Nakaseomyces glabratus: 2891681
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Entry
2891681 CDS
T01024
Symbol
GVI51_M06523
Name
(RefSeq) uncharacterized protein
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
cgr
Nakaseomyces glabratus
Pathway
cgr03013
Nucleocytoplasmic transport
cgr03015
mRNA surveillance pathway
cgr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cgr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
2891681 (GVI51_M06523)
09122 Translation
03013 Nucleocytoplasmic transport
2891681 (GVI51_M06523)
03015 mRNA surveillance pathway
2891681 (GVI51_M06523)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgr03019
]
2891681 (GVI51_M06523)
03041 Spliceosome [BR:
cgr03041
]
2891681 (GVI51_M06523)
03009 Ribosome biogenesis [BR:
cgr03009
]
2891681 (GVI51_M06523)
03012 Translation factors [BR:
cgr03012
]
2891681 (GVI51_M06523)
Enzymes [BR:
cgr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
2891681 (GVI51_M06523)
Messenger RNA biogenesis [BR:
cgr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
2891681 (GVI51_M06523)
mRNA cycle factors
Stress granule specific factors
2891681 (GVI51_M06523)
Spliceosome [BR:
cgr03041
]
Complex C
Other components
EJC/TREX
2891681 (GVI51_M06523)
Ribosome biogenesis [BR:
cgr03009
]
Eukaryotic type
90S particles
Helicases
2891681 (GVI51_M06523)
Translation factors [BR:
cgr03012
]
Eukaryotic type
Initiation factors
eIF-4
2891681 (GVI51_M06523)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
AAA_30
NAT10_TcmA_helicase
AAA
DUF6718
PhoH
Motif
Other DBs
NCBI-GeneID:
2891681
NCBI-ProteinID:
XP_449633
UniProt:
Q6FJG1
LinkDB
All DBs
Position
M:complement(688924..690123)
Genome browser
AA seq
399 aa
AA seq
DB search
MSFNREHDLKLKFKSSKKLKISATFESMDLKEGLLRGIYSYGFEAPSAIQSRAITQIISG
KDVIAQAQSGTGKTATFTIGMLQAIDLKKHDLQALVLSPTRELAAQIGKVVTNLGDYMNV
KAYAMTGGKTMKDDLKKIQKHGCQVISGTPGRVLDMIKRRLIETRHVQILVLDEADELLS
DTLGFKHQIYDIFTKLPRTSQVVVVSATMSPEILEITKKFMNDPVKILVKRDEITLEGIK
QYYVNVEKEEWKFDTLCDIYDSLTITQCVIFCNSKKKVDWLAHKLKQSNFAVISMHGDMK
QDERDRVMNEFRTGQSRVLISTDVWARGIDVQQVSLVINYDLPEITENYVHRIGRSGRFG
RKGVAINFLTKIDASRMKEIEKYYKIKVKPMPADLSELS
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcaaccgagaacatgacttaaaattaaagtttaagtcttctaagaaactaaaa
atatctgccaccttcgagtctatggatctgaaagagggtttattgcgaggcatatattcg
tatggctttgaagcaccatctgctattcagtctagagctataacacaaattatttccggc
aaagatgttattgcacaagcacagtccggtactggtaagactgcaacattcacgattggt
atgttgcaagctattgatctaaagaaacatgatttgcaagcactagttttatctccaact
agagaattggctgctcagattggtaaagttgtcacaaacttgggtgactacatgaacgtc
aaggcctatgcaatgactggaggtaaaactatgaaagatgatttgaagaaaattcaaaag
catggttgccaagtcattagtggtacaccaggaagagttctagatatgataaaaagacga
ttgatagagactagacatgtccagattttagttttggatgaagctgatgaacttctcagc
gatacactgggtttcaaacaccaaatttatgatatcttcactaaattgccaagaacttca
caagtggtggttgttagtgccaccatgagtcctgaaattcttgaaataactaagaaattt
atgaatgatcctgtcaaaattttggttaaaagagatgagataacactggaaggcattaag
caatactacgttaatgtcgaaaaagaagaatggaaatttgatacattgtgtgatatttac
gactccctaacaattactcagtgtgttatattttgtaatagtaaaaaaaaggtagactgg
ttagcgcacaagctaaaacaatccaattttgcagttatctccatgcatggtgatatgaag
caagatgagagagatagagttatgaatgaatttagaacaggccaatcccgggtactgatt
tcgaccgatgtatgggcgaggggtattgatgtacagcaagtatcattggtaataaattat
gatttaccggaaatcacagaaaactatgttcatagaattggtagaagtggaagatttgga
agaaaaggtgtggcaattaatttcctaacaaaaattgatgcctcgcgtatgaaggagata
gagaaatattataagattaaagttaagccaatgccagctgacttatcagaactttcctag
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