Nakaseomyces glabratus: CAGL0J08349g
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Entry
CAGL0J08349g CDS
T01024
Name
(RefSeq) uncharacterized protein
KO
K12609
CCR4-NOT transcriptional complex subunit CAF120
Organism
cgr
Nakaseomyces glabratus
Pathway
cgr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cgr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CAGL0J08349g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgr03019
]
CAGL0J08349g
Messenger RNA biogenesis [BR:
cgr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
CAGL0J08349g
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PH
PH_9
Motif
Other DBs
NCBI-GeneID:
2889704
NCBI-ProteinID:
XP_448072
UniProt:
Q6FNX2
LinkDB
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Position
J:complement(829222..832233)
Genome browser
AA seq
1003 aa
AA seq
DB search
MKRIFSGSKSPDGLPKSPINSPNIGKSILKTSGTFNQDNLTSKSAVSPELVPILTLLTAH
THRRYHEGVLLFLQDLKGDGSVGGRKWKEVYAVLIGTQLALWDAQELAELNQAERLDVNK
VSAKLKEAVSKPTYINFTDSTIKPLGAGDRAVTESGKKLENVLIVSSTLKNRYFLQFSNK
DSFNEWHAALRLSLYECASLQMAYTGAFLSSRGAKLSDIKVLLADVKYDYEDWVSVRFGA
GMPWKRCYAVISQPTKKNSLGEINFYESDKKIKKSNSMAKVISAEFLYAIYPSAVQLIDD
STIIKLEGKISFNKKEDPQDTTVFIMPEKHNAVPGYDTVIRFLLPAFNAFKLYGRPKKLK
ADKRDQDSLIFALPVLPHIYYLEVSDLIQLSSSMSSIGWDNREWWNQIRGVLQRKLNEGS
SGCGSIVEASTFLGSPLLGSNDLFDTSKSIASPRSVSQPLMSGKPGSASNSSESLTNSKD
RSRGSPSKGSNQRRIVSEKASSQAKPANYVPTIPPLPNNQNQRNFQPSVPAQHINNARDT
NKSGKPRDLNIVDSNFNAYGKDHLTVKQDDSKKLSVASDLASLIEKYSDDELEHMTGNEV
QGRNYNKLDRRFNDANPRQRGENDASSDEISEMARSINEFGFEHPQKVMKGNFGSSGTLP
IQDGPDESNLFDPDYLVQDEAMSIGHNDAYGDFNNPYSSKFKGELVSPKIGNNPLPYPAE
GGDTPTKQEKTSNNHLNAMENTNLPVNPYDKPKNIVPNKQAGYPSQSVQRPSNDLGNSAP
VKPGYANTRPNMHTPPPQGVRTGAPSGSYVSPNNKMGYANGPNPQQMYRPPAREQFNSGS
PNVRGNSSSPVIGQQSPMNPQQHNMRPPPGPGTNQMRMSPGSPNMPGQGYPPQQPPYPQN
MPMQRPMGGHPQNMPMPPYGYNNAPPNQMGGYGYNQRPGFGSPQYPMPNGGMPTGVQSAM
GRGPMPQWGQGQAPGGKQRAKVKGGFSQFMPPSNTATNPYSNQ
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaattttttctggttcaaagtcaccggatgggctgccaaaatcgccaatcaat
agtcccaatataggcaagtcaattttaaaaacgtcaggcacattcaaccaagataatttg
acctctaaatcagccgtttctccagaactggtgcctattttaacgctattaacagcgcat
actcacagaagatatcatgaaggtgtattattatttttacaagatctaaaaggtgatggt
tctgttggtggccgtaaatggaaagaagtatacgcggtgcttataggtacgcaattagcg
ctatgggacgctcaagaattagcagaactcaaccaagctgagaggttggatgtaaataaa
gtctctgctaaactaaaagaagctgtatcaaagcccacgtacataaactttacagattct
actataaagcctttaggtgctggtgatagagcagtcacggaatctggcaagaagctagaa
aatgttcttattgtatcttcaacgttaaagaacaggtatttcttacaatttagtaataag
gattcgtttaatgaatggcatgctgcgctaagattatctctttacgagtgtgcttcatta
