Campylobacter gracilis: CGRAC_0354
Help
Entry
CGRAC_0354 CDS
T04020
Name
(GenBank) PAS domain-containing diguanylate cyclase / phosphodiesterase
Organism
cgra
Campylobacter gracilis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GGDEF
EAL
PAS_9
PAS_3
PAS_8
PAS
PAS_4
Motif
Other DBs
NCBI-ProteinID:
AKT91821
LinkDB
All DBs
Position
327140..331207
Genome browser
AA seq
1355 aa
AA seq
DB search
MKNKKDFVTERFNAALILGAALLTLVVVCEISFLRTRIATQLDLRTRTAITLLKNTDESL
FSELEILKETILSLDARHEAMQSKLYADLIRNVVKSSHRFDAIFYLRARGAEQESLAHFS
SDARISDLGEIRLADIAGELKKDEWVSRYMMMDGAWRYFLIKRVNADSYLLGFANTARPI
ARLSSLGDILVFNAEGKFFNAPGSVTDILGQDFDFSRLGEVVSFEDESGLSFAYLAKFGD
NFVMAHERAGYFLGADDFIVVALAAAILAYLILLISNFTFLKKRVFIPLAAVQNALRQGD
YHSKIRDIEALNPLSSVLEISKSIDEVLKSNLRHGDFSLSFKDALKYSSLSVLSIDNVAG
TIESASNGARELYGDDVVGRNIFALQAGSFYDHAYQTQRANYVKENYVVTRQETKNGVKD
LYVKKSYIRDGSKISTLFVVLDASKYRRFYDETKQKYEYLNHAPIVTLVFDYTSGKIVDA
SKNIKELWGYEAAQFLSGEIRLWDLLDEKDANEAKNEILNRLADMPAEELSFSQSYKIRH
NDNIRYSYEVSIYVKKSAARAAFYFQNIDDDVKAIRGLQEDLDFYRTVIETRNFCTCLID
LDAQTLSFDKNYFKILKYRGKRLNTAMSFGEFSYEIYFADLENFNKMIRECTAGLRSDFS
CEFRLRNAANAYTWISMQGYVTEKHGSRSRLVKTTLEDISSRKQTELELNLNANVFSRSL
EAILITDESGRVLRANNAFYEITGYSESQTIGKIPNFFAPTEGGADVMERIRKNLVGKQT
SYKDEIYGLKRGGGTFPALFTAIAIKDDFSLTSNFILMFTEISQIKQKESELAKIAHHDA
LTGLPNRVYFMKAAQRFTANSGENSKLMAVLFIDFDGFKAINDTYGHEVGDMFLQAISKA
MSGLLRKGDILARLGGDEFGAIIGDLQSKDAAHVLLDRLLGISKMKFNLKGNEISASISV
GAAFYDGSEKIDFPGLLSRADRAMYRAKTSGKNRYCIFERAEADGPSEEGIAAAIEEGEF
FVLYQPIISGAQIYGYELLLRWDRGKRGILAPQDFAQILSEPRFELPISKFAFSKMMEFN
AQTGANCSINVSLAVLTNDEFYDFVAHSLRDRANAKGELMFEITDFSEQNFKEFAPARGR
YADLGIKFALNSANKNNIPFLNAQPFDIVKIDRELCLDIGKKKNAIRTMVEITGKLKREF
GFALGAQGVENALSLRLLNNLKFNYLQGNFIAKALDRKEIDAFIARFKDTPKLAAIDKDE
FISFLNALDYKELALGFIARGQTGELSPGEFESFRAKFGEILNKTQSAGSEKFALNTEIR
KQILDILSLDYRALVSFIQSFKTRLNQFISDLEAA
NT seq
4068 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacaaaaaagacttcgttaccgaaagatttaacgccgccttgattctaggcgct
gcgctgcttacgcttgtagtagtttgcgagattagctttttgcgcactaggatcgctacg
cagcttgatttgcggacgcgcacggcgattactttacttaaaaataccgacgagtcgctt
tttagcgagcttgaaattctaaaagaaactatcctttctttagacgcaaggcacgaagct
atgcaaagcaagctttatgcggatttgatccgtaatgtcgtaaaatcttctcatagattt
gacgctattttttatctacgcgcccgcggcgcggaacaggagagcttagcacatttttca
tcggatgcgcgtatttcggatcttggcgagatacggcttgcggatatcgcaggcgagcta
aaaaaggatgaatgggtatcgcgctatatgatgatggacggggcgtggcggtatttttta
atcaagcgtgtaaatgctgattcatatctgctaggttttgccaacaccgctaggccgatt
gccagactctcttcgctgggagatattttggtctttaatgccgaaggtaaattttttaac
gctcctggcagcgtaaccgatatattagggcaggattttgatttttcgcgtctaggcgaa
gtggtgagctttgaagacgaatctgggctaagctttgcatatcttgcgaaatttggggat
aattttgtaatggctcacgaacgagccggctattttttaggcgcggacgattttatcgtc
gtagcgctagcagcagcgattttagcttatttaatccttctaatttcaaattttacgttt
ttaaaaaagcgcgttttcatcccgctagcggcagttcaaaacgctctgcgccaaggggat
taccactccaaaattcgcgatatagaagcgctaaatccgctaagctccgtcttagaaatt
tctaaatccatagatgaggttttgaagtctaatctgcgccacggcgattttagcctcagc
tttaaagatgcgctaaaatacagctctctttcagtgcttagtatcgataacgttgcaggt
acgatcgaaagcgctagcaacggcgcacgcgagctttatggcgatgacgtcgtgggacgg
