Nakaseomyces glabratus: 2890951
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Entry
2890951 CDS
T01024
Symbol
GVI51_L11891
Name
(RefSeq) uncharacterized protein
KO
K12854
pre-mRNA-splicing helicase BRR2 [EC:
5.6.2.6
]
Organism
cgr
Nakaseomyces glabratus
Pathway
cgr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cgr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
2890951 (GVI51_L11891)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgr03041
]
2890951 (GVI51_L11891)
Enzymes [BR:
cgr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
2890951 (GVI51_L11891)
Spliceosome [BR:
cgr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
2890951 (GVI51_L11891)
Complex C
U5 SnRNP specific factors
2890951 (GVI51_L11891)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
BRR2_plug
Helicase_C
AAA_22
Motif
Other DBs
NCBI-GeneID:
2890951
NCBI-ProteinID:
XP_449287
UniProt:
Q6FKF7
LinkDB
All DBs
Position
L:complement(1295049..1301471)
Genome browser
AA seq
2140 aa
AA seq
DB search
MTDEKSKNNIREIYRHDQMSNQVLNRDRRFEDRKTDIKTDAEMSNPKTLRGHVSLKDMGS
GLNISKSTDEDKARILEELQDESILDGDQEVPERSPALPLMQNKSILELDDVPKLVYTPT
DSSNRDTYSNLLTWCTDLLGSDVPEDIILGTTDLIISLIKEKITDTNAKDLKLVVEKELF
TRLRDSDFNKLLKLVDSISDYKLVDNNKNVEDTTVPLVINDGGDIIDTNDSLKNPLLIDD
SVPKDNNDYNEKIKNLENDKDSILIKGNKSYLPTDIPATQLTEEYLVNLFKTEIPNNDPY
VLYSKVIASNTDTNNMIQNLIESVGDDVSSTLIQFIKHNGIKIKWAHEFYNSQGNETSVI
ERIKNSGQADIAEEFKLLINGSSRKRKSSEDKSEYDYPDSIPQKKQDTMIKFSTNDLKNL
ASAKISGNLSQNITVTLPEGSFKRVRENLEEIHIPAPQKPVYESELINISDLPKWAQKAF
PSKEVTTLNYIQSKVYHKAFHDDKNLLMCAPTGAGKTNVAVLTILQVLSQYINEDTDSLK
LNDFRIVYVAPLKALVQEQVREFERRLSNFGIKVSELTGDTTLTRSEIEKFQVLVTTPEK
WDVLTRKNDENDIMLKLKLLIIDEIHLLNDQRGPVLESLIMRAKENCRLRSNPRIIALSA
TLPNYEQVAKFLQVPEESIYYFDNSYRPCPLSQVFCGVKSTNSVKKLSFVNEVCFEKVCD
AVKDGHQVIIFVHSRKETTRTAKFIADKFSSLEKNILFFEENSRSILKSEGENSKDIDLK
TLLPQGIGIHHAGLARDDRSLSEDLFADGVLRVLVSTATLAWGVNLPAHTVIIKGTDIYS
PEVGNWIRLSPQDLLQMLGRAGRPRYDTSGEGIIITNQTDIQYYLGILNQQLPIESQFLS
KFVDNLNAEISLGMVKTKLDAKRWIKDSYYYVRLCYDPSTYLPENFKEIDNDKRISCFIS
GLIDAAIELLLSMSLIMIDKRNGTYIPTKLGRIASHYYISCNSVAKYFQRLKKTCSKSEL
FQIFSESEEFKYVSVKQEELIELKTLYDKSPIPVSVPLEEPSSKINLLLQAYISKIKLDG
FALNADMIFVTQNAGRLLSAMKEICLVFGWSTTTKYLLELTKSVHYQMWPVCTPLRHFKT
CPKDVIRRAESSSFPWQNYLKLTKASDVGKVIRNEKYGKLVLDLLQRYPKLEVSYICQPI
TPSLILIQLEILPDFVWDPKIHGFGEIFFVLVEDVSGSSILFSQKIVIKESDVGKEYVLS
IPIQLSVSQQKRLPPNIFITVTSEKWNQFSKVLPIQLNNLKLPKKLPSKEIVNSIESLNL
SKELPSDFVKALGFNSLNKIQSDVFNEVYHGTESLLVCSPPCTGKTTLALLATLSHIINT
KGRIIYVVGNEKKLQSCYEKWMIFFKSINDSIKVGKLGGNLQDNLITFSHSHITLTSPQQ