caaatggcttatacaggtgcgtttctttccagtagaggtgcgaaacttagcgatataaag
gtgctgctagctgatgtgaagtatgattatgaagattgggttagcgtcagatttggcgca
ggtatgccctggaaaagatgttatgccgttatttctcaacctacaaagaaaaactcactt
ggagaaataaatttctatgagagtgataagaaaataaagaagtcaaactctatggcgaaa
gttatctctgcagagtttttatatgctatttatccttcagcagtacaactgatagatgat
tctacgatcattaaattagaaggaaaaataagcttcaataaaaaggaggatccgcaagat
actacggtatttataatgcctgagaagcataatgctgttccaggctatgatactgtcatt
aggtttttattaccagcattcaatgcatttaaattatatggtagacctaaaaagcttaaa
gcggataagcgggaccaagactcccttatttttgcattacctgttctaccgcatatttat
tacttagaagtttcagatctgattcaactgtctagttcaatgagctccataggttgggat
aatagagagtggtggaaccaaataagaggggtattacaaagaaagttaaatgaaggttct
tccggttgtggatcaattgtagaagcttctactttcttagggtcacctttgcttggatca
aacgatctatttgacactagtaagtcaattgcttcacctagatcagtatcacagccatta
atgtctggtaaaccgggctctgcttcaaattcatctgaaagcttaacaaattccaaagac
aggagtaggggctcaccatcaaaaggctctaaccaacgtcgcatcgtttcagaaaaagca
tcatcacaagcaaagcctgcgaactatgtacccacaattccacctcttccaaataatcaa
aaccagagaaacttccaaccttctgtaccagcacagcatattaataatgctagagacacg
aacaagagtggcaaaccaagagatttaaatattgtcgattcgaacttcaacgcatatggc
aaggaccatctaactgtcaagcaagatgattccaaaaaactgtccgttgcttctgactta
gcctcactaattgagaaatattctgacgatgagctcgaacacatgacaggcaatgaagtc
caaggcaggaactacaataagttagatcgtcgtttcaatgatgccaatccaaggcagaga
ggtgaaaatgatgctagctctgatgaaattagtgaaatggcaaggagtataaacgagttt
ggatttgaacatccgcagaaagtaatgaaaggaaatttcgggtctagcggtacactacca
attcaggatggcccagacgaatctaatctttttgatcctgattacttggtccaggatgaa
gcgatgtcgataggtcacaatgatgcatatggcgatttcaacaatccttacagttcaaaa
ttcaaaggtgaactagttagtccaaagattggaaacaatccactaccataccctgctgag
ggaggcgataccccaaccaaacaggaaaagacttcaaataatcatctcaatgcgatggaa
aatacaaatctacccgtcaatccttatgataaaccaaagaatatcgtacctaacaaacaa
gcaggatacccatcacaaagcgtgcaaagaccaagtaatgatcttgggaatagtgcacct
gttaagccaggatatgccaataccagaccaaatatgcatacaccgccgccacaaggcgta
aggacaggcgcaccaagtggcagttatgttagccctaataacaagatgggatatgcaaat
ggtcccaatccacagcaaatgtacagaccacctgcgagagaacaattcaacagtggttca
cctaacgtgagaggaaattcttcctcaccagtaattggtcagcaaagtcctatgaatccg
caacagcacaacatgcgccccccacctggccctggtaccaaccagatgcgtatgtcgcct
gggtctccaaacatgcctggacaaggctacccacctcagcagccaccttatccacagaac
atgcctatgcaaagacccatgggtggccacccacagaacatgcccatgcctccgtatggc
tacaacaatgccccaccaaaccaaatgggtgggtatgggtacaatcagagaccagggttc
ggcagcccacagtatcctatgcctaatggcggcatgccaacgggtgttcagagcgccatg
ggccgtggacccatgccccaatggggccagggtcaagctccaggtggcaagcagagagcc
aaggtgaaaggcggtttttcgcagttcatgccaccatccaacacagctacgaatccatac
tccaaccagtaa
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