aatatcttcgcgctgcaagcaggctcgttttacgatcacgcctatcaaacccagcgcgca
aactatgtcaaagaaaactacgtcgtaacccgccaagagaccaaaaacggcgttaaagac
ctctatgttaaaaaatcttatatccgcgacggaagtaaaatttcaaccctttttgtggtg
ctggatgcgtcaaaatatcgcagattttacgatgaaactaagcaaaaatatgagtattta
aatcacgcgcctatcgttacgctagtgtttgactacacttcgggcaagatcgtagatgct
agcaaaaatataaaagagctttggggctacgaagcggcgcagtttttaagcggcgagata
aggctatgggatttgctggatgaaaaggacgcgaatgaggctaaaaatgaaattttaaac
cgcttagccgatatgcccgcagaagagctaagcttttctcaaagctataaaattcgccac
aatgacaatatccgctatagctacgaagtgagcatctatgtcaaaaagtccgccgccagg
gctgcgttttattttcaaaatatcgatgacgatgttaaggcgatccgcggcttgcaggag
gatttggacttttatcgcaccgtaatcgagactaggaatttttgcacctgcttaatcgat
cttgatgcgcagacgctgtcgtttgataaaaattactttaaaattttaaaatatcgcggc
aaaagactaaatactgcgatgagctttggggagtttagttatgaaatttacttcgcggat
ttagagaatttcaataaaatgatccgcgaatgcaccgccgggcttaggagcgattttagc
tgcgaattccgtctgcgaaatgccgctaatgcctatacttggatcagtatgcaaggctac
gtcaccgaaaagcacggctctcgctcgcgccttgtaaaaactacgctcgaagatatcagc
tcgcgcaagcagacggagctggagttaaatttaaacgctaatgtcttttcgcgctcgcta
gaggcgatcttaatcacagatgagagcggtcgcgtgctgcgcgctaataacgccttttat
gaaatcaccggctatagcgaaagccaaaccatcggcaaaattccaaatttcttcgctcct
acagagggtggagcggacgtgatggagaggattagaaaaaatctcgtcggcaaacagacc
tcttacaaagatgaaatttacggactaaaaagaggtggtggcacctttcctgcgctattt
acggcaattgcgataaaggatgatttttcgcttacttcaaatttcatcttgatgtttacc
gaaatttcgcagatcaagcaaaaagagagcgagctagccaagatcgcccatcatgacgcg
cttactgggcttccaaatagagtgtattttatgaaggctgcgcagagatttacggcaaac
tcgggcgaaaattccaagcttatggcagtgcttttcatcgattttgacggctttaaggcg
atcaacgacacctacgggcacgaggtcggcgatatgtttttacaagcgatctcaaaggcg
atgagcgggctgctgcgtaaaggtgatattttagcgcgcctaggcggtgatgagtttggc
gccatcatcggcgatctgcaaagcaaggacgccgcgcatgtgctattagatcgcctgctt
gggatttcaaagatgaaatttaacctcaaaggcaatgaaatcagcgcaagcatcagcgtt
ggcgcagcattttacgacggcagcgaaaagatcgattttccaggacttttatcgcgcgcg
gatagggcgatgtatcgcgccaaaacgagcggtaaaaaccgctactgcatctttgagcgc
gctgaagcagacggacctagcgaagaagggattgctgcagcgatcgaagagggggagttt
ttcgtgctctatcagccgatcattagcggcgcgcagatttacggatatgagctgctttta
cgctgggatcgcgggaagcgcggaattcttgctccgcaggattttgcgcagatattaagc
gagcctcgatttgaattgccaatctcaaaatttgcgttttcaaagatgatggaatttaac
gctcaaacaggcgcaaactgctcgataaacgtaagtttagccgtgcttacaaacgacgaa
ttttacgatttcgtagctcacagcttgcgagacagggctaatgcaaaaggcgagttgatg
tttgagataaccgattttagcgagcaaaattttaaggaattcgcccctgcgcgtgggcgt
tatgcagatcttgggattaaatttgcccttaatagtgcaaataaaaataatatcccattc
ctgaatgcccagcctttcgatatcgttaaaatcgaccgcgagctctgccttgacataggc
aagaaaaaaaatgctatccgaacgatggtggagatcacaggcaagctaaagcgggagttt
ggatttgctctcggcgctcaaggggtcgaaaacgcgctatcgctgcgacttttaaataat
ctaaaatttaactatcttcagggaaattttatcgcaaaagcgctggatcgcaaggagata
gacgctttcatcgcgcgatttaaagatacgccgaagctcgcagccatcgacaaagatgag
tttatcagcttcttaaacgcgcttgattacaaagagcttgctttaggcttcatcgcgcgc
ggtcaaacgggcgagcttagcccgggagaatttgaaagctttagagcgaaattcggcgaa
attttaaataaaactcaaagcgcgggcagcgaaaaatttgcgctaaatacagaaatacgt
aagcaaattttagatattctttcgcttgattatcgcgctttagtaagcttcattcagagc
tttaaaacgcggctgaatcagttcataagcgatttggaggcagcatga
DBGET
integrated database retrieval system