VEVLTHRWRKLKLLLDVDLLVFDDIHEIGQGLTGANYEIAVSRFNFIKTQADFNPRIIAF
SNCLLNPSDIAGWIGVKKENTHNFATDEDQSYRVINIKAFENIFANDYTRSMLLYATSFV
LSSQSTLVKNVLLVTTGKVGALRAANEILALLKSNSKLHKISEITDFGIDQQDMEKSAQK
YLSYGIGLCHEGMKHATISNIVNLFNAGVISVLISSRFTMIQNIKPSQIVVLGTSWHNCG
ESSPVHYSINEIMNLANLSYHHSSDVTILTDSNRLPLYNRFLNDGIPVESFLYEKLIDLL
LTEVVIGTVKSRQDCLDILTFTYFYRRIHNNPSYYGLKDASSLSISGFLTEIVETAINDL
STSQLIKLVKGLSSDDIHNEIIEETTWSRISTIHGISAATLIGYIQSLDGKTTLTDMLHL
LVKTSELSAIEFHEDTLSIVHKLAALVPLKFQGISKMEYSSYASFVLLQCHFSRISIPYE
LADHINKILLVIPQLLSSMIDILASQGLMSALTVMDMYQMVMQALWDIDSPLKQIPYFTN
DIIKICKEKNIDSVYDIMELDDDVRDEILSFNDSELLNIASFVNTYPNIEIAHELDHKVV
PMGSSQNITINIFRDDVPDSLETITPYYPAKHLEHWWIVLGDVSKQNVYAIKYVKLPSES
NHFKLSFSLPERGTHKLTIWAICDSYFEADKESSFEIECV
NT seq
6423 nt
NT seq
+upstream
nt +downstream
nt
atgactgatgagaagtccaagaataatatcagagagatatatcgtcatgatcaaatgtct
aaccaagtgctgaatcgagataggcggttcgaggacaggaaaaccgatatcaagactgat
gctgagatgtctaatcccaaaacactccgaggtcatgtttcactgaaggatatgggcagt
ggacttaatatatccaagtcgactgatgaagataaggctaggattttggaggagttacaa
gatgaaagcatattagatggggatcaggaagtcccggagaggtctccagctctaccacta
atgcaaaataagtccattctggaattggatgatgtacccaagctagtctacactcccact
gattctagtaatcgggatacttacagtaatttactcacatggtgtactgatttgttagga
agtgatgttccagaggatattatattggggaccacggatcttattatctctcttattaaa
gaaaaaataacagatactaatgctaaggatttgaagctagttgtagaaaaagaattattt
acacgattaagagattcagacttcaacaaacttttgaagctagttgattcaatatcggat
tacaaacttgtggataacaataaaaatgtggaagatactactgtaccacttgtaattaat
gatggtggtgatattatagacactaatgattccttaaaaaacccactacttatcgatgac
tctgttcctaaagataataatgactataacgagaagattaaaaaccttgaaaacgataaa
gacagcatactaatcaagggcaacaaatcatatttaccaactgatatcccagctactcaa
ttaaccgaagaatacttggtaaatttatttaaaaccgaaattccaaataacgatccttat
gtcctgtacagtaaagttattgcctcaaatactgatacaaacaatatgatacagaacttg
attgagtcggtaggcgatgatgtgagttctacactgatacaatttatcaaacacaatggt
ataaaaatcaaatgggcacatgaattttataattctcaaggaaatgaaactagtgtaatt
gagagaataaaaaatagtggccaagctgatatagcagaagagttcaaattacttataaat
gggtcatcacgcaagcgtaaatcatcagaagacaaatctgagtatgattatcccgacagt
attcctcaaaaaaaacaggatacaatgattaaattcagtactaatgacttaaaaaattta
gcctcagctaaaatatctggcaacctttcacagaatataacagtaacattacctgagggg
tcatttaaaagggtaagagaaaatttagaagaaatccatatccctgcaccacagaagcct
gtatatgagtctgagttaattaacatatctgatcttcctaaatgggctcaaaaggctttt
ccatcgaaagaagttacgactcttaactatatacaatccaaagtgtaccataaagccttt
cacgacgataaaaatcttttaatgtgtgcacctactggtgcaggtaaaacaaatgttgca
gtattgacaatattgcaagtcttatcgcaatatattaatgaagatacggactcattaaaa
cttaacgactttagaattgtctatgttgcacctttgaaggcgctagtccaagaacaagtt
