcaaaca
agcaatacagggaaacctaacaagaagcctaatccacaaagcgcgtcaataatgcagacg
atattcaggaatataggaacaccatcttttaaactgtctcaaataccacaacaatacctt
caaaatctgactccacagcaattgcaaatgatacagaacagacatcaacagctgttgtat
gcgagaatgcaacaacaacaagctcagaacagtcaagcatcaacaccgcaggaacaggtg
tcagcggccaataaaatttcaactcaacggaaaccagcatcaaatgccccctcaccggca
gtgcaggaaattcaacaaaatcatgcttttcaacaaagtaactctacacccaccgcattt
cataattccccacctaattcgtcaacgggctctgtaaatccaaacacagggggagtaccg
ccaacgcttcctccacaaatagctcaattaccactggcttctcagcaacaagtattacag
actttgaaacagcaagcaatagcaaaaaataatccagctgtggttgccgcgataacagca
gctgaacaacatgtaaagaacttgttggaacagcaggaccaacagaatacaggatcaaaa
agtcagacaaaaatgacagcgaataaacaaggttcaagggtggtgaaccagaagatgaca
acagctgcaaattatgttccagaatctccaggaataaccaaccaaatacctcccatggcc
ctcccgcagaatattccacccccacaaattgatatgaggaagtacgaactaccaagcttc
caaaccattaattatgatcccccagaaactaaactacctaatccatcatactggtcctca
agaaaccctactactgatatcctgctctatgagcaaattactcaaagggataaagctaat
gttagtgcccaacacagagaagttaatgggtatgatcctttcagtatttacggttttagt
aacaaagaatatgtaagcaaattgtggcataccttaaaatactatcaggatttgaagacc
accagaatgaaatctataacgaatacctctcaaaacataccaacagcaagtatatggggt
aacggttactcgggttatggcaatggaatcacaaataccactacaaaagttgtaccattt
catccaattgctggtagaaacttctattcacccgataaaataaaactatacaaacaggca
atgagtgaggacgcagaaaatctcgtccctgttagattagaatttgacttggagagggat
aaattcttcttgagagacacattactatggaatcggaatgaatctgttgttgacataaac
gagtttgtggaggatatggtagccgactatcaatttgacacttcgatcaaaagacacgcc
attgatatgatttcacagtccataaaagagcaagttcaggaatatcaacctaatccattt
attgaagaacatttgtcaagaattggtggagacgacatgagaattacaattaaacttgac
attgttgtaggacaaacccaattgattgaccagttcgaatgggatctttccaaccctgac
aattccccagaggagtttgccgaatgtatgtgtcgcgaattagagctacctggtgaattt
gtctccgcaattgctcatagcattagagagcaggttcatatgtaccataaatcattgata
atgctgggctacggatttgatggaggtattgtagaggatgatgatattagaagtagaata
ctacccgtggtcacagttgatgacgtatatagacctcctgcagattgtaaagtttttacg
cccaacatacttcaaatttcccccgctgagctggaaagactagataaagacaaagatagg
gataccagacgtaaaagaagacagggtagatttagtagacgtggtaatacaaatattggt
ggtatgtcgatgtcttctactaatgcaaacgcaagtgcagcaaacaactcatcagtgggt
ggtgaggctacattacctgatattgctgatattccaagaacctttagaactcctatacca
agtaccatacttcctggaggtgttgatttaggcccatctgtcttctcatataacttagaa
acgtctgttgaatatcaatcgagggggccaccacctgaaccagtcatgcctccatgttat
gttgttgatcatattcctggaaagtcaatgttagtatccattaaactcccccaaaagact
gcagctccactggcagtagaacaacatggccagcatttcggaggtgacagcactaacact
gatgtcccaattaaaaaggaggatgataacatttctgctgaagctgcaccatcaatgcaa
aatatatcaaacccttcacaaactatccaagcagcaagtgaagtccccgaggacaagaga
gaacaagatatcgatgctattactccaattgtagaaagtcaaactgaagagaaaaaagaa
gagcctgagacggcaaccgaaaattctgagaagattgaagataaagaaacaatggacaaa
gttgtggaggcagaaagtggtgagaaacaagtcgttagtgaacaggaattaaactcacat
atcgatgaaaaacttgatggcgagaaaccaccagttgattccactgacataaaaaaggtt
ggtgaatcagaacaagtaaacggtaccccaccacttgaagttaatacaacacaaaaggaa
gccaaatctccatccgacgaagtaccgcaatccatagaatcagggatgaaatctcctgag
gaggaaaacaaagaaggctcatctaatgataataggctagaatctgaaaacataaatact
tccaacgaaaatgataatgctgatacggaagtagctggaaaggataatgaagagacagaa
gttgctggaaaggataataaagagacagaagttgctggaaaggataatgaagagacagaa
gctactagaatgggtagtgaagaaagcggaaatcaatatgatgataatcagactcacaat
gagaccaccgaaaaacctgatacagacaatacagatggtcaggaaaagacccaattgtaa
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