Entry |
|
Symbol |
gyrB
|
Name |
(GenBank) DNA gyrase, subunit B
|
KO |
|
Organism |
cgra Campylobacter gracilis
|
Brite |
KEGG Orthology (KO) [BR:cgra00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:cgra03032]
CGRAC_0003 (gyrB)
03400 DNA repair and recombination proteins [BR:cgra03400]
CGRAC_0003 (gyrB)
Enzymes [BR:cgra01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CGRAC_0003 (gyrB)
DNA replication proteins [BR:cgra03032]
Prokaryotic type
DNA Topoisomerases
CGRAC_0003 (gyrB)
DNA repair and recombination proteins [BR:cgra03400]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CGRAC_0003 (gyrB)
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SSDB |
|
Motif |
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Other DBs |
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LinkDB |
|
Position |
2575..4887
|
AA seq |
770 aa
MKQNYGASNIKVLKGLEAVRKRPGMYIGDTNIGGLHHMIYEVVDNSIDEAMAGYCDTIDV
EITSEGSCIVSDNGRGIPVDIHPTEKIPAATVVLTVLHAGGKFDKDTYKVSGGLHGVGVS
VVNALSKKLVATIKRDGNIYRQEFAKGIPTTELEKIKTTNRTGTTIEFWPDGEIFEILEF
DDEILSKRFRELAYLNPKITINFKDNRTGRDEHFHFEGGLESFVNDMNKAPAISKAVSFS
DSADDVMVDFALMYNETYNENLLSFVNNIKTPDGGTHEAGFRAGLTRAITNYVAANAAAR
EKDTKITGDDVREGLIAVISVKVPEPQFEGQTKGKLGSSYVKPIVQKMAFEVLSKYFEEN
PIEARAIMNKALLAARGREAAKKARDLTRKKDNINSVGTLPGKLADCQSKDASISEIYLV
EGDSAGGSAKQGRDRVFQAILPLRGKILNVEKARLDRILQSEEIKNMITAFGCGIGEEFN
EEKLRYHKIIIMTDADVDGSHIQTLLLTFFFRFLRPIVENGYVYLAQPPLFRYKKGKKEI
YLKDEKALSEFLIETGIDMGEFEGIGNEDLIDYLKIVSNYRSLLNELKKRFSVLSAIRFL
IENDEARSLGYEELFKILKPRLESEGFNILNSYVNDEGIRIYVQTPSGLEQLVIDENLFG
NYIFEEAIRIYSKIKDRDVNFGKDFIEILDEIEKSSKKGAYIQRYKGLGEMNPEQLWETT
MSPENRRLLKISIADAQSASDTFNLFMGDEVEPRRNYIQDHAKDVKHLDI |
NT seq |
2313 nt +upstreamnt +downstreamnt
atgaagcaaaattacggcgctagtaatattaaagttttaaaaggtcttgaagccgttaga
aagcgtcccggaatgtatattggagataccaatatcggcggacttcaccatatgatctac
gaggtagtggataactcgatcgacgaggcgatggcaggttactgcgacacaatcgatgtc
gagatcactagcgagggaagttgtatcgttagtgataacggtcgtgggattcccgtcgat
atacatccgaccgaaaaaattcctgccgcgacggtagttttaaccgtgcttcacgcaggc
ggtaaatttgacaaagacacttacaaagtctccggcggtctgcacggcgtgggtgttagc
gtcgtaaatgcgctttcaaaaaagcttgtcgctacgatcaaacgtgatggaaatatttat
agacaagaatttgccaaaggaattcctactaccgagcttgaaaagataaaaactactaat
cgcacgggcactacgatcgagttttggcccgacggcgaaatttttgaaattttagaattt
gacgatgaaattttatcgaaaagatttcgcgagctagcgtatctaaatccaaaaattacg
ataaattttaaagataatcgtacgggcagggacgagcattttcactttgaaggcggtttg
gaaagctttgtaaacgatatgaataaagcgcctgccatatccaaagccgtatcgtttagc
gatagcgcggatgatgttatggtggattttgcgcttatgtataacgaaacgtataacgaa
aatttactaagcttcgtaaataatatcaaaactccggacggcggtacgcatgaggcggga
tttagagcgggtcttactcgcgcgataacaaattacgtcgcggcaaatgcggctgcgcgc
gaaaaggacacgaagatcaccggcgacgacgttcgcgagggacttattgcggtaattagc
gttaaggttcccgagccgcagtttgagggacagactaaaggtaagctgggctccagctat
gttaaaccgatcgtgcaaaagatggcgtttgaggtacttagcaagtattttgaagaaaat
ccgatcgaagcgcgcgccattatgaataaggcccttttagctgcgcgcggtcgcgaagcg
gcgaagaaggcgcgcgatctaacgcgcaaaaaagataatataaattccgtcggaaccctt
cctggaaagttagccgattgccagagtaaggatgcgagtattagcgaaatttatctagta
gagggcgatagcgcgggcggttcggcgaagcagggaagagatcgcgtgtttcaagcgatc
ctgccgcttagaggtaaaattttaaacgtagaaaaggcgcgcctggatagaattttacaa
tcagaagagattaaaaatatgatcacggcctttggctgcggtataggcgaggaatttaac
gaagaaaagctccgctatcataaaatcatcattatgaccgatgcggacgtcgacggtagc
cacatccagacgctgcttctaacatttttctttaggtttttgcgacctatcgtagaaaac
ggctatgtttatctggcacagccgccactttttagatataaaaagggcaaaaaagaaatt
tatctaaaagacgaaaaggcgcttagcgagtttttgatcgaaactggcatcgatatgggc
gagtttgaaggcatcggtaacgaggatctgatcgattatctaaaaatcgtctcaaattat
cgctcgcttctgaatgagcttaaaaagcgttttagcgtgcttagcgcgatcagatttttg
atagaaaatgacgaagcgcgaagcctcggctatgaggagttatttaaaattttaaaacca
cgcctggaaagcgaaggatttaatatcttaaattcctacgtaaatgatgaaggcattaga
atttacgtccaaactccgagcggtttagaacagcttgtgatagatgagaatttattcggc
aattatatctttgaagaggcgatcagaatttattcgaagatcaaagatcgagatgtaaac
tttggcaaggattttattgaaattttagatgaaatcgaaaaaagctcgaaaaaaggcgct
tatattcagcgctataaaggtcttggagagatgaatccggagcagctttgggaaactact
atgagccctgaaaatagaaggcttttaaaaatcagcattgcagacgcacaaagtgctagc
gatacctttaatctcttcatgggtgacgaggttgaaccgcgtaggaactacatccaagat
catgccaaagacgttaaacacttggatatataa |