agagaattcgaaaggagactatcaaattttggtataaaggtatccgaactaactggtgat
acaacactaactagatctgaaatagagaaatttcaagtcttagttaccacacctgaaaaa
tgggatgttctgactagaaagaatgacgaaaatgatattatgctaaaactaaagcttctc
atcattgatgaaattcatcttttaaacgaccaacgtggacctgtattagagagtttaata
atgcgtgccaaagagaactgtcgactaagatcaaatcctaggattattgcactttctgct
actttaccaaactatgagcaagttgctaaatttttacaagttcccgaagaatccatatat
tattttgataactcatatagaccatgtccattatcacaggtgttctgtggtgtcaagtct
actaattctgtaaagaaattatcttttgtgaatgaagtttgttttgagaaagtctgcgat
gcagttaaagatggccatcaagtcattatttttgtacattccagaaaagaaactactcgt
acagctaaatttattgccgataaatttagctctcttgaaaagaatatactctttttcgaa
gaaaactcgagatcaattttaaaatcagaaggcgagaactccaaagatattgatctcaaa
actttattacctcaaggtattggaattcatcatgccggtctagccagagacgatagatct
ttatctgaagacttatttgcagatggtgtcttaagagtattggtgtcaaccgctacttta
gcttggggtgttaacttaccagcccatactgttataatcaaaggtactgatatatactca
cctgaggtgggcaattggataagactatctcctcaagatttactgcaaatgcttggtaga
gcaggtcgtcctagatatgatacttctggagaaggaataattatcacaaatcaaacagat
attcaatactatctgggaattttaaaccaacaacttccaatagagtcgcaatttttatca
aaatttgtggataacttgaatgctgaaatttctctcgggatggtgaaaactaaattggat
gcaaaaagatggataaaggattcgtactactacgttagactttgctatgatcctagtact
tatcttccggaaaacttcaaggagatagataacgataagcgtatttcttgtttcatatca
ggcttgattgatgctgctattgaattgctattatctatgtcattaataatgatcgataaa
agaaatggtacatatattccaacaaagctgggcagaatagcttctcattactatattagc
tgcaattcagttgcaaaatattttcagaggctcaaaaagacttgttcaaagtctgagctg
ttccaaatattctcagaatcagaggaatttaagtatgttagtgtgaaacaggaagaactt
attgaactcaagaccttatatgacaaatcaccaatccccgtttctgtgcccttagaagaa
ccttcttctaagatcaaccttttactacaggcgtatatttcaaaaataaagctcgatgga
tttgctttaaatgcagatatgattttcgttactcaaaatgctggacgacttttgtcagca
atgaaagaaatctgccttgtttttggctggtcaaccacaacaaagtaccttctggagtta
actaagtcagtacactatcaaatgtggcccgtctgtacaccattaagacatttcaaaact
tgtccaaaagatgtaattaggagagcagaatcttctagctttccttggcagaactatctc
aaactcacaaaggcatctgatgttggaaaggttataagaaatgagaaatatgggaagttg
gtattagatttattacaacggtaccccaaattagaagtgagctatatctgtcaacctata
acgccaagcttaattctgatacaactggaaattcttccagacttcgtttgggaccctaaa
attcacggatttggcgaaatattctttgtattggtagaagatgtttcgggctcgtcaatt
ttattctctcaaaaaattgttataaaagaatctgatgtgggaaaagaatatgtattgagt
attcctattcaattatctgtatcacaacaaaaaagactccccccaaacatcttcatcaca
gttacttcagaaaaatggaatcaattctctaaggtcctaccaatacaactgaataatttg
aaactacctaaaaaacttccatcaaaagaaattgtcaacagtattgaatctctgaattta
tctaaagaattacctagtgattttgtgaaggcacttggcttcaattctctgaacaaaatt
cagagtgacgtatttaacgaagtatatcatggaaccgagagcttattagtttgctctcca
ccctgtacaggaaaaacaacactagcattacttgccactctttcacatataattaatacc
aaaggtagaattatttatgttgtggggaatgaaaaaaaacttcaatcatgttatgaaaaa
tggatgatcttttttaagtcaataaatgatagcatcaaggtcgggaaactaggaggcaat
ctccaagataacttaattactttttctcattctcacataactctgacttcgccgcagcag
gtagaagtgttaactcataggtggaggaaactgaaattactacttgacgtcgacctccta
gtttttgatgatattcatgaaataggccagggactgacaggagccaactacgagattgct
gtttctagattcaacttcatcaaaacccaagcagacttcaacccaagaataatagcattt
agtaattgcctcttgaatccatcagatattgctggttggattggagttaaaaaagaaaat
acacataacttcgcgaccgacgaagatcagagttatagggttataaatataaaagcgttt
gaaaatatatttgcgaacgattatacaagatcaatgctattatatgcaactagttttgta
ttatcatcgcaatcaactctggtgaaaaatgtcctattagtaacgaccggaaaagttggt
gctttacgtgctgcaaatgaaatactagccttattgaaatcaaattctaagcttcacaaa
ataagtgaaataaccgactttggcattgatcaacaagacatggaaaagtctgctcagaag
tatctatcttacggtatcgggctatgtcacgaaggcatgaaacatgctacaatctctaat
atagttaatttgttcaacgctggtgtaatttctgttctaatatcatctagattcacaatg
attcagaatatcaaaccaagtcaaattgttgttttaggcacaagctggcataactgtgga
gaaagctccccagtacactactcaataaacgaaattatgaatctagctaatttaagctat
catcattcatcagatgttactattttgaccgattccaacagactaccactttataacaga
tttttgaatgatggcataccggttgaaagttttctttatgaaaagttgattgatttgtta
cttactgaggtagtcattggaacagtaaaatccaggcaagattgccttgacatactaact
ttcacttatttctaccgtagaattcataataatccatcttattatggtttgaaagatgcc
agctccttatctatatcaggttttctcactgaaatagttgaaactgctattaatgacttg
agcacttctcaattgattaagcttgtcaagggtttaagctccgacgatattcataatgag
attattgaagaaaccacatggtccagaatttccactattcatggcatctctgctgctaca
ctaattggttatatccaatccttagatggcaaaacaacattaactgatatgttgcatctt
ttagtcaagacttctgaattatcagcaattgaatttcatgaggatacgctatcaatagtt
cataagttagcggctttagtaccattgaaattccaaggcatatctaaaatggagtattct
tcatacgcctcttttgttttattacaatgccatttttctcgcatttctattccttatgaa
ctagcagaccatatcaataaaatattacttgtgataccgcaattgctcagctcaatgata
gatatacttgccagccaaggcttaatgagtgccctgactgtgatggatatgtaccaaatg
gtaatgcaagcattatgggacattgatagtcctttgaaacaaataccatactttacaaat
gatatcataaagatttgcaaagaaaagaacattgattcggtatatgacattatggagtta
gatgatgacgtaagagacgaaatattatcctttaatgattccgaattactaaatattgca
agctttgttaacacttatccaaatattgaaatagctcatgaactggaccacaaggtagtt
ccaatgggaagctcacaaaatattaccataaacatatttcgagacgatgtacctgattcg
cttgaaactataacaccatattatcctgcaaaacaccttgaacattggtggattgtatta
ggtgatgtttcaaagcaaaatgtctatgctattaagtatgttaaactcccttcggagagc
aatcactttaaactatcattctcgttaccggaacgaggaacacataaattaactatttgg
gctatctgtgattcctactttgaagccgataaagagtcatcatttgaaatagaatgtgta
tga
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integrated database retrieval system