Nakaseomyces glabratus: CAGL0F07139g
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Entry
CAGL0F07139g CDS
T01024
Name
(RefSeq) uncharacterized protein
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
cgr
Nakaseomyces glabratus
Pathway
cgr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cgr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CAGL0F07139g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgr03041
]
CAGL0F07139g
03009 Ribosome biogenesis [BR:
cgr03009
]
CAGL0F07139g
Enzymes [BR:
cgr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CAGL0F07139g
Spliceosome [BR:
cgr03041
]
Complex A
U2 snRNP components
U2 related factors
CAGL0F07139g
Complex B
CAGL0F07139g
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
CAGL0F07139g
Ribosome biogenesis [BR:
cgr03009
]
Eukaryotic type
90S particles
Helicases
CAGL0F07139g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
DEAD
Helicase_C
HA2_N
AAA_22
AAA_19
SRP54
Flavi_DEAD
AAA_23
ResIII
nSTAND3
AAA_7
ABC_tran
AAA_30
Motif
Other DBs
NCBI-GeneID:
2887645
NCBI-ProteinID:
XP_446279
UniProt:
Q6FU15
LinkDB
All DBs
Position
F:complement(698363..700669)
Genome browser
AA seq
768 aa
AA seq
DB search
MGSKRRFSGSQHEHADPVATSIPEHAAEIAEDLTKKHPIPPEEPLVHHDAGEFNGLVRHK
TTVEQANKLETGKINPFTGNQFSEKYFGILKVRKDLPVHAQRAEFLKIYQENQIMVFVGE
TGSGKTTQIPQFVLFDEMPHLENTQIACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIR
FENKTSNKTILKYMTDGMLLREAMEDHDLKRYSCIILDEAHERTLATDILMGLIKQVVLR
RPDLKIIVMSATLDAEKFQNYFHNAPLLAVPGRTYPVELYYTPEFQRDYLDSAIRTVLQI
HATEEAGDILLFLTGEDEIEDAVRKISLEGDQLVREEGCGPLSVYPLYGSLPPHQQQRIF
EPAPESHNGRPGRKVVVSTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPIS
KASAQQRAGRAGRTRPGKCFRLYTEEAFQKELIEQSYPEILRSNLSSTVLELKKLGIDDL
VHFDFMDPPAPETMMRALEELNYLACLDDEGNLTALGRLASQFPLDPMLAVMLIGAFEFK
CSQEILTIVAMLSVPNVFIRPSKDKKRADDAKNIFAHPDGDHITLLNVYHAFKSDEAYEY
GINKWCRDHYLNYRSLSAADNIRSQLERLMIRHNLELNTTDYESPQYFDNIRKALAAGFF
MQVAKKRSGGKGYITVKDNQDVLIHPSTVLGHDAEWVIYNEFVLTSKNYIRTVTSVRPEW
LIELAPAYYDLDNFQKGDVKLSLERIQEKVERMKELKKGKDKKKSKKK
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgggttctaagagaagattttcaggttcgcagcatgaacatgctgatccagttgcaacc
tcgattcccgaacatgcagctgagatagccgaggatttgacaaagaagcaccctattcca
ccggaggaaccacttgttcatcatgatgcgggcgagtttaacggcctagtacgtcacaag
actactgttgaacaggctaacaagttagagactggtaaaatcaacccattcacaggtaac
caattcagtgagaaatactttggtattctgaaagtgagaaaagatcttccggttcatgca
cagagagctgagtttctaaagatttaccaggagaaccagattatggtctttgttggtgaa
actggttccggtaagaccactcaaatcccacaatttgtattgttcgatgagatgccccac
ttagaaaacactcagattgcatgtacccagcctcgtcgtgttgctgcaatgtctgttgca
caaagagttgctgaagaaatggatgtcaagttaggtgaagaggttggttactctatcaga
tttgaaaacaagacctccaacaagactatattgaaatatatgacagacggtatgttattg
agagaagctatggaggaccatgacctaaagagatactcatgtattattctagatgaagcg
cacgaacgtactttggcaacagatattttaatgggtttgatcaagcaagttgtgttaaga
agacctgatttgaagattattgtcatgtctgctactttagatgccgaaaaattccaaaac
tacttccataacgctcctttactggccgttccaggtagaacatacccagttgaattgtac
tatactccagaatttcaaagagattacctggattctgccatccgtactgttttgcaaatt
catgctacagaggaagctggtgatatacttctcttcttaactggtgaagatgaaattgaa
gacgcagttaggaagatatctctagaaggtgatcaattggttagagaagaaggctgcggg
ccactttcggtttatcccctatacggttcattaccacctcatcaacaacaaagaattttt
gaacctgcacctgaatcacataatggtagacctggtagaaaggttgtcgtttccacaaat
attgcagaaacatcgttgaccattgacggtattgtttatgttgttgacccaggtttctca
aaacaaaaggtgtataatcctagaataagggtcgaatctttgttggtttcaccaatttct
aaggcttctgctcaacaaagagctggtagagcaggtcgtactagaccaggtaagtgtttc
agactatatactgaagaagcatttcaaaaggagcttattgaacaaagttacccagaaatt
ctacgttcaaacttgtcatcaaccgttttggagttaaagaaactaggtatcgatgacttg
gtccatttcgatttcatggacccaccagctccagagacaatgatgagagcgttggaagaa
ctaaattatcttgcctgtcttgatgacgaaggtaatctgaccgccttaggtagacttgca
tcacaattcccattggatccaatgctggctgtaatgctaattggtgcttttgaattcaag
tgttcccaggagatattaacaattgttgctatgctttctgttcctaatgtattcatccgt
ccatctaaggacaagaagcgtgctgatgacgccaagaacatttttgctcacccggatggt
gaccacattactcttctaaatgtctaccatgctttcaagtcagacgaagcgtatgagtac
ggtatcaataagtggtgtcgtgaccattacttgaattacagatccctatcggcagctgat
aacatccgttcacagttggaaagactaatgatacgtcataacttagagctaaacactact
gattatgagagccctcaatattttgacaacatcaggaaggcactggctgcaggtttcttt
atgcaagtcgcgaagaagagatccggtggtaagggttacattacagttaaggacaaccag
gacgtattaatccacccaagtacggtgttgggccacgatgcagagtgggttatttacaat
gaatttgtgcttacatcaaagaattatattaggacagtcacctcggtaagacctgaatgg
ttgatcgaactggcaccagcatattacgatctagacaacttccaaaagggtgatgtcaag
ctttcattggaaagaatccaagagaaggtagaaagaatgaaggaactcaagaaaggtaag
gataaaaagaaaagcaagaagaaataa
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