KEGG   Nakaseomyces glabratus: 2891533
Entry
2891533           CDS       T01024                                 
Symbol
GVI51_M03993
Name
(RefSeq) uncharacterized protein
  KO
K15542  polyadenylation factor subunit 2
Organism
cgr  Nakaseomyces glabratus
Pathway
cgr03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:cgr00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    2891533 (GVI51_M03993)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cgr03019]
    2891533 (GVI51_M03993)
Messenger RNA biogenesis [BR:cgr03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     2891533 (GVI51_M03993)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_THOC3 WD40 Beta-prop_IFT122_1st Beta-prop_WDR3_2nd WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st WD40_Gbeta Beta-prop_EML_2 WDR55 EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st Beta-prop_EML Beta-prop_Aladin Beta-prop_WDR36-Utp21_2nd ANAPC4_WD40 Beta-prop_TEP1_2nd Beta-prop_IFT140_1st Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_NOL10_N WDR90_beta-prop_4th DSE1_N Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_EIPR1 ASA1 CFAP251_N WD40_RFWD3 Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st NBCH_WD40 eIF2A PAC11 Beta-prop_WDR41 PEP5_VPS11_N Beta-prop_WDR35_TULP_N Beta-prop_DCAF4 Beta-prop_Vps41 Beta-prop_VPS8 Beta-prop_IP5PC_F
Other DBs
NCBI-GeneID: 2891533
NCBI-ProteinID: XP_449524
UniProt: Q6FJS0
LinkDB
Position
M:complement(460370..461737)
AA seq 455 aa
MDQSAAVEGVPQKKYLTLRRSVDVSSSYNRLYYLKKHGLSLPPIEPETSFTANIMPPDAY
KRNDRIVNLPTKFTHLSSNKVKHVIPAIQWSPEGRRLIVATFSGEFSLWNGSSFTFETIM
QAHDTSVTTMKYSHAGDWMISGDADGTIKIWQPNFNMVKELDRIHTEGIRDVAFSNNDSK
FVTCSDDNILKIWNFSNGQQERVLSGHHWDVRSCDWHPELGLIVSGSKDNLVKLWDPRSG
QCVSTLLKFKHTVLKTRFQPTKGNLLAAISKDKSCRVFDLRASMNELMCVRDEVDFMELE
WSTINESMFTVGCYDGSLKHFDLGQDTEKPIHIIPFAHEKCISAIAYNPVGHILATAAKD
RTIRFWTRARPVDPNAFDDPTYNNKKMTGWFFGINNDINAVREKSEYGAAPPPASTAFPQ
QTQYNNNISRVPEIKEPTPTTDKEQRTSILPGLSI
NT seq 1368 nt   +upstreamnt  +downstreamnt
atggatcaaagtgctgctgtggaaggtgttcctcagaagaagtatctaacactcaggaga
tcggttgatgtgagttcttcgtataatagactgtactatttaaagaaacatgggctctca
ctcccgcctatagaacctgaaacttcgtttactgctaatatcatgccacccgatgcgtac
aagcgtaatgataggatagttaatctgccgacgaaatttacacatttgagttccaataag
gttaagcatgttattccagcaatccaatggtctcctgaggggagaagactaattgttgca
actttcagtggtgaattctcgctttggaatggttcatcttttacatttgagactattatg
caggctcatgatacctcagtgacaacaatgaaatattcccatgctggagattggatgatt
agtggtgacgcagatggtacaatcaaaatatggcagcctaatttcaatatggtgaaggaa
ttagatcgaattcacacagaaggtattagagacgtggcttttagtaataatgattccaag
tttgttacttgttctgatgataatatattaaaaatttggaattttagcaatggccaacaa
gaaagagtactatctggacatcattgggatgtcaggagttgtgactggcatccagagtta
ggactgatagtatcaggatcaaaagataatttagttaaactttgggatccgagatctggc
cagtgtgtatctacattactaaaattcaaacatactgtacttaaaactagatttcaaccg
acaaagggcaatttgctggcagctatctccaaggataagtcttgtagagtatttgatctt
cgtgcaagcatgaacgaattaatgtgtgttcgtgatgaagttgatttcatggaactggaa
tggagtactataaacgaatcgatgtttaccgttggatgctatgacggctctttaaaacat
tttgatctcggccaagatacggaaaagcccattcatataataccgtttgcacatgaaaag
tgcatatcagcaattgcatacaatcctgtgggccatatcctagccactgccgccaaggat
agaaccattcgattttggacaagagcaaggcctgtcgatccaaatgcctttgatgatcca
acatataataataagaaaatgactggttggttctttggtatcaataatgatatcaatgct
gtacgtgaaaagtctgaatacggcgcagctccgccaccagcgtcaacagcattcccacaa
caaactcagtacaacaataacatctccagagtaccagaaatcaaagaaccgacaccaaca
actgataaggaacaaaggacttctattcttccaggattgagtatataa